RNA–Protein interactions for RNA: snR11

snR11, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeast

Gene snR11, Length 258 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR11	snR11	PRP28	P23394	588 aa		4.64	□□□□□ -1.67
snR11	snR11	FEN2	P25621	512 aa	Known RBP	4.64	□□□□□ -1.67
snR11	snR11	PIG2	P40187	538 aa		4.64	□□□□□ -1.67
snR11	snR11	ARG2	P40360	574 aa		4.64	□□□□□ -1.67
snR11	snR11	ATG36	P46983	293 aa		4.64	□□□□□ -1.67
snR11	snR11	MNN11	P46985	422 aa	Known RBP	4.64	□□□□□ -1.67
snR11	snR11	ATG4	P53867	494 aa		4.64	□□□□□ -1.67
snR11	snR11	NOP15	P53927	220 aa	Predicted RBP	4.64	□□□□□ -1.67
snR11	snR11	YMR210W	Q03649	449 aa		4.64	□□□□□ -1.67
snR11	snR11	HFD1	Q04458	532 aa		4.64	□□□□□ -1.67
snR11	snR11	FAP7	Q12055	197 aa	Predicted RBP	4.64	□□□□□ -1.67
snR11	snR11	USV1	Q12132	391 aa		4.64	□□□□□ -1.67
snR11	snR11	RPS17A	P02407	136 aa	Known RBP	4.63	□□□□□ -1.67
snR11	snR11	RPS17B	P14127	136 aa	Known RBP	4.63	□□□□□ -1.67
snR11	snR11	SEC65	P29478	273 aa		4.63	□□□□□ -1.67
snR11	snR11	SET3	P36124	751 aa		4.63	□□□□□ -1.67
snR11	snR11	FAT1	P38225	669 aa		4.63	□□□□□ -1.67
snR11	snR11	BDH2	P39713	417 aa		4.63	□□□□□ -1.67
snR11	snR11	IES1	P43579	692 aa		4.63	□□□□□ -1.67
snR11	snR11	BFA1	P47113	574 aa		4.63	□□□□□ -1.67
snR11	snR11	RFX1	P48743	811 aa		4.63	□□□□□ -1.67
snR11	snR11	STP4	Q07351	490 aa		4.63	□□□□□ -1.67
snR11	snR11	RPS21A	P0C0V8	87 aa	Known RBP	4.62	□□□□□ -1.67
snR11	snR11	KIN82	P25341	720 aa		4.62	□□□□□ -1.67
snR11	snR11	MSS1	P32559	526 aa	Predicted RBP	4.62	□□□□□ -1.67
snR11	snR11	DID4	P36108	232 aa		4.62	□□□□□ -1.67
snR11	snR11	YJL206C	P39529	758 aa		4.62	□□□□□ -1.67
snR11	snR11	YIL077C	P40508	320 aa		4.62	□□□□□ -1.67
snR11	snR11	BUD8	P41698	603 aa		4.62	□□□□□ -1.67
snR11	snR11	YHM2	Q04013	314 aa		4.62	□□□□□ -1.67
snR11	snR11	VBA4	Q04602	768 aa	Known RBP	4.62	□□□□□ -1.67
snR11	snR11	SUT2	Q12286	268 aa		4.62	□□□□□ -1.67
snR11	snR11	KIN3	P22209	435 aa		4.61	□□□□□ -1.67
snR11	snR11	GRX4	P32642	244 aa		4.61	□□□□□ -1.67
snR11	snR11	MPS3	P47069	682 aa		4.61	□□□□□ -1.67
snR11	snR11	VPS73	P53142	486 aa	Known RBP	4.61	□□□□□ -1.67
snR11	snR11	GLN4	P13188	809 aa	Known RBP	4.6	□□□□□ -1.67
snR11	snR11	CDC26	P14724	124 aa		4.6	□□□□□ -1.67
snR11	snR11	COS111	P38308	924 aa		4.6	□□□□□ -1.67
snR11	snR11	TDP1	P38319	544 aa		4.6	□□□□□ -1.67
snR11	snR11	SPO1	P53541	631 aa		4.6	□□□□□ -1.67
snR11	snR11	PTA1	Q01329	785 aa	Predicted RBP	4.6	□□□□□ -1.67
snR11	snR11	YFT2	Q06676	274 aa		4.6	□□□□□ -1.67
snR11	snR11	CDC43	P18898	376 aa		4.59	□□□□□ -1.67
snR11	snR11	CTP1	P38152	299 aa		4.59	□□□□□ -1.67
snR11	snR11	YEN1	P40028	759 aa		4.59	□□□□□ -1.67
snR11	snR11	VID28	P40547	921 aa		4.59	□□□□□ -1.67
snR11	snR11	PXA1	P41909	870 aa		4.59	□□□□□ -1.67
snR11	snR11	TAH11	P47112	604 aa		4.59	□□□□□ -1.67
snR11	snR11	CTR1	P49573	406 aa		4.59	□□□□□ -1.67
snR11	snR11	YGR151C	P53287	111 aa		4.59	□□□□□ -1.67
snR11	snR11	NSE5	Q03718	556 aa		4.59	□□□□□ -1.67
snR11	snR11	RPS9B	P05755	195 aa	Known RBP	4.58	□□□□□ -1.68
snR11	snR11	GFA1	P14742	717 aa	Known RBP	4.58	□□□□□ -1.68
snR11	snR11	PRP22	P24384	1145 aa	Known RBP	4.58	□□□□□ -1.68
snR11	snR11	DMC1	P25453	334 aa		4.58	□□□□□ -1.68
snR11	snR11	FUB1	P25659	250 aa		4.58	□□□□□ -1.68
snR11	snR11	GLG1	P36143	616 aa		4.58	□□□□□ -1.68
snR11	snR11	KHA1	P40309	873 aa		4.58	□□□□□ -1.68
snR11	snR11	DUG1	P43616	481 aa	Known RBP	4.58	□□□□□ -1.68
snR11	snR11	PPN1	Q04119	674 aa		4.58	□□□□□ -1.68
snR11	snR11	YSH1	Q06224	779 aa	Predicted RBP	4.58	□□□□□ -1.68
snR11	snR11	YDL086W	Q07505	273 aa		4.58	□□□□□ -1.68
snR11	snR11	BMS1	Q08965	1183 aa	Known RBP	4.58	□□□□□ -1.68
snR11	snR11	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	not detected
snR11	snR11	MF(ALPHA)2	P32435	120 aa		4.57	□□□□□ -1.68
snR11	snR11	SER1	P33330	395 aa	Known RBP	4.57	□□□□□ -1.68
snR11	snR11	YHR097C	P38809	366 aa	Known RBP	4.57	□□□□□ -1.68
snR11	snR11	DUN1	P39009	513 aa		4.57	□□□□□ -1.68
snR11	snR11	GPP2	P40106	250 aa	Known RBP	4.57	□□□□□ -1.68
snR11	snR11	TAF4	P50105	388 aa		4.57	□□□□□ -1.68
snR11	snR11	SNF12	P53628	566 aa		4.57	□□□□□ -1.68
snR11	snR11	IZH3	Q07959	543 aa		4.57	□□□□□ -1.68
snR11	snR11	ABF1	P14164	731 aa		4.56	□□□□□ -1.68
snR11	snR11	HCA4	P20448	770 aa	Known RBP	4.56	□□□□□ -1.68
snR11	snR11	SEC15	P22224	910 aa		4.56	□□□□□ -1.68
snR11	snR11	PRE4	P30657	266 aa		4.56	□□□□□ -1.68
snR11	snR11	NTH1	P32356	751 aa		4.56	□□□□□ -1.68
snR11	snR11	DAL3	P32459	195 aa		4.56	□□□□□ -1.68
snR11	snR11	MTC7	P32633	139 aa		4.56	□□□□□ -1.68
snR11	snR11	EMP70	P32802	667 aa		4.56	□□□□□ -1.68
snR11	snR11	KSP1	P38691	1029 aa	Known RBP	4.56	□□□□□ -1.68
snR11	snR11	PRM2	P40534	656 aa		4.56	□□□□□ -1.68
snR11	snR11	NIT2	P47016	307 aa		4.56	□□□□□ -1.68
snR11	snR11	FDC1	Q03034	503 aa		4.56	□□□□□ -1.68
snR11	snR11	RKI1	Q12189	258 aa		4.56	□□□□□ -1.68
snR11	snR11	HXT4	P32467	576 aa		4.55	□□□□□ -1.68
snR11	snR11	EUG1	P32474	517 aa		4.55	□□□□□ -1.68
snR11	snR11	GMH1	P36125	273 aa		4.55	□□□□□ -1.68
snR11	snR11	CDS1	P38221	457 aa		4.55	□□□□□ -1.68
snR11	snR11	CRG1	P38892	291 aa	RIP-Chip data	4.55	□□□□□ -1.68	not detected
snR11	snR11	YIL166C	P40445	542 aa		4.55	□□□□□ -1.68
snR11	snR11	YJR008W	P47085	338 aa		4.55	□□□□□ -1.68
snR11	snR11	GIS1	Q03833	894 aa		4.55	□□□□□ -1.68
snR11	snR11	HLR1	Q04429	423 aa		4.55	□□□□□ -1.68
snR11	snR11	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.55	□□□□□ -1.68	not detected
snR11	snR11	TUP1	P16649	713 aa		4.54	□□□□□ -1.68
snR11	snR11	MIT1	P40002	666 aa		4.54	□□□□□ -1.68
snR11	snR11	ENP2	P48234	707 aa	Known RBP	4.54	□□□□□ -1.68
snR11	snR11	RNR4	P49723	345 aa	Known RBP	4.54	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 18.6 ms