RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 OR1L1Q8NH94 360 aa14.41□□□□□ -0.1
PTPRA-205ENST00000399903 NAT8BQ9UHF3 227 aa14.41□□□□□ -0.1
PTPRA-205ENST00000399903 ATP23Q9Y6H3 246 aa14.41□□□□□ -0.1
PTPRA-205ENST00000399903 SYNGR1O43759 233 aa14.41□□□□□ -0.1
PTPRA-205ENST00000399903 IL11RAQ14626 422 aa14.41□□□□□ -0.1
PTPRA-205ENST00000399903 VHLLQ6RSH7 139 aa14.41□□□□□ -0.1
PTPRA-205ENST00000399903 MKXQ8IYA7 352 aa14.41□□□□□ -0.1
PTPRA-205ENST00000399903 IMMP1LQ96LU5 166 aa14.41□□□□□ -0.1
PTPRA-205ENST00000399903 C19orf67A6NJJ6 358 aa14.4□□□□□ -0.1
PTPRA-205ENST00000399903 CER1O95813 267 aa14.4□□□□□ -0.1
PTPRA-205ENST00000399903 PROK2Q9HC23 129 aa14.4□□□□□ -0.1
PTPRA-205ENST00000399903 CRIM1Q9NZV1 1036 aa14.4□□□□□ -0.1
PTPRA-205ENST00000399903 COL5A1P20908 1838 aaPredicted RBP14.4□□□□□ -0.1
PTPRA-205ENST00000399903 A0A096LPE4 126 aa14.4□□□□□ -0.1
PTPRA-205ENST00000399903 A0A1W2PPZ6 126 aa14.4□□□□□ -0.1
PTPRA-205ENST00000399903 WNT2P09544 360 aa14.4□□□□□ -0.1
PTPRA-205ENST00000399903 RFPL3SP0C7P2 107 aa14.4□□□□□ -0.1
PTPRA-205ENST00000399903 FOLR3P41439 243 aa14.4□□□□□ -0.1
PTPRA-205ENST00000399903 SSR4P51571 173 aa14.4□□□□□ -0.1
PTPRA-205ENST00000399903 UBE2NP61088 152 aaKnown RBP14.4□□□□□ -0.1
PTPRA-205ENST00000399903 NTN3O00634 580 aaPredicted RBP14.4□□□□□ -0.11
PTPRA-205ENST00000399903 SYNGR3O43761 229 aa14.4□□□□□ -0.11
PTPRA-205ENST00000399903 LINC00310P59036 64 aa14.4□□□□□ -0.11
PTPRA-205ENST00000399903 CEACAM16Q2WEN9 425 aa14.4□□□□□ -0.11
PTPRA-205ENST00000399903 KRTCAP3Q53RY4 240 aa14.4□□□□□ -0.11
PTPRA-205ENST00000399903 LCN12Q6JVE5 192 aa14.4□□□□□ -0.11
PTPRA-205ENST00000399903 LYG1Q8N1E2 194 aa14.4□□□□□ -0.11
PTPRA-205ENST00000399903 FGFRL1Q8N441 504 aa14.4□□□□□ -0.11
PTPRA-205ENST00000399903 PARD6GQ9BYG4 376 aaPredicted RBP14.4□□□□□ -0.11
PTPRA-205ENST00000399903 SELENOKQ9Y6D0 94 aa14.4□□□□□ -0.11
PTPRA-205ENST00000399903 NBEAQ8NFP9 2946 aa14.39□□□□□ -0.11
PTPRA-205ENST00000399903 PTPRZ1P23471 2315 aaPredicted RBP14.39□□□□□ -0.11
PTPRA-205ENST00000399903 SCO2A0A1W2PP80 73 aa14.39□□□□□ -0.11
PTPRA-205ENST00000399903 PCNX2A6NKB5 2137 aa14.39□□□□□ -0.11
PTPRA-205ENST00000399903 ZG16O60844 167 aa14.39□□□□□ -0.11
PTPRA-205ENST00000399903 Q0VFX4 171 aa14.39□□□□□ -0.11
PTPRA-205ENST00000399903 ATP6V1FQ16864 119 aa14.39□□□□□ -0.11
PTPRA-205ENST00000399903 HLA-DRB5Q30154 266 aa14.39□□□□□ -0.11
PTPRA-205ENST00000399903 PRR31Q5SQ13 230 aa14.39□□□□□ -0.11
PTPRA-205ENST00000399903 SLC23A3Q6PIS1 610 aa14.39□□□□□ -0.11
PTPRA-205ENST00000399903 CENPVQ7Z7K6 275 aaPredicted RBP14.39□□□□□ -0.11
PTPRA-205ENST00000399903 SAXO1Q8IYX7 474 aa14.39□□□□□ -0.11
PTPRA-205ENST00000399903 CEP250Q9BV73 2442 aa14.39□□□□□ -0.11
PTPRA-205ENST00000399903 DKK1O94907 266 aa14.39□□□□□ -0.11
PTPRA-205ENST00000399903 VENTXO95231 258 aa14.39□□□□□ -0.11
PTPRA-205ENST00000399903 FAM27BQ5VT28 67 aa14.39□□□□□ -0.11
PTPRA-205ENST00000399903 OR4B1Q8NGF8 309 aa14.39□□□□□ -0.11
PTPRA-205ENST00000399903 OR2Y1Q8NGV0 311 aa14.39□□□□□ -0.11
PTPRA-205ENST00000399903 OCC1Q8TAD7 63 aa14.39□□□□□ -0.11
PTPRA-205ENST00000399903 UQCR10Q9UDW1 63 aa14.39□□□□□ -0.11
PTPRA-205ENST00000399903 CRYGSP22914 178 aa14.38□□□□□ -0.11
PTPRA-205ENST00000399903 PRDX4Q13162 271 aa14.38□□□□□ -0.11
PTPRA-205ENST00000399903 DAZAP2Q15038 168 aaPredicted RBP14.38□□□□□ -0.11
PTPRA-205ENST00000399903 OR8I2Q8N0Y5 310 aa14.38□□□□□ -0.11
PTPRA-205ENST00000399903 APOBEC3DQ96AK3 386 aaPredicted RBP14.38□□□□□ -0.11
PTPRA-205ENST00000399903 UHRF2Q96PU4 802 aa14.38□□□□□ -0.11
PTPRA-205ENST00000399903 LRFN3Q9BTN0 628 aa14.38□□□□□ -0.11
PTPRA-205ENST00000399903 NRN1Q9NPD7 142 aa14.38□□□□□ -0.11
PTPRA-205ENST00000399903 TRAPPC2LQ9UL33 140 aa14.38□□□□□ -0.11
PTPRA-205ENST00000399903 LOXL2Q9Y4K0 774 aa14.38□□□□□ -0.11
PTPRA-205ENST00000399903 ZIC3O60481 467 aa14.38□□□□□ -0.11
PTPRA-205ENST00000399903 YPEL1O60688 119 aa14.38□□□□□ -0.11
PTPRA-205ENST00000399903 LHX2P50458 406 aa14.38□□□□□ -0.11
PTPRA-205ENST00000399903 ST6GALNAC6Q969X2 333 aa14.38□□□□□ -0.11
PTPRA-205ENST00000399903 YPEL2Q96QA6 119 aa14.38□□□□□ -0.11
PTPRA-205ENST00000399903 HIPK2Q9H2X6 1198 aa14.38□□□□□ -0.11
PTPRA-205ENST00000399903 MTCH1Q9NZJ7 389 aa14.38□□□□□ -0.11
PTPRA-205ENST00000399903 SPENQ96T58 3664 aaKnown RBP14.38□□□□□ -0.11
PTPRA-205ENST00000399903 A0A0J9YW62 118 aa14.38□□□□□ -0.11
PTPRA-205ENST00000399903 hCG_38984A0A1B0GV85 526 aa14.38□□□□□ -0.11
PTPRA-205ENST00000399903 ZNF253O75346 499 aa14.38□□□□□ -0.11
PTPRA-205ENST00000399903 HYPMO75409 117 aa14.38□□□□□ -0.11
PTPRA-205ENST00000399903 PCSK4Q6UW60 755 aa14.38□□□□□ -0.11
PTPRA-205ENST00000399903 TMEM147Q9BVK8 224 aa14.38□□□□□ -0.11
PTPRA-205ENST00000399903 NPCDR1Q9BY65 106 aa14.38□□□□□ -0.11
PTPRA-205ENST00000399903 GNB4Q9HAV0 340 aa14.38□□□□□ -0.11
PTPRA-205ENST00000399903 TRBV20OR9-2A0A075B6H5 130 aa14.37□□□□□ -0.11
PTPRA-205ENST00000399903 CTXN2P0C2S0 81 aa14.37□□□□□ -0.11
PTPRA-205ENST00000399903 SELENOTP62341 195 aa14.37□□□□□ -0.11
PTPRA-205ENST00000399903 C10orf128Q5T292 105 aa14.37□□□□□ -0.11
PTPRA-205ENST00000399903 SRXN1Q9BYN0 137 aa14.37□□□□□ -0.11
PTPRA-205ENST00000399903 GAL3ST2Q9H3Q3 398 aa14.37□□□□□ -0.11
PTPRA-205ENST00000399903 NKX6-3A6NJ46 265 aa14.37□□□□□ -0.11
PTPRA-205ENST00000399903 RAMP3O60896 148 aa14.37□□□□□ -0.11
PTPRA-205ENST00000399903 SPINK14Q6IE38 97 aa14.37□□□□□ -0.11
PTPRA-205ENST00000399903 AAED1Q7RTV5 226 aa14.37□□□□□ -0.11
PTPRA-205ENST00000399903 ZNF738Q8NE65 137 aa14.37□□□□□ -0.11
PTPRA-205ENST00000399903 OR6C6A6NF89 314 aa14.36□□□□□ -0.11
PTPRA-205ENST00000399903 SRYQ05066 204 aa14.36□□□□□ -0.11
PTPRA-205ENST00000399903 WIPI1Q5MNZ9 446 aaPredicted RBP14.36□□□□□ -0.11
PTPRA-205ENST00000399903 FAM53AQ6NSI3 398 aaPredicted RBP14.36□□□□□ -0.11
PTPRA-205ENST00000399903 MRPL54Q6P161 138 aaKnown RBP14.36□□□□□ -0.11
PTPRA-205ENST00000399903 ASCL4Q6XD76 172 aa14.36□□□□□ -0.11
PTPRA-205ENST00000399903 TMEM144Q7Z5S9 345 aa14.36□□□□□ -0.11
PTPRA-205ENST00000399903 HES7Q9BYE0 225 aa14.36□□□□□ -0.11
PTPRA-205ENST00000399903 DEPPQ9NTK1 212 aa14.36□□□□□ -0.11
PTPRA-205ENST00000399903 CLDN15P56746 228 aa14.36□□□□□ -0.11
PTPRA-205ENST00000399903 KLF3P57682 345 aaPredicted RBP14.36□□□□□ -0.11
PTPRA-205ENST00000399903 FXYD3Q14802 87 aa14.36□□□□□ -0.11
PTPRA-205ENST00000399903 MRPL21Q7Z2W9 205 aaKnown RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms