Protein–RNA interactions for Protein: Q8BWJ4

Ldlrad4, Low-density lipoprotein receptor class A domain-containing protein 4, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlrad4Q8BWJ4 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
Ldlrad4Q8BWJ4 Gm25239-201ENSMUST00000174915 86 ntBASIC29.19■■■□□ 2.26
Ldlrad4Q8BWJ4 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC28.76■■■□□ 2.2
Ldlrad4Q8BWJ4 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Ldlrad4Q8BWJ4 Psd-208ENSMUST00000224556 2034 ntBASIC27.99■■■□□ 2.07
Ldlrad4Q8BWJ4 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Ldlrad4Q8BWJ4 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Ldlrad4Q8BWJ4 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
Ldlrad4Q8BWJ4 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.93
Ldlrad4Q8BWJ4 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Ldlrad4Q8BWJ4 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Ldlrad4Q8BWJ4 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Ldlrad4Q8BWJ4 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Ldlrad4Q8BWJ4 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Ldlrad4Q8BWJ4 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC26.42■■□□□ 1.82
Ldlrad4Q8BWJ4 Gm15042-201ENSMUST00000120212 883 ntBASIC26.35■■□□□ 1.81
Ldlrad4Q8BWJ4 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Ldlrad4Q8BWJ4 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Ldlrad4Q8BWJ4 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
Ldlrad4Q8BWJ4 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
Ldlrad4Q8BWJ4 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Ldlrad4Q8BWJ4 Gm15045-201ENSMUST00000117359 883 ntBASIC25.97■■□□□ 1.75
Ldlrad4Q8BWJ4 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.74
Ldlrad4Q8BWJ4 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
Ldlrad4Q8BWJ4 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC25.76■■□□□ 1.72
Ldlrad4Q8BWJ4 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
Ldlrad4Q8BWJ4 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Ldlrad4Q8BWJ4 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
Ldlrad4Q8BWJ4 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC25.6■■□□□ 1.69
Ldlrad4Q8BWJ4 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Ldlrad4Q8BWJ4 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC25.51■■□□□ 1.67
Ldlrad4Q8BWJ4 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC25.49■■□□□ 1.67
Ldlrad4Q8BWJ4 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC25.49■■□□□ 1.67
Ldlrad4Q8BWJ4 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
Ldlrad4Q8BWJ4 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
Ldlrad4Q8BWJ4 Gm10524-201ENSMUST00000181931 1893 ntBASIC25.21■■□□□ 1.63
Ldlrad4Q8BWJ4 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Ldlrad4Q8BWJ4 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Ldlrad4Q8BWJ4 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Ldlrad4Q8BWJ4 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Ldlrad4Q8BWJ4 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC25.09■■□□□ 1.61
Ldlrad4Q8BWJ4 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Ldlrad4Q8BWJ4 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Ldlrad4Q8BWJ4 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC25.03■■□□□ 1.6
Ldlrad4Q8BWJ4 Gm42596-201ENSMUST00000196305 1958 ntBASIC24.99■■□□□ 1.59
Ldlrad4Q8BWJ4 Gm24109-201ENSMUST00000175489 103 ntBASIC24.95■■□□□ 1.58
Ldlrad4Q8BWJ4 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Ldlrad4Q8BWJ4 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC24.86■■□□□ 1.57
Ldlrad4Q8BWJ4 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Ldlrad4Q8BWJ4 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Ldlrad4Q8BWJ4 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Ldlrad4Q8BWJ4 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
Ldlrad4Q8BWJ4 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Ldlrad4Q8BWJ4 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Ldlrad4Q8BWJ4 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
Ldlrad4Q8BWJ4 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Ldlrad4Q8BWJ4 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Ldlrad4Q8BWJ4 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Ldlrad4Q8BWJ4 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Ldlrad4Q8BWJ4 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC24.48■■□□□ 1.51
Ldlrad4Q8BWJ4 Gm23366-201ENSMUST00000175022 89 ntBASIC24.47■■□□□ 1.51
Ldlrad4Q8BWJ4 CT025624.2-201ENSMUST00000223609 1909 ntBASIC24.44■■□□□ 1.5
Ldlrad4Q8BWJ4 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Ldlrad4Q8BWJ4 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
Ldlrad4Q8BWJ4 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Ldlrad4Q8BWJ4 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Ldlrad4Q8BWJ4 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
Ldlrad4Q8BWJ4 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Ldlrad4Q8BWJ4 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Ldlrad4Q8BWJ4 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC24.24■■□□□ 1.47
Ldlrad4Q8BWJ4 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Ldlrad4Q8BWJ4 AC153911.1-202ENSMUST00000218534 1034 ntBASIC24.2■■□□□ 1.46
Ldlrad4Q8BWJ4 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
Ldlrad4Q8BWJ4 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC24.12■■□□□ 1.45
Ldlrad4Q8BWJ4 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Ldlrad4Q8BWJ4 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Ldlrad4Q8BWJ4 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Ldlrad4Q8BWJ4 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
Ldlrad4Q8BWJ4 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
Ldlrad4Q8BWJ4 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Ldlrad4Q8BWJ4 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Ldlrad4Q8BWJ4 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Ldlrad4Q8BWJ4 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Ldlrad4Q8BWJ4 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC23.92■■□□□ 1.42
Ldlrad4Q8BWJ4 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC23.89■■□□□ 1.42
Ldlrad4Q8BWJ4 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ldlrad4Q8BWJ4 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ldlrad4Q8BWJ4 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
Ldlrad4Q8BWJ4 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ldlrad4Q8BWJ4 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC23.7■■□□□ 1.39
Ldlrad4Q8BWJ4 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ldlrad4Q8BWJ4 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ldlrad4Q8BWJ4 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ldlrad4Q8BWJ4 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Ldlrad4Q8BWJ4 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ldlrad4Q8BWJ4 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Ldlrad4Q8BWJ4 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
Ldlrad4Q8BWJ4 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
Ldlrad4Q8BWJ4 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
Ldlrad4Q8BWJ4 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC23.53■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 116.9 ms