RNA–Protein interactions for RNA: snR47

snR47, Transcript of C/D box small nucleolar RNA (snoRNA), yeast

Gene snR47, Length 99 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR47	snR47	UFO1	Q04511	668 aa		0.52	□□□□□ -2.33
snR47	snR47	THI22	Q06490	572 aa		0.52	□□□□□ -2.33
snR47	snR47	SPN1	Q06505	410 aa	Predicted RBP	0.52	□□□□□ -2.33
snR47	snR47	STP4	Q07351	490 aa		0.52	□□□□□ -2.33
snR47	snR47	MLH2	Q07980	695 aa		0.52	□□□□□ -2.33
snR47	snR47	ENV7	Q12003	364 aa		0.52	□□□□□ -2.33
snR47	snR47	CHS5	Q12114	671 aa	Known RBP	0.52	□□□□□ -2.33
snR47	snR47	RDL1	Q12305	139 aa	Known RBP	0.52	□□□□□ -2.33
snR47	snR47	YMR084W	A2P2R3	262 aa		0.51	□□□□□ -2.33
snR47	snR47	AGP1	P25376	633 aa		0.51	□□□□□ -2.33
snR47	snR47	MCM2	P29469	868 aa		0.51	□□□□□ -2.33
snR47	snR47	MRPL7	P36519	292 aa		0.51	□□□□□ -2.33
snR47	snR47	THI6	P41835	540 aa		0.51	□□□□□ -2.33
snR47	snR47	THI12	P42883	340 aa		0.51	□□□□□ -2.33
snR47	snR47	THI5	P43534	340 aa		0.51	□□□□□ -2.33
snR47	snR47	THI11	P47183	340 aa		0.51	□□□□□ -2.33
snR47	snR47	THI13	Q07748	340 aa		0.51	□□□□□ -2.33
snR47	snR47	ERG20	P08524	352 aa	Known RBP	0.5	□□□□□ -2.33
snR47	snR47	RPL42A	P0CX27	106 aa	Known RBP	0.5	□□□□□ -2.33
snR47	snR47	RPL42B	P0CX28	106 aa	Known RBP	0.5	□□□□□ -2.33
snR47	snR47	YFL068W	P0CX99	160 aa		0.5	□□□□□ -2.33
snR47	snR47	YLL066W-A	P0CY00	160 aa		0.5	□□□□□ -2.33
snR47	snR47	YLL067W-A	P0CY01	160 aa		0.5	□□□□□ -2.33
snR47	snR47	ACO1	P19414	778 aa	Known RBP RIP-Chip data	0.5	□□□□□ -2.33	not detected
snR47	snR47	AAR2	P32357	355 aa	Predicted RBP	0.5	□□□□□ -2.33
snR47	snR47	MSS1	P32559	526 aa	Predicted RBP	0.5	□□□□□ -2.33
snR47	snR47	LOT5	P34234	306 aa		0.5	□□□□□ -2.33
snR47	snR47	APT2	P36973	181 aa		0.5	□□□□□ -2.33
snR47	snR47	STM1	P39015	273 aa	Known RBP	0.5	□□□□□ -2.33
snR47	snR47	EXO1	P39875	702 aa		0.5	□□□□□ -2.33
snR47	snR47	PIG2	P40187	538 aa		0.5	□□□□□ -2.33
snR47	snR47	GID8	P40208	455 aa		0.5	□□□□□ -2.33
snR47	snR47	ZIP2	P53061	704 aa		0.5	□□□□□ -2.33
snR47	snR47	DIP5	P53388	608 aa		0.5	□□□□□ -2.33
snR47	snR47	LRS4	Q04087	347 aa	Known RBP	0.5	□□□□□ -2.33
snR47	snR47	SPR28	Q04921	423 aa		0.5	□□□□□ -2.33
snR47	snR47	YMR034C	Q05131	434 aa	Predicted RBP	0.5	□□□□□ -2.33
snR47	snR47	YLR352W	Q06479	807 aa		0.5	□□□□□ -2.33
snR47	snR47	ATX2	Q12067	313 aa		0.5	□□□□□ -2.33
snR47	snR47	RNR1	P21524	888 aa	Known RBP	0.49	□□□□□ -2.33
snR47	snR47	DAL7	P21826	554 aa		0.49	□□□□□ -2.33
snR47	snR47	YCL002C	P25565	263 aa		0.49	□□□□□ -2.33
snR47	snR47	SWH1	P35845	1188 aa		0.49	□□□□□ -2.33
snR47	snR47	YBR184W	P38299	523 aa		0.49	□□□□□ -2.33
snR47	snR47	SET5	P38890	526 aa	Known RBP	0.49	□□□□□ -2.33
snR47	snR47	YJL043W	P47053	257 aa		0.49	□□□□□ -2.33
snR47	snR47	NOP9	P47077	666 aa	Known RBP	0.49	□□□□□ -2.33
snR47	snR47	ZPS1	Q12512	249 aa		0.49	□□□□□ -2.33
snR47	snR47	CPA2	P03965	1118 aa	Known RBP	0.48	□□□□□ -2.33
snR47	snR47	VBA3	P25594	458 aa		0.48	□□□□□ -2.33
snR47	snR47	CPR3	P25719	182 aa		0.48	□□□□□ -2.33
snR47	snR47	VBA5	P36172	582 aa		0.48	□□□□□ -2.33
snR47	snR47	AVT5	P38176	459 aa		0.48	□□□□□ -2.33
snR47	snR47	RIM4	P38741	713 aa		0.48	□□□□□ -2.33
snR47	snR47	MTC6	P38849	526 aa		0.48	□□□□□ -2.33
snR47	snR47	YND1	P40009	630 aa		0.48	□□□□□ -2.33
snR47	snR47	KRI1	P42846	591 aa	Known RBP	0.48	□□□□□ -2.33
snR47	snR47	TAD1	P53065	400 aa		0.48	□□□□□ -2.33
snR47	snR47	DMA2	P53924	522 aa		0.48	□□□□□ -2.33
snR47	snR47	YNL018C	P53976	612 aa		0.48	□□□□□ -2.33
snR47	snR47	DAK1	P54838	584 aa	Known RBP	0.48	□□□□□ -2.33
snR47	snR47	TPO3	Q06451	622 aa		0.48	□□□□□ -2.33
snR47	snR47	YBR182C-A	Q8TGU6	64 aa		0.48	□□□□□ -2.33
snR47	snR47	HXT1	P32465	570 aa		0.47	□□□□□ -2.33
snR47	snR47	HBS1	P32769	611 aa	Known RBP	0.47	□□□□□ -2.33
snR47	snR47	TOM71	P38825	639 aa	Known RBP	0.47	□□□□□ -2.33
snR47	snR47	FYV10	P40492	516 aa		0.47	□□□□□ -2.33
snR47	snR47	SAD1	P43589	448 aa		0.47	□□□□□ -2.33
snR47	snR47	IRC7	P43623	340 aa		0.47	□□□□□ -2.33
snR47	snR47	SAE2	P46946	345 aa		0.47	□□□□□ -2.33
snR47	snR47	RFX1	P48743	811 aa		0.47	□□□□□ -2.33
snR47	snR47	TPO2	P53283	614 aa		0.47	□□□□□ -2.33
snR47	snR47	REC102	Q02721	264 aa		0.47	□□□□□ -2.33
snR47	snR47	RMD1	Q03441	430 aa		0.47	□□□□□ -2.33
snR47	snR47	SHE9	Q04172	456 aa		0.47	□□□□□ -2.33
snR47	snR47	CDC23	P16522	626 aa		0.46	□□□□□ -2.34
snR47	snR47	FEN2	P25621	512 aa	Known RBP	0.46	□□□□□ -2.34
snR47	snR47	COQ3	P27680	312 aa		0.46	□□□□□ -2.34
snR47	snR47	RPT3	P33298	428 aa	Known RBP	0.46	□□□□□ -2.34
snR47	snR47	RKM3	P38222	552 aa		0.46	□□□□□ -2.34
snR47	snR47	TDA10	P42938	290 aa		0.46	□□□□□ -2.34
snR47	snR47	YJR107W	P47145	328 aa		0.46	□□□□□ -2.34
snR47	snR47	BET4	Q00618	327 aa		0.46	□□□□□ -2.34
snR47	snR47	VTC3	Q02725	835 aa		0.46	□□□□□ -2.34
snR47	snR47	YLR281C	Q05863	155 aa		0.46	□□□□□ -2.34
snR47	snR47	SEC3	P33332	1336 aa	Known RBP	0.45	□□□□□ -2.34
snR47	snR47	NTH1	P32356	751 aa		0.45	□□□□□ -2.34
snR47	snR47	SRP40	P32583	406 aa	Predicted RBP	0.45	□□□□□ -2.34
snR47	snR47	AKL1	P38080	1108 aa	Known RBP	0.45	□□□□□ -2.34
snR47	snR47	PIH1	P38768	344 aa		0.45	□□□□□ -2.34
snR47	snR47	RSC8	P43609	557 aa	Known RBP	0.45	□□□□□ -2.34
snR47	snR47	COQ6	P53318	479 aa		0.45	□□□□□ -2.34
snR47	snR47	NAN1	Q02931	896 aa	Known RBP	0.45	□□□□□ -2.34
snR47	snR47	SND1	Q04007	877 aa		0.45	□□□□□ -2.34
snR47	snR47	DIA2	Q08496	732 aa	Predicted RBP	0.45	□□□□□ -2.34
snR47	snR47	SSA1	P10591	642 aa	Known RBP	0.44	□□□□□ -2.34
snR47	snR47	CBS2	P14905	389 aa		0.44	□□□□□ -2.34
snR47	snR47	SEC20	P28791	383 aa		0.44	□□□□□ -2.34
snR47	snR47	EMC3	P36039	253 aa		0.44	□□□□□ -2.34
snR47	snR47	ELF1	P36053	145 aa		0.44	□□□□□ -2.34

Retrieved 100 of 5,963 RNA–protein pairs in 41.9 ms