RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 OR2C3Q8N628 320 aa5.95□□□□□ -1.46
LINC-ROR-201ENST00000553704 CCDC71LQ8N9Z2 235 aa5.95□□□□□ -1.46
LINC-ROR-201ENST00000553704 PLPPR1Q8TBJ4 325 aa5.95□□□□□ -1.46
LINC-ROR-201ENST00000553704 ZNF488Q96MN9 340 aa5.95□□□□□ -1.46
LINC-ROR-201ENST00000553704 HES7Q9BYE0 225 aa5.95□□□□□ -1.46
LINC-ROR-201ENST00000553704 SMOC1Q9H4F8 434 aa5.95□□□□□ -1.46
LINC-ROR-201ENST00000553704 TMED3Q9Y3Q3 217 aa5.95□□□□□ -1.46
LINC-ROR-201ENST00000553704 A0A0G2JRQ6 117 aa5.94□□□□□ -1.46
LINC-ROR-201ENST00000553704 C5orf52A6NGY3 159 aa5.94□□□□□ -1.46
LINC-ROR-201ENST00000553704 HSD17B6O14756 317 aa5.94□□□□□ -1.46
LINC-ROR-201ENST00000553704 ATXN7O15265 892 aaPredicted RBP5.94□□□□□ -1.46
LINC-ROR-201ENST00000553704 CYTIPO60759 359 aa5.94□□□□□ -1.46
LINC-ROR-201ENST00000553704 LILRA1O75019 489 aa5.94□□□□□ -1.46
LINC-ROR-201ENST00000553704 NAPSAO96009 420 aa5.94□□□□□ -1.46
LINC-ROR-201ENST00000553704 IFNA4P05014 189 aa5.94□□□□□ -1.46
LINC-ROR-201ENST00000553704 AGAP20933 346 aa5.94□□□□□ -1.46
LINC-ROR-201ENST00000553704 HAAOP46952 286 aa5.94□□□□□ -1.46
LINC-ROR-201ENST00000553704 SULT1A1P50225 295 aa5.94□□□□□ -1.46
LINC-ROR-201ENST00000553704 FOXO1Q12778 655 aa5.94□□□□□ -1.46
LINC-ROR-201ENST00000553704 SPIN3Q5JUX0 258 aa5.94□□□□□ -1.46
LINC-ROR-201ENST00000553704 RIPPLY2Q5TAB7 128 aa5.94□□□□□ -1.46
LINC-ROR-201ENST00000553704 SPSB3Q6PJ21 355 aa5.94□□□□□ -1.46
LINC-ROR-201ENST00000553704 TIPARPQ7Z3E1 657 aaKnown RBP5.94□□□□□ -1.46
LINC-ROR-201ENST00000553704 DPPA2Q7Z7J5 298 aa5.94□□□□□ -1.46
LINC-ROR-201ENST00000553704 FAM24BQ8N5W8 94 aa5.94□□□□□ -1.46
LINC-ROR-201ENST00000553704 TMEM105Q8N8V8 129 aa5.94□□□□□ -1.46
LINC-ROR-201ENST00000553704 ZFP62Q8NB50 900 aaPredicted RBP5.94□□□□□ -1.46
LINC-ROR-201ENST00000553704 CD300LFQ8TDQ1 290 aa5.94□□□□□ -1.46
LINC-ROR-201ENST00000553704 HLA-CQ95604 372 aa5.94□□□□□ -1.46
LINC-ROR-201ENST00000553704 SGCZQ96LD1 299 aa5.94□□□□□ -1.46
LINC-ROR-201ENST00000553704 SIGLEC12Q96PQ1 595 aa5.94□□□□□ -1.46
LINC-ROR-201ENST00000553704 SYT3Q9BQG1 590 aa5.94□□□□□ -1.46
LINC-ROR-201ENST00000553704 PRRG4Q9BZD6 226 aa5.94□□□□□ -1.46
LINC-ROR-201ENST00000553704 Q9N2K0 584 aa5.94□□□□□ -1.46
LINC-ROR-201ENST00000553704 ARHGAP21Q5T5U3 1957 aa5.94□□□□□ -1.46
LINC-ROR-201ENST00000553704 SLC22A20A6NK97 555 aa5.94□□□□□ -1.46
LINC-ROR-201ENST00000553704 C1orf196B1AJZ1 125 aa5.94□□□□□ -1.46
LINC-ROR-201ENST00000553704 PROB1E7EW31 1015 aa5.94□□□□□ -1.46
LINC-ROR-201ENST00000553704 SYNGR1O43759 233 aa5.94□□□□□ -1.46
LINC-ROR-201ENST00000553704 PITX3O75364 302 aa5.94□□□□□ -1.46
LINC-ROR-201ENST00000553704 CST7O76096 145 aa5.94□□□□□ -1.46
LINC-ROR-201ENST00000553704 CDS2O95674 445 aa5.94□□□□□ -1.46
LINC-ROR-201ENST00000553704 ITGA3P26006 1051 aa5.94□□□□□ -1.46
LINC-ROR-201ENST00000553704 NKX2-1P43699 371 aaPredicted RBP5.94□□□□□ -1.46
LINC-ROR-201ENST00000553704 B2MP61769 119 aa5.94□□□□□ -1.46
LINC-ROR-201ENST00000553704 RPS23P62266 143 aaKnown RBP5.94□□□□□ -1.46
LINC-ROR-201ENST00000553704 ARF1P84077 181 aaKnown RBP5.94□□□□□ -1.46
LINC-ROR-201ENST00000553704 SRYQ05066 204 aa5.94□□□□□ -1.46
LINC-ROR-201ENST00000553704 HAGHQ16775 308 aa5.94□□□□□ -1.46
LINC-ROR-201ENST00000553704 NMSQ5H8A3 153 aa5.94□□□□□ -1.46
LINC-ROR-201ENST00000553704 ACER2Q5QJU3 275 aa5.94□□□□□ -1.46
LINC-ROR-201ENST00000553704 SPINK14Q6IE38 97 aa5.94□□□□□ -1.46
LINC-ROR-201ENST00000553704 C20orf204Q6ZNR8 217 aa5.94□□□□□ -1.46
LINC-ROR-201ENST00000553704 COLCA1Q6ZS62 124 aa5.94□□□□□ -1.46
LINC-ROR-201ENST00000553704 ZNF295-AS1Q8N0V1 137 aa5.94□□□□□ -1.46
LINC-ROR-201ENST00000553704 COMMD1Q8N668 190 aa5.94□□□□□ -1.46
LINC-ROR-201ENST00000553704 OR2G3Q8NGZ4 309 aa5.94□□□□□ -1.46
LINC-ROR-201ENST00000553704 NANPQ8TBE9 248 aa5.94□□□□□ -1.46
LINC-ROR-201ENST00000553704 CT55Q8WUE5 264 aa5.94□□□□□ -1.46
LINC-ROR-201ENST00000553704 TMEM56Q96MV1 263 aa5.94□□□□□ -1.46
LINC-ROR-201ENST00000553704 PRDM14Q9GZV8 571 aa5.94□□□□□ -1.46
LINC-ROR-201ENST00000553704 ZNF552Q9H707 407 aaPredicted RBP5.94□□□□□ -1.46
LINC-ROR-201ENST00000553704 CCL28Q9NRJ3 127 aa5.94□□□□□ -1.46
LINC-ROR-201ENST00000553704 MTCH1Q9NZJ7 389 aa5.94□□□□□ -1.46
LINC-ROR-201ENST00000553704 ZNF391Q9UJN7 358 aa5.94□□□□□ -1.46
LINC-ROR-201ENST00000553704 TCFL5Q9UL49 500 aa5.94□□□□□ -1.46
LINC-ROR-201ENST00000553704 UBE2J1Q9Y385 318 aaPredicted RBP5.94□□□□□ -1.46
LINC-ROR-201ENST00000553704 STRAPQ9Y3F4 350 aaKnown RBP5.94□□□□□ -1.46
LINC-ROR-201ENST00000553704 R4GN57 208 aa5.94□□□□□ -1.46
LINC-ROR-201ENST00000553704 TMEM56-RWDD3S4R434 201 aa5.94□□□□□ -1.46
LINC-ROR-201ENST00000553704 DOCK7Q96N67 2140 aa5.93□□□□□ -1.46
LINC-ROR-201ENST00000553704 C5orf49A4QMS7 147 aa5.93□□□□□ -1.46
LINC-ROR-201ENST00000553704 UBE2CO00762 179 aa5.93□□□□□ -1.46
LINC-ROR-201ENST00000553704 NGFP01138 241 aa5.93□□□□□ -1.46
LINC-ROR-201ENST00000553704 MT-ND4LP03901 98 aa5.93□□□□□ -1.46
LINC-ROR-201ENST00000553704 FBP1P09467 338 aa5.93□□□□□ -1.46
LINC-ROR-201ENST00000553704 TDGF1P13385 188 aa5.93□□□□□ -1.46
LINC-ROR-201ENST00000553704 RAB5AP20339 215 aa5.93□□□□□ -1.46
LINC-ROR-201ENST00000553704 DYNLT3P51808 116 aa5.93□□□□□ -1.46
LINC-ROR-201ENST00000553704 OR2B8PP59922 312 aa5.93□□□□□ -1.46
LINC-ROR-201ENST00000553704 PCBD1P61457 104 aa5.93□□□□□ -1.46
LINC-ROR-201ENST00000553704 GNMTQ14749 295 aa5.93□□□□□ -1.46
LINC-ROR-201ENST00000553704 HMGN3Q15651 99 aa5.93□□□□□ -1.46
LINC-ROR-201ENST00000553704 IZUMO4Q1ZYL8 232 aa5.93□□□□□ -1.46
LINC-ROR-201ENST00000553704 EIF2S3LQ2VIR3 472 aaKnown RBP5.93□□□□□ -1.46
LINC-ROR-201ENST00000553704 MYPOPQ86VE0 399 aaPredicted RBP5.93□□□□□ -1.46
LINC-ROR-201ENST00000553704 ZNF695Q8IW36 515 aa5.93□□□□□ -1.46
LINC-ROR-201ENST00000553704 TMEM252Q8N6L7 170 aa5.93□□□□□ -1.46
LINC-ROR-201ENST00000553704 TMEM217Q8N7C4 229 aa5.93□□□□□ -1.46
LINC-ROR-201ENST00000553704 Q8NFD4 153 aa5.93□□□□□ -1.46
LINC-ROR-201ENST00000553704 OR5C1Q8NGR4 320 aa5.93□□□□□ -1.46
LINC-ROR-201ENST00000553704 PSMF1Q92530 271 aa5.93□□□□□ -1.46
LINC-ROR-201ENST00000553704 TAAR9Q96RI9 348 aa5.93□□□□□ -1.46
LINC-ROR-201ENST00000553704 SLC35B3Q9H1N7 401 aa5.93□□□□□ -1.46
LINC-ROR-201ENST00000553704 IFT22Q9H7X7 185 aa5.93□□□□□ -1.46
LINC-ROR-201ENST00000553704 LYRM2Q9NU23 88 aaPredicted RBP5.93□□□□□ -1.46
LINC-ROR-201ENST00000553704 TAAR3PQ9P1P4 343 aa5.93□□□□□ -1.46
LINC-ROR-201ENST00000553704 PUS1Q9Y606 427 aaKnown RBP eCLIP5.93□□□□□ -1.46
LINC-ROR-201ENST00000553704 H3BP45 60 aa5.93□□□□□ -1.46
LINC-ROR-201ENST00000553704 OR8U8P0C7N1 319 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms