RNA–Protein interactions for RNA: ENST00000298317.8

RPUSD4-201, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD4, Length 2,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-201ENST00000298317 ABCA7Q8IZY2 2146 aa11.35□□□□□ -0.59
RPUSD4-201ENST00000298317 APOBEC3DQ96AK3 386 aaPredicted RBP11.35□□□□□ -0.59
RPUSD4-201ENST00000298317 DLL3Q9NYJ7 618 aa11.35□□□□□ -0.59
RPUSD4-201ENST00000298317 LAMTOR2Q9Y2Q5 125 aa11.35□□□□□ -0.59
RPUSD4-201ENST00000298317 IGHV1OR15-9A0A0B4J2B8 117 aa11.34□□□□□ -0.59
RPUSD4-201ENST00000298317 LRRC30A6NM36 301 aa11.34□□□□□ -0.59
RPUSD4-201ENST00000298317 CCL3P10147 92 aa11.34□□□□□ -0.59
RPUSD4-201ENST00000298317 LGALS4P56470 323 aa11.34□□□□□ -0.59
RPUSD4-201ENST00000298317 KRTDAPP60985 99 aa11.34□□□□□ -0.59
RPUSD4-201ENST00000298317 FBLN7Q53RD9 439 aa11.34□□□□□ -0.59
RPUSD4-201ENST00000298317 KRTCAP3Q53RY4 240 aa11.34□□□□□ -0.59
RPUSD4-201ENST00000298317 CFAP161Q6P656 301 aa11.34□□□□□ -0.59
RPUSD4-201ENST00000298317 OCC1Q8TAD7 63 aa11.34□□□□□ -0.59
RPUSD4-201ENST00000298317 ZNF488Q96MN9 340 aa11.34□□□□□ -0.59
RPUSD4-201ENST00000298317 QTRT1Q9BXR0 403 aaKnown RBP11.34□□□□□ -0.59
RPUSD4-201ENST00000298317 ZNF552Q9H707 407 aaPredicted RBP11.34□□□□□ -0.59
RPUSD4-201ENST00000298317 RBM7Q9Y580 266 aaKnown RBP11.34□□□□□ -0.59
RPUSD4-201ENST00000298317 COX11Q9Y6N1 276 aa11.34□□□□□ -0.59
RPUSD4-201ENST00000298317 DOCK11Q5JSL3 2073 aa11.34□□□□□ -0.59
RPUSD4-201ENST00000298317 TRAV38-1A0A0B4J264 116 aa11.34□□□□□ -0.59
RPUSD4-201ENST00000298317 ODAMA1E959 279 aa11.34□□□□□ -0.59
RPUSD4-201ENST00000298317 RNF212BA8MTL3 300 aa11.34□□□□□ -0.59
RPUSD4-201ENST00000298317 ZG16O60844 167 aa11.34□□□□□ -0.59
RPUSD4-201ENST00000298317 MYF5P13349 255 aa11.34□□□□□ -0.59
RPUSD4-201ENST00000298317 GLB1P16278 677 aa11.34□□□□□ -0.59
RPUSD4-201ENST00000298317 HYAL1Q12794 435 aa11.34□□□□□ -0.59
RPUSD4-201ENST00000298317 GCSAMLQ5JQS6 135 aa11.34□□□□□ -0.59
RPUSD4-201ENST00000298317 MOB1BQ7L9L4 216 aa11.34□□□□□ -0.59
RPUSD4-201ENST00000298317 ZNF738Q8NE65 137 aa11.34□□□□□ -0.59
RPUSD4-201ENST00000298317 C19orf25Q9UFG5 118 aaPredicted RBP11.34□□□□□ -0.59
RPUSD4-201ENST00000298317 SAA2-SAA4A0A096LPE2 208 aa11.33□□□□□ -0.6
RPUSD4-201ENST00000298317 TRBV9A0A0B4J1U6 114 aa11.33□□□□□ -0.6
RPUSD4-201ENST00000298317 GJE1A6NN92 205 aa11.33□□□□□ -0.6
RPUSD4-201ENST00000298317 FCN1O00602 326 aa11.33□□□□□ -0.6
RPUSD4-201ENST00000298317 NBEAP1P0C6P0 100 aa11.33□□□□□ -0.6
RPUSD4-201ENST00000298317 THBS3P49746 956 aa11.33□□□□□ -0.6
RPUSD4-201ENST00000298317 HNRNPA3P51991 378 aaKnown RBP11.33□□□□□ -0.6
RPUSD4-201ENST00000298317 OCIAD2Q56VL3 154 aa11.33□□□□□ -0.6
RPUSD4-201ENST00000298317 STARD4Q96DR4 205 aa11.33□□□□□ -0.6
RPUSD4-201ENST00000298317 TBL2Q9Y4P3 447 aaKnown RBP11.33□□□□□ -0.6
RPUSD4-201ENST00000298317 ZNF407Q9C0G0 2248 aa11.33□□□□□ -0.6
RPUSD4-201ENST00000298317 SCO2A0A1W2PP80 73 aa11.33□□□□□ -0.6
RPUSD4-201ENST00000298317 SH2D1BO14796 132 aa11.33□□□□□ -0.6
RPUSD4-201ENST00000298317 RAMP3O60896 148 aa11.33□□□□□ -0.6
RPUSD4-201ENST00000298317 RPS16P62249 146 aaKnown RBP11.33□□□□□ -0.6
RPUSD4-201ENST00000298317 PSG7Q13046 419 aa11.33□□□□□ -0.6
RPUSD4-201ENST00000298317 HLA-BQ31612 363 aa11.33□□□□□ -0.6
RPUSD4-201ENST00000298317 Q6ZN92 141 aa11.33□□□□□ -0.6
RPUSD4-201ENST00000298317 ZDHHC16Q969W1 377 aa11.33□□□□□ -0.6
RPUSD4-201ENST00000298317 GNB4Q9HAV0 340 aa11.33□□□□□ -0.6
RPUSD4-201ENST00000298317 SNURFLB1AK76 121 aa11.32□□□□□ -0.6
RPUSD4-201ENST00000298317 G3V3Y1 287 aa11.32□□□□□ -0.6
RPUSD4-201ENST00000298317 SCRG1O75711 98 aa11.32□□□□□ -0.6
RPUSD4-201ENST00000298317 APOBEC3AP31941 199 aaPredicted RBP11.32□□□□□ -0.6
RPUSD4-201ENST00000298317 G6PCP35575 357 aa11.32□□□□□ -0.6
RPUSD4-201ENST00000298317 NXPH1P58417 271 aa11.32□□□□□ -0.6
RPUSD4-201ENST00000298317 MRPL49Q13405 166 aaKnown RBP11.32□□□□□ -0.6
RPUSD4-201ENST00000298317 HLA-DRB5Q30154 266 aa11.32□□□□□ -0.6
RPUSD4-201ENST00000298317 MORN2Q502X0 79 aa11.32□□□□□ -0.6
RPUSD4-201ENST00000298317 TXN2Q99757 166 aa11.32□□□□□ -0.6
RPUSD4-201ENST00000298317 FAM103A1Q9BTL3 118 aaKnown RBP11.32□□□□□ -0.6
RPUSD4-201ENST00000298317 NRN1Q9NPD7 142 aa11.32□□□□□ -0.6
RPUSD4-201ENST00000298317 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.32□□□□□ -0.6
RPUSD4-201ENST00000298317 RNF24Q9Y225 148 aa11.32□□□□□ -0.6
RPUSD4-201ENST00000298317 WDR83OSQ9Y284 106 aa11.32□□□□□ -0.6
RPUSD4-201ENST00000298317 K7EN84 100 aa11.32□□□□□ -0.6
RPUSD4-201ENST00000298317 SLC17A3O00476 420 aa11.32□□□□□ -0.6
RPUSD4-201ENST00000298317 ZNF253O75346 499 aa11.32□□□□□ -0.6
RPUSD4-201ENST00000298317 CELA2AP08217 269 aa11.32□□□□□ -0.6
RPUSD4-201ENST00000298317 FRMD6-AS1P0C7T7 363 aa11.32□□□□□ -0.6
RPUSD4-201ENST00000298317 IER3P46695 156 aa11.32□□□□□ -0.6
RPUSD4-201ENST00000298317 LDLRAD2Q5SZI1 272 aa11.32□□□□□ -0.6
RPUSD4-201ENST00000298317 MRPL21Q7Z2W9 205 aaKnown RBP11.32□□□□□ -0.6
RPUSD4-201ENST00000298317 FAM58AQ8N1B3 248 aa11.32□□□□□ -0.6
RPUSD4-201ENST00000298317 SFXN3Q9BWM7 321 aa11.32□□□□□ -0.6
RPUSD4-201ENST00000298317 GNB1LQ9BYB4 327 aa11.32□□□□□ -0.6
RPUSD4-201ENST00000298317 CST9LQ9H4G1 147 aa11.32□□□□□ -0.6
RPUSD4-201ENST00000298317 PRDM6Q9NQX0 595 aa11.32□□□□□ -0.6
RPUSD4-201ENST00000298317 IGHV2OR16-5A0A0B4J2B6 119 aa11.31□□□□□ -0.6
RPUSD4-201ENST00000298317 SMPD2O60906 423 aa11.31□□□□□ -0.6
RPUSD4-201ENST00000298317 B3GALT5-AS1P59052 145 aa11.31□□□□□ -0.6
RPUSD4-201ENST00000298317 SLC23A3Q6PIS1 610 aa11.31□□□□□ -0.6
RPUSD4-201ENST00000298317 Q6ZVH6 145 aa11.31□□□□□ -0.6
RPUSD4-201ENST00000298317 CADM4Q8NFZ8 388 aa11.31□□□□□ -0.6
RPUSD4-201ENST00000298317 OR2M7Q8NG81 312 aa11.31□□□□□ -0.6
RPUSD4-201ENST00000298317 KCNS1Q96KK3 526 aa11.31□□□□□ -0.6
RPUSD4-201ENST00000298317 ZNF430Q9H8G1 570 aaPredicted RBP11.31□□□□□ -0.6
RPUSD4-201ENST00000298317 SH2D2AQ9NP31 389 aa11.31□□□□□ -0.6
RPUSD4-201ENST00000298317 CLEC1BQ9P126 229 aa11.31□□□□□ -0.6
RPUSD4-201ENST00000298317 IL19Q9UHD0 177 aa11.31□□□□□ -0.6
RPUSD4-201ENST00000298317 A0A1W2PPV4 95 aa11.31□□□□□ -0.6
RPUSD4-201ENST00000298317 EPOPA6NHQ4 379 aa11.31□□□□□ -0.6
RPUSD4-201ENST00000298317 C3orf80F5H4A9 247 aa11.31□□□□□ -0.6
RPUSD4-201ENST00000298317 SS18L1O75177 396 aaPredicted RBP11.31□□□□□ -0.6
RPUSD4-201ENST00000298317 ARL14EPLP0DKL9 152 aa11.31□□□□□ -0.6
RPUSD4-201ENST00000298317 PCOLCEQ15113 449 aa11.31□□□□□ -0.6
RPUSD4-201ENST00000298317 OR10J3Q5JRS4 329 aa11.31□□□□□ -0.6
RPUSD4-201ENST00000298317 Q6P435 159 aa11.31□□□□□ -0.6
RPUSD4-201ENST00000298317 GGNQ86UU5 652 aa11.31□□□□□ -0.6
RPUSD4-201ENST00000298317 APH1AQ96BI3 265 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms