RNA–Protein interactions for RNA: ENST00000513352.1

NUP54-213, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-213ENST00000513352 IGHV3-43DP0DP04 118 aa12.25□□□□□ -0.45
NUP54-213ENST00000513352 IGHV4-38-2P0DP08 117 aa12.25□□□□□ -0.45
NUP54-213ENST00000513352 GDNFP39905 211 aa12.25□□□□□ -0.45
NUP54-213ENST00000513352 HLA-DRB3P79483 266 aa12.25□□□□□ -0.45
NUP54-213ENST00000513352 GUCA2AQ02747 115 aa12.25□□□□□ -0.45
NUP54-213ENST00000513352 CNPY1Q3B7I2 92 aa12.25□□□□□ -0.45
NUP54-213ENST00000513352 RNASE12Q5GAN4 147 aaKnown RBP12.25□□□□□ -0.45
NUP54-213ENST00000513352 BAIAP2L2Q6UXY1 529 aa12.25□□□□□ -0.45
NUP54-213ENST00000513352 C5orf24Q7Z6I8 188 aa12.25□□□□□ -0.45
NUP54-213ENST00000513352 PNKDQ8N490 385 aa12.25□□□□□ -0.45
NUP54-213ENST00000513352 OR13D1Q8NGV5 346 aa12.25□□□□□ -0.45
NUP54-213ENST00000513352 IL1F10Q8WWZ1 152 aa12.25□□□□□ -0.45
NUP54-213ENST00000513352 KIRREL1Q96J84 757 aa12.25□□□□□ -0.45
NUP54-213ENST00000513352 IFT46Q9NQC8 304 aa12.25□□□□□ -0.45
NUP54-213ENST00000513352 CDC42EP3Q9UKI2 254 aa12.25□□□□□ -0.45
NUP54-213ENST00000513352 MGAT4AQ9UM21 535 aa12.25□□□□□ -0.45
NUP54-213ENST00000513352 TRBV6-6A0A0A6YYG2 114 aa12.24□□□□□ -0.45
NUP54-213ENST00000513352 RNASEK-C17orf49H0YIS7 233 aa12.24□□□□□ -0.45
NUP54-213ENST00000513352 C15orf65H3BRN8 121 aa12.24□□□□□ -0.45
NUP54-213ENST00000513352 SSX5O60225 188 aa12.24□□□□□ -0.45
NUP54-213ENST00000513352 IGHV3-7P01780 117 aa12.24□□□□□ -0.45
NUP54-213ENST00000513352 CGB3P0DN86 165 aa12.24□□□□□ -0.45
NUP54-213ENST00000513352 CGB7P0DN87 165 aa12.24□□□□□ -0.45
NUP54-213ENST00000513352 DTYMKP23919 212 aa12.24□□□□□ -0.45
NUP54-213ENST00000513352 FPR2P25090 351 aa12.24□□□□□ -0.45
NUP54-213ENST00000513352 PRSS3P35030 304 aa12.24□□□□□ -0.45
NUP54-213ENST00000513352 GNG10P50151 68 aa12.24□□□□□ -0.45
NUP54-213ENST00000513352 IL18Q14116 193 aa12.24□□□□□ -0.45
NUP54-213ENST00000513352 HMGN3Q15651 99 aa12.24□□□□□ -0.45
NUP54-213ENST00000513352 RUSC1-AS1Q66K80 236 aa12.24□□□□□ -0.45
NUP54-213ENST00000513352 OR52W1Q6IF63 320 aa12.24□□□□□ -0.45
NUP54-213ENST00000513352 ZNF880Q6PDB4 577 aa12.24□□□□□ -0.45
NUP54-213ENST00000513352 Q6ZPA2 131 aa12.24□□□□□ -0.45
NUP54-213ENST00000513352 C11orf42Q8N5U0 333 aa12.24□□□□□ -0.45
NUP54-213ENST00000513352 OR10V1Q8NGI7 309 aa12.24□□□□□ -0.45
NUP54-213ENST00000513352 LEAP2Q969E1 77 aa12.24□□□□□ -0.45
NUP54-213ENST00000513352 GALMQ96C23 342 aa12.24□□□□□ -0.45
NUP54-213ENST00000513352 TMEM133Q9H2Q1 129 aa12.24□□□□□ -0.45
NUP54-213ENST00000513352 ZNF286AQ9HBT8 521 aa12.24□□□□□ -0.45
NUP54-213ENST00000513352 GNG12Q9UBI6 72 aa12.24□□□□□ -0.45
NUP54-213ENST00000513352 A3GALT2U3KPV4 340 aa12.24□□□□□ -0.45
NUP54-213ENST00000513352 IGHV1-69DA0A0B4J2H0 117 aa12.23□□□□□ -0.45
NUP54-213ENST00000513352 CENPVL3A0A0U1RRI6 287 aa12.23□□□□□ -0.45
NUP54-213ENST00000513352 TRDCB7Z8K6 153 aa12.23□□□□□ -0.45
NUP54-213ENST00000513352 IGHV1-69P01742 117 aa12.23□□□□□ -0.45
NUP54-213ENST00000513352 SRD5A1P18405 259 aa12.23□□□□□ -0.45
NUP54-213ENST00000513352 TNFSF8P32971 234 aa12.23□□□□□ -0.45
NUP54-213ENST00000513352 CHRFAM7AQ494W8 412 aa12.23□□□□□ -0.45
NUP54-213ENST00000513352 KLF17Q5JT82 389 aaPredicted RBP12.23□□□□□ -0.45
NUP54-213ENST00000513352 BRD3OSQ6XYD6 125 aa12.23□□□□□ -0.45
NUP54-213ENST00000513352 ZNF554Q86TJ5 538 aa12.23□□□□□ -0.45
NUP54-213ENST00000513352 TNFRSF14Q92956 283 aa12.23□□□□□ -0.45
NUP54-213ENST00000513352 CLEC7AQ9BXN2 247 aa12.23□□□□□ -0.45
NUP54-213ENST00000513352 MS4A7Q9GZW8 240 aaPredicted RBP12.23□□□□□ -0.45
NUP54-213ENST00000513352 UNKLQ9H9P5 680 aaKnown RBP12.23□□□□□ -0.45
NUP54-213ENST00000513352 NUP50Q9UKX7 468 aa12.23□□□□□ -0.45
NUP54-213ENST00000513352 TEP1Q99973 2627 aaKnown RBP12.23□□□□□ -0.45
NUP54-213ENST00000513352 IGHV2-26A0A0B4J1V2 119 aa12.22□□□□□ -0.45
NUP54-213ENST00000513352 NPIPB11E5RHQ5 1161 aa12.22□□□□□ -0.45
NUP54-213ENST00000513352 TOR1AO14656 332 aa12.22□□□□□ -0.45
NUP54-213ENST00000513352 HSPA12AO43301 675 aa12.22□□□□□ -0.45
NUP54-213ENST00000513352 HLA-DQB1P01920 261 aa12.22□□□□□ -0.45
NUP54-213ENST00000513352 ARG1P05089 322 aa12.22□□□□□ -0.45
NUP54-213ENST00000513352 MELTFP08582 738 aa12.22□□□□□ -0.45
NUP54-213ENST00000513352 SCTP09683 121 aa12.22□□□□□ -0.45
NUP54-213ENST00000513352 KIR2DS4P43632 304 aa12.22□□□□□ -0.45
NUP54-213ENST00000513352 CBX5P45973 191 aa12.22□□□□□ -0.45
NUP54-213ENST00000513352 LGALS4P56470 323 aa12.22□□□□□ -0.45
NUP54-213ENST00000513352 KIR2DS1Q14954 304 aa12.22□□□□□ -0.45
NUP54-213ENST00000513352 FAM131AQ6UXB0 335 aa12.22□□□□□ -0.45
NUP54-213ENST00000513352 ABHD12Q8N2K0 398 aa12.22□□□□□ -0.45
NUP54-213ENST00000513352 GVQW1Q8N7I0 195 aa12.22□□□□□ -0.45
NUP54-213ENST00000513352 OR10A7Q8NGE5 316 aa12.22□□□□□ -0.45
NUP54-213ENST00000513352 OR52L2PQ8NGH6 319 aa12.22□□□□□ -0.45
NUP54-213ENST00000513352 C22orf15Q8WYQ4 148 aa12.22□□□□□ -0.45
NUP54-213ENST00000513352 OR2S2Q9NQN1 319 aa12.22□□□□□ -0.45
NUP54-213ENST00000513352 SLC23A1Q9UHI7 598 aa12.22□□□□□ -0.45
NUP54-213ENST00000513352 MEIOCA2RUB1 952 aa12.21□□□□□ -0.45
NUP54-213ENST00000513352 FABP12A6NFH5 140 aa12.21□□□□□ -0.45
NUP54-213ENST00000513352 POM121CA8CG34 1229 aa12.21□□□□□ -0.45
NUP54-213ENST00000513352 F2RL2O00254 374 aa12.21□□□□□ -0.45
NUP54-213ENST00000513352 NPFFO15130 113 aa12.21□□□□□ -0.45
NUP54-213ENST00000513352 BET1O15155 118 aa12.21□□□□□ -0.45
NUP54-213ENST00000513352 FABP7O15540 132 aa12.21□□□□□ -0.45
NUP54-213ENST00000513352 FSHBP01225 129 aa12.21□□□□□ -0.45
NUP54-213ENST00000513352 LPLP06858 475 aa12.21□□□□□ -0.45
NUP54-213ENST00000513352 EPHA1P21709 976 aa12.21□□□□□ -0.45
NUP54-213ENST00000513352 PPP1CCP36873 323 aaKnown RBP12.21□□□□□ -0.45
NUP54-213ENST00000513352 UBE2E1P51965 193 aa12.21□□□□□ -0.45
NUP54-213ENST00000513352 ARPC4P59998 168 aa12.21□□□□□ -0.45
NUP54-213ENST00000513352 GNMTQ14749 295 aa12.21□□□□□ -0.45
NUP54-213ENST00000513352 TMEM30BQ3MIR4 351 aa12.21□□□□□ -0.45
NUP54-213ENST00000513352 HCP5Q6MZN7 132 aa12.21□□□□□ -0.45
NUP54-213ENST00000513352 FAM53AQ6NSI3 398 aaPredicted RBP12.21□□□□□ -0.45
NUP54-213ENST00000513352 C15orf40Q8WUR7 153 aa12.21□□□□□ -0.45
NUP54-213ENST00000513352 LINC00574Q9H8X3 128 aa12.21□□□□□ -0.45
NUP54-213ENST00000513352 GFOD1Q9NXC2 390 aa12.21□□□□□ -0.45
NUP54-213ENST00000513352 ZNF69Q9UC07 566 aa12.21□□□□□ -0.45
NUP54-213ENST00000513352 NAV3Q8IVL0 2385 aa12.2□□□□□ -0.46
NUP54-213ENST00000513352 GSTT2P0CG29 244 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 145.6 ms