RNA–Protein interactions for RNA: ENST00000388948.7

LRRK1-201, Transcript of leucine rich repeat kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRRK1, Length 7,671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-201ENST00000388948 FAM209AQ5JX71 171 aa12.87□□□□□ -0.35
LRRK1-201ENST00000388948 CLEC9AQ6UXN8 241 aa12.87□□□□□ -0.35
LRRK1-201ENST00000388948 IGKV1-8A0A0C4DH67 115 aa12.87□□□□□ -0.35
LRRK1-201ENST00000388948 B2MP61769 119 aa12.87□□□□□ -0.35
LRRK1-201ENST00000388948 HIST1H3AP68431 136 aa12.87□□□□□ -0.35
LRRK1-201ENST00000388948 CADM3Q8N126 398 aa12.87□□□□□ -0.35
LRRK1-201ENST00000388948 A0A1W2PNV4 684 aa12.87□□□□□ -0.35
LRRK1-201ENST00000388948 TIMP4Q99727 224 aa12.87□□□□□ -0.35
LRRK1-201ENST00000388948 COL5A3P25940 1745 aaPredicted RBP12.87□□□□□ -0.35
LRRK1-201ENST00000388948 ZNF735P0CB33 412 aa12.87□□□□□ -0.35
LRRK1-201ENST00000388948 RIGQ13278 110 aa12.87□□□□□ -0.35
LRRK1-201ENST00000388948 PRNTQ86SH4 94 aa12.87□□□□□ -0.35
LRRK1-201ENST00000388948 THY1P04216 161 aa12.87□□□□□ -0.35
LRRK1-201ENST00000388948 MELTFP08582 738 aa12.87□□□□□ -0.35
LRRK1-201ENST00000388948 CRISP2P16562 243 aa12.87□□□□□ -0.35
LRRK1-201ENST00000388948 RALYQ9UKM9 306 aaKnown RBP12.87□□□□□ -0.35
LRRK1-201ENST00000388948 HYPMO75409 117 aa12.86□□□□□ -0.35
LRRK1-201ENST00000388948 FAM157CP0CG43 387 aa12.86□□□□□ -0.35
LRRK1-201ENST00000388948 USF1P22415 310 aaPredicted RBP12.86□□□□□ -0.35
LRRK1-201ENST00000388948 C19orf54Q5BKX5 351 aa12.86□□□□□ -0.35
LRRK1-201ENST00000388948 TMEM56-RWDD3S4R434 201 aa12.86□□□□□ -0.35
LRRK1-201ENST00000388948 A0A1W2PRX2 142 aa12.86□□□□□ -0.35
LRRK1-201ENST00000388948 ADAP1O75689 374 aa12.86□□□□□ -0.35
LRRK1-201ENST00000388948 OR2H2O95918 312 aa12.86□□□□□ -0.35
LRRK1-201ENST00000388948 HPXP02790 462 aa12.86□□□□□ -0.35
LRRK1-201ENST00000388948 CRHP06850 196 aa12.86□□□□□ -0.35
LRRK1-201ENST00000388948 ZNF154Q13106 437 aa12.86□□□□□ -0.35
LRRK1-201ENST00000388948 PNKDQ8N490 385 aa12.86□□□□□ -0.35
LRRK1-201ENST00000388948 TMEM37Q8WXS4 190 aa12.86□□□□□ -0.35
LRRK1-201ENST00000388948 NXF2Q9GZY0 626 aaKnown RBP12.86□□□□□ -0.35
LRRK1-201ENST00000388948 HPRT1P00492 218 aa12.86□□□□□ -0.35
LRRK1-201ENST00000388948 COMMD1Q8N668 190 aa12.86□□□□□ -0.35
LRRK1-201ENST00000388948 SYT8Q8NBV8 401 aa12.86□□□□□ -0.35
LRRK1-201ENST00000388948 COL24A1Q17RW2 1714 aa12.86□□□□□ -0.35
LRRK1-201ENST00000388948 A0A1W2PR77 199 aa12.86□□□□□ -0.35
LRRK1-201ENST00000388948 CEACAM18A8MTB9 384 aa12.86□□□□□ -0.35
LRRK1-201ENST00000388948 INHBBP09529 407 aa12.86□□□□□ -0.35
LRRK1-201ENST00000388948 HERVK_113P61574 105 aa12.86□□□□□ -0.35
LRRK1-201ENST00000388948 KLHDC1Q8N7A1 406 aa12.86□□□□□ -0.35
LRRK1-201ENST00000388948 TCL1AP56279 114 aa12.86□□□□□ -0.35
LRRK1-201ENST00000388948 DMKNQ6E0U4 476 aaPredicted RBP12.86□□□□□ -0.35
LRRK1-201ENST00000388948 MIEN1Q9BRT3 115 aa12.86□□□□□ -0.35
LRRK1-201ENST00000388948 ELOVL1Q9BW60 279 aa12.86□□□□□ -0.35
LRRK1-201ENST00000388948 FBXL17Q9UF56 701 aa12.86□□□□□ -0.35
LRRK1-201ENST00000388948 A0A0B4J293 547 aa12.86□□□□□ -0.35
LRRK1-201ENST00000388948 CENPVL1A0A0U1RR11 272 aa12.86□□□□□ -0.35
LRRK1-201ENST00000388948 CSRP1P21291 193 aaKnown RBP12.86□□□□□ -0.35
LRRK1-201ENST00000388948 MMP16P51512 607 aa12.86□□□□□ -0.35
LRRK1-201ENST00000388948 SNRPCP09234 159 aaKnown RBP12.85□□□□□ -0.35
LRRK1-201ENST00000388948 RNF212Q495C1 297 aa12.85□□□□□ -0.35
LRRK1-201ENST00000388948 MMD2Q8IY49 270 aa12.85□□□□□ -0.35
LRRK1-201ENST00000388948 HDHD3Q9BSH5 251 aaPredicted RBP12.85□□□□□ -0.35
LRRK1-201ENST00000388948 TLNRD1Q9H1K6 362 aa12.85□□□□□ -0.35
LRRK1-201ENST00000388948 IDI2-AS1Q9NZ38 188 aa12.85□□□□□ -0.35
LRRK1-201ENST00000388948 DOCK7Q96N67 2140 aa12.85□□□□□ -0.35
LRRK1-201ENST00000388948 SLC25A17O43808 307 aa12.85□□□□□ -0.35
LRRK1-201ENST00000388948 MPC2O95563 127 aa12.85□□□□□ -0.35
LRRK1-201ENST00000388948 RANP62826 216 aaKnown RBP12.85□□□□□ -0.35
LRRK1-201ENST00000388948 MYO7BQ6PIF6 2116 aa12.85□□□□□ -0.35
LRRK1-201ENST00000388948 ZNF66Q6ZN08 573 aa12.85□□□□□ -0.35
LRRK1-201ENST00000388948 CLEC7AQ9BXN2 247 aa12.85□□□□□ -0.35
LRRK1-201ENST00000388948 SFTA3P0C7M3 94 aa12.85□□□□□ -0.35
LRRK1-201ENST00000388948 SIGLEC12Q96PQ1 595 aa12.85□□□□□ -0.35
LRRK1-201ENST00000388948 SOSTQ9BQB4 213 aa12.85□□□□□ -0.35
LRRK1-201ENST00000388948 C7orf69Q9H7B7 122 aa12.85□□□□□ -0.35
LRRK1-201ENST00000388948 COL4A5P29400 1685 aa12.85□□□□□ -0.35
LRRK1-201ENST00000388948 OGG1O15527 345 aa12.85□□□□□ -0.35
LRRK1-201ENST00000388948 PGA4P0DJD7 388 aa12.85□□□□□ -0.35
LRRK1-201ENST00000388948 VSIG10L2P0DP72 767 aa12.85□□□□□ -0.35
LRRK1-201ENST00000388948 A0A0U1RQV5 110 aa12.85□□□□□ -0.35
LRRK1-201ENST00000388948 FUCA1P04066 466 aa12.85□□□□□ -0.35
LRRK1-201ENST00000388948 RPL8P62917 257 aaKnown RBP12.85□□□□□ -0.35
LRRK1-201ENST00000388948 RTN4RQ9BZR6 473 aa12.85□□□□□ -0.35
LRRK1-201ENST00000388948 MANBALQ9NQG1 85 aa12.85□□□□□ -0.35
LRRK1-201ENST00000388948 TMEM88Q6PEY1 159 aa12.85□□□□□ -0.35
LRRK1-201ENST00000388948 JMJD8Q96S16 334 aa12.85□□□□□ -0.35
LRRK1-201ENST00000388948 OR4C45A6NMZ5 311 aa12.84□□□□□ -0.35
LRRK1-201ENST00000388948 C11orf94C9JXX5 98 aa12.84□□□□□ -0.35
LRRK1-201ENST00000388948 LTBRP36941 435 aa12.84□□□□□ -0.35
LRRK1-201ENST00000388948 SCGB1D4Q6XE38 83 aa12.84□□□□□ -0.35
LRRK1-201ENST00000388948 FGF12P61328 243 aa12.84□□□□□ -0.35
LRRK1-201ENST00000388948 SRXN1Q9BYN0 137 aa12.84□□□□□ -0.35
LRRK1-201ENST00000388948 TO15178 435 aa12.84□□□□□ -0.35
LRRK1-201ENST00000388948 PSMB2P49721 201 aa12.84□□□□□ -0.35
LRRK1-201ENST00000388948 SURF2Q15527 256 aaPredicted RBP12.84□□□□□ -0.35
LRRK1-201ENST00000388948 SPSB2Q99619 263 aa12.84□□□□□ -0.35
LRRK1-201ENST00000388948 SSBP3Q9BWW4 388 aaPredicted RBP12.84□□□□□ -0.35
LRRK1-201ENST00000388948 RGS13O14921 159 aa12.84□□□□□ -0.35
LRRK1-201ENST00000388948 FAM57AQ8TBR7 257 aa12.84□□□□□ -0.35
LRRK1-201ENST00000388948 NEU3Q9UQ49 428 aa12.84□□□□□ -0.35
LRRK1-201ENST00000388948 CORTO00230 105 aa12.84□□□□□ -0.35
LRRK1-201ENST00000388948 DXOO77932 396 aaKnown RBP12.84□□□□□ -0.35
LRRK1-201ENST00000388948 TMEM33P57088 247 aa12.84□□□□□ -0.35
LRRK1-201ENST00000388948 TIMM23BQ5SRD1 257 aa12.84□□□□□ -0.35
LRRK1-201ENST00000388948 ZNF385DQ9H6B1 395 aa12.84□□□□□ -0.35
LRRK1-201ENST00000388948 ABCA1O95477 2261 aa12.84□□□□□ -0.35
LRRK1-201ENST00000388948 SULT1A1P50225 295 aa12.83□□□□□ -0.35
LRRK1-201ENST00000388948 MFAP4P55083 255 aa12.83□□□□□ -0.35
LRRK1-201ENST00000388948 BSPH1Q075Z2 132 aa12.83□□□□□ -0.35
LRRK1-201ENST00000388948 SPACA3Q8IXA5 215 aa12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms