RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 PRSS44E7EML9 344 aa14.77□□□□□ -0.04
NEK3-206ENST00000611833 CDS2O95674 445 aa14.77□□□□□ -0.04
NEK3-206ENST00000611833 NGFP01138 241 aa14.77□□□□□ -0.04
NEK3-206ENST00000611833 ARR3P36575 388 aa14.77□□□□□ -0.04
NEK3-206ENST00000611833 PPT1P50897 306 aa14.77□□□□□ -0.04
NEK3-206ENST00000611833 PLP2Q04941 152 aa14.77□□□□□ -0.04
NEK3-206ENST00000611833 AKIRIN2Q53H80 203 aa14.77□□□□□ -0.04
NEK3-206ENST00000611833 TMEM164Q5U3C3 297 aa14.77□□□□□ -0.04
NEK3-206ENST00000611833 LHX6Q9UPM6 363 aa14.77□□□□□ -0.04
NEK3-206ENST00000611833 C21orf140B9A014 251 aa14.77□□□□□ -0.05
NEK3-206ENST00000611833 NAPSAO96009 420 aa14.77□□□□□ -0.05
NEK3-206ENST00000611833 CD59P13987 128 aa14.77□□□□□ -0.05
NEK3-206ENST00000611833 PEA15Q15121 130 aa14.77□□□□□ -0.05
NEK3-206ENST00000611833 TSC22D1Q15714 1073 aa14.77□□□□□ -0.05
NEK3-206ENST00000611833 SRSF7Q16629 238 aaKnown RBP eCLIP14.77□□□□□ -0.05
NEK3-206ENST00000611833 MCEMP1Q8IX19 187 aa14.77□□□□□ -0.05
NEK3-206ENST00000611833 SUMF1Q8NBK3 374 aa14.77□□□□□ -0.05
NEK3-206ENST00000611833 SH3BGRL3Q9H299 93 aa14.77□□□□□ -0.05
NEK3-206ENST00000611833 GPR179Q6PRD1 2367 aa14.77□□□□□ -0.05
NEK3-206ENST00000611833 SNCAP37840 140 aa14.76□□□□□ -0.05
NEK3-206ENST00000611833 NKX2-1P43699 371 aaPredicted RBP14.76□□□□□ -0.05
NEK3-206ENST00000611833 FHITP49789 147 aa14.76□□□□□ -0.05
NEK3-206ENST00000611833 ASCL1P50553 236 aa14.76□□□□□ -0.05
NEK3-206ENST00000611833 MPV17LQ2QL34 196 aa14.76□□□□□ -0.05
NEK3-206ENST00000611833 ZNF818PQ6ZRF7 136 aa14.76□□□□□ -0.05
NEK3-206ENST00000611833 GAPTQ8N292 157 aa14.76□□□□□ -0.05
NEK3-206ENST00000611833 OR5A2Q8NGI9 324 aa14.76□□□□□ -0.05
NEK3-206ENST00000611833 SPIN2AQ99865 258 aa14.76□□□□□ -0.05
NEK3-206ENST00000611833 SPIN2BQ9BPZ2 258 aa14.76□□□□□ -0.05
NEK3-206ENST00000611833 ZNF552Q9H707 407 aaPredicted RBP14.76□□□□□ -0.05
NEK3-206ENST00000611833 C19orf12Q9NSK7 152 aa14.76□□□□□ -0.05
NEK3-206ENST00000611833 KPTNQ9Y664 436 aa14.76□□□□□ -0.05
NEK3-206ENST00000611833 ZNF407Q9C0G0 2248 aa14.76□□□□□ -0.05
NEK3-206ENST00000611833 KIR2DS1A0A191URI9 304 aa14.76□□□□□ -0.05
NEK3-206ENST00000611833 ZNF724A8MTY0 619 aa14.76□□□□□ -0.05
NEK3-206ENST00000611833 FAM157AC9JC47 383 aa14.76□□□□□ -0.05
NEK3-206ENST00000611833 NDUFA2O43678 99 aa14.76□□□□□ -0.05
NEK3-206ENST00000611833 HEXAP06865 529 aa14.76□□□□□ -0.05
NEK3-206ENST00000611833 SP9P0CG40 484 aa14.76□□□□□ -0.05
NEK3-206ENST00000611833 PRKACAP17612 351 aa14.76□□□□□ -0.05
NEK3-206ENST00000611833 KIR2DS4P43632 304 aa14.76□□□□□ -0.05
NEK3-206ENST00000611833 EWSR1Q01844 656 aaKnown RBP eCLIP14.76□□□□□ -0.05
NEK3-206ENST00000611833 KIR2DS1Q14954 304 aa14.76□□□□□ -0.05
NEK3-206ENST00000611833 C3AR1Q16581 482 aa14.76□□□□□ -0.05
NEK3-206ENST00000611833 OR2C3Q8N628 320 aa14.76□□□□□ -0.05
NEK3-206ENST00000611833 COMMD1Q8N668 190 aa14.76□□□□□ -0.05
NEK3-206ENST00000611833 BOD1Q96IK1 185 aa14.76□□□□□ -0.05
NEK3-206ENST00000611833 POM121L2Q96KW2 1035 aa14.76□□□□□ -0.05
NEK3-206ENST00000611833 TMEM56Q96MV1 263 aa14.76□□□□□ -0.05
NEK3-206ENST00000611833 USB1Q9BQ65 265 aaKnown RBP14.76□□□□□ -0.05
NEK3-206ENST00000611833 EIF5A2Q9GZV4 153 aaKnown RBP14.76□□□□□ -0.05
NEK3-206ENST00000611833 CACFD1Q9UGQ2 172 aa14.76□□□□□ -0.05
NEK3-206ENST00000611833 IL17BQ9UHF5 180 aa14.76□□□□□ -0.05
NEK3-206ENST00000611833 TMEM56-RWDD3S4R434 201 aa14.76□□□□□ -0.05
NEK3-206ENST00000611833 FAM24AA6NFZ4 105 aa14.75□□□□□ -0.05
NEK3-206ENST00000611833 CD300LBA8K4G0 201 aa14.75□□□□□ -0.05
NEK3-206ENST00000611833 HSD17B6O14756 317 aa14.75□□□□□ -0.05
NEK3-206ENST00000611833 SYNGR1O43759 233 aa14.75□□□□□ -0.05
NEK3-206ENST00000611833 C1QL1O75973 258 aa14.75□□□□□ -0.05
NEK3-206ENST00000611833 KCNJ3P48549 501 aa14.75□□□□□ -0.05
NEK3-206ENST00000611833 RAB5CP51148 216 aa14.75□□□□□ -0.05
NEK3-206ENST00000611833 GUK1Q16774 197 aa14.75□□□□□ -0.05
NEK3-206ENST00000611833 GPHA2Q96T91 129 aa14.75□□□□□ -0.05
NEK3-206ENST00000611833 MED13Q9UHV7 2174 aa14.75□□□□□ -0.05
NEK3-206ENST00000611833 SLC22A20A6NK97 555 aa14.75□□□□□ -0.05
NEK3-206ENST00000611833 RND3P61587 244 aa14.75□□□□□ -0.05
NEK3-206ENST00000611833 POLR2GP62487 172 aaKnown RBP eCLIP14.75□□□□□ -0.05
NEK3-206ENST00000611833 HMGN3Q15651 99 aa14.75□□□□□ -0.05
NEK3-206ENST00000611833 SELENOHQ8IZQ5 122 aaKnown RBP14.75□□□□□ -0.05
NEK3-206ENST00000611833 STRAPQ9Y3F4 350 aaKnown RBP14.75□□□□□ -0.05
NEK3-206ENST00000611833 DNAJC13O75165 2243 aa14.74□□□□□ -0.05
NEK3-206ENST00000611833 ANKRD30BLA7E2S9 258 aa14.74□□□□□ -0.05
NEK3-206ENST00000611833 CDX4O14627 284 aaPredicted RBP14.74□□□□□ -0.05
NEK3-206ENST00000611833 ADAM20O43506 726 aa14.74□□□□□ -0.05
NEK3-206ENST00000611833 CTXN2P0C2S0 81 aa14.74□□□□□ -0.05
NEK3-206ENST00000611833 CLINT1Q14677 625 aa14.74□□□□□ -0.05
NEK3-206ENST00000611833 HERPUD1Q15011 391 aa14.74□□□□□ -0.05
NEK3-206ENST00000611833 NUFIP2Q7Z417 695 aaKnown RBP14.74□□□□□ -0.05
NEK3-206ENST00000611833 RXFP4Q8TDU9 374 aa14.74□□□□□ -0.05
NEK3-206ENST00000611833 CCL28Q9NRJ3 127 aa14.74□□□□□ -0.05
NEK3-206ENST00000611833 ATP23Q9Y6H3 246 aa14.74□□□□□ -0.05
NEK3-206ENST00000611833 IGKV1D-13A0A0B4J2D9 117 aa14.74□□□□□ -0.05
NEK3-206ENST00000611833 SSSCA1O60232 199 aa14.74□□□□□ -0.05
NEK3-206ENST00000611833 SS18L1O75177 396 aaPredicted RBP14.74□□□□□ -0.05
NEK3-206ENST00000611833 IGKV1-13P0DP09 117 aa14.74□□□□□ -0.05
NEK3-206ENST00000611833 SPINK2P20155 84 aa14.74□□□□□ -0.05
NEK3-206ENST00000611833 APLNRP35414 380 aa14.74□□□□□ -0.05
NEK3-206ENST00000611833 RAB13P51153 203 aa14.74□□□□□ -0.05
NEK3-206ENST00000611833 VAMP2P63027 116 aa14.74□□□□□ -0.05
NEK3-206ENST00000611833 RNPS1Q15287 305 aaKnown RBP14.74□□□□□ -0.05
NEK3-206ENST00000611833 AVPI1Q5T686 147 aa14.74□□□□□ -0.05
NEK3-206ENST00000611833 TMEM182Q6ZP80 229 aaPredicted RBP14.74□□□□□ -0.05
NEK3-206ENST00000611833 CMTM1Q8IZ96 169 aa14.74□□□□□ -0.05
NEK3-206ENST00000611833 MAGT1Q9H0U3 335 aa14.74□□□□□ -0.05
NEK3-206ENST00000611833 OR51B6Q9H340 312 aa14.74□□□□□ -0.05
NEK3-206ENST00000611833 OPA3Q9H6K4 179 aa14.74□□□□□ -0.05
NEK3-206ENST00000611833 RNF122Q9H9V4 155 aa14.74□□□□□ -0.05
NEK3-206ENST00000611833 SMCO4Q9NRQ5 59 aa14.74□□□□□ -0.05
NEK3-206ENST00000611833 TNRC6AQ8NDV7 1962 aaKnown RBP14.73□□□□□ -0.05
NEK3-206ENST00000611833 HS3ST1O14792 307 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms