RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Olfr1442Q0VEV7 312 aa13.86□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Wdr34Q5U4F6 535 aa13.86□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Zfp273Q7M6W8 501 aa13.86□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Zfp85Q7TMC9 473 aa13.86□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Olfr509Q8VF20 321 aa13.86□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Vmn1r7E9Q8T0 311 aa13.86□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Kcnj15O88932 375 aa13.86□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Gabra6P16305 453 aa13.86□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Meox2P32443 303 aa13.86□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Zfp974Q3UVF6 752 aa13.86□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Olfr1411Q8VFC4 323 aa13.86□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Gm12117V9GXK0 151 aa13.86□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Gm45808A0A1B0GSH8 263 aa13.86□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Prss48Q14B25 312 aa13.86□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Fa2hQ5MPP0 372 aa13.86□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Ubqln3Q8C5U9 658 aa13.86□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Tmem267Q8VDR5 215 aa13.86□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 QprtQ91X91 299 aa13.86□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Abhd3Q91ZH7 411 aa13.86□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Olfr702Q920Z2 318 aa13.86□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Pga5Q9D106 387 aa13.86□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Kcne3Q9WTW2 103 aa13.86□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Slc18a3O35304 530 aa13.85□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Myo16Q5DU14 1919 aa13.85□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Ldlrad4Q8BWJ4 306 aa13.85□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 SrfQ9JM73 504 aa13.85□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Abhd16aQ9Z1Q2 558 aa13.85□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Rpp30O88796 268 aaKnown RBP13.85□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 H3f3cP02301 136 aa13.85□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 H3f3aP84244 136 aaKnown RBP13.85□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Gdf9Q07105 441 aa13.85□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 4930480E11RikQ0VG34 394 aa13.85□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Olfr1229Q7TQZ9 311 aa13.85□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Zfp52Q8BJ45 724 aa13.85□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Edem2Q8BJT9 577 aa13.85□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Fam120cQ8C3F2 1091 aaKnown RBP13.85□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 TifabQ8JZM6 147 aa13.85□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Fam199xQ8K2D0 388 aa13.85□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Olfr113Q8VEU4 312 aa13.85□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Fzd2Q9JIP6 570 aa13.85□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Tanc1Q0VGY8 1856 aa13.85□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Gm42420A0A0J9YUQ2 99 aa13.85□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Gm44973A0A140LJJ1 189 aa13.85□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Gm13757Q7TR17 305 aa13.85□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Exosc6Q8BTW3 273 aa13.85□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Eddm3bQ8K0E4 149 aa13.85□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Nt5mQ8VCE6 220 aa13.85□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Washc3Q9CR27 194 aa13.85□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Znf524Q9D0B1 321 aa13.85□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Galnt16Q9JJ61 558 aa13.85□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Il17bQ9QXT6 180 aa13.85□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Ankrd60A2AMD2 318 aa13.85□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Gm21721J3QMK7 227 aa13.85□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Slc6a1P31648 599 aa13.85□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Klf3Q60980 344 aa13.85□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Tmem251Q8BH26 163 aa13.85□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Adamts4Q8BNJ2 833 aa13.85□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Scmh1Q8K214 706 aa13.85□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Olfr1393Q8VFA7 311 aa13.85□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 NrasP08556 189 aa13.84□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 P18533 117 aa13.84□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Sf3b6P59708 125 aaKnown RBP13.84□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Dus4lQ32M08 324 aa13.84□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Cd300lbQ3U497 209 aa13.84□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Zdhhc25Q810M4 279 aa13.84□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Syngr3Q8R191 229 aa13.84□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Olfr368Q8VF22 327 aa13.84□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Gpx4Q91XR9 253 aa13.84□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Golt1aQ9DCQ3 133 aa13.84□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 GrinaQ9ESF4 345 aa13.84□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Gm11756A2BEJ1 356 aa13.84□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Casp6O08738 276 aa13.84□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 SnrpeP62305 92 aaKnown RBP13.84□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Olfr142Q60881 305 aa13.84□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Coq3Q8BMS4 370 aa13.84□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 RfxapQ8VCG9 231 aa13.84□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Srsf4Q8VE97 489 aaKnown RBP13.84□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Q9CYS6 286 aa13.84□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Fzd5Q9EQD0 585 aa13.84□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Lrrc3cA0A1B0GRI5 255 aa13.84□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Olfr250E9PV37 331 aa13.84□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Olfr66F8VQ01 311 aa13.84□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Wnt11P48615 354 aa13.84□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 KhkP97328 298 aa13.84□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Lrrc75aQ7TSF4 339 aa13.84□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Rps19bp1Q8C6B9 143 aaKnown RBP13.84□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Ddb2Q99J79 432 aa13.84□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Cpn1Q9JJN5 457 aa13.84□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Tas2r4Q9JKT3 297 aa13.84□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Olfr785A0A0N4SVC3 312 aa13.84□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Ascl4M0QW46 144 aa13.84□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Stfa1P35175 97 aa13.84□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Olfr259Q7TS20 312 aa13.84□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 TxnipQ8BG60 397 aa13.84□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Id1P20067 168 aa13.83□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Olfr222Q7TS30 318 aa13.83□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Mrpl41Q9CQN7 135 aaKnown RBP13.83□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Derl3Q9D8K3 228 aa13.83□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Ank3G5E8K5 1961 aa13.83□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Zfp688E9Q5M9 274 aa13.83□□□□□ -0.2
Retrieved 100 of 22,080 RNA–protein pairs in 61.2 ms