RNA–Protein interactions for RNA: YPL275W

FDH2, Transcript of NAD(+)-dependent formate dehydrogenase, yeast

Gene FDH2, Length 711 nt, Biotype pseudogene.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FDH2	YPL275W	GUD1	Q07729	489 aa		4.74	□□□□□ -1.65
FDH2	YPL275W	SSZ1	P38788	538 aa	Known RBP	4.73	□□□□□ -1.65
FDH2	YPL275W	LYS9	P38999	446 aa		4.73	□□□□□ -1.65
FDH2	YPL275W	YJL163C	P46996	555 aa		4.73	□□□□□ -1.65
FDH2	YPL275W	YJR039W	P47107	1121 aa		4.73	□□□□□ -1.65
FDH2	YPL275W	YBP2	P53169	641 aa		4.73	□□□□□ -1.65
FDH2	YPL275W	SDA1	P53313	767 aa	Known RBP	4.73	□□□□□ -1.65
FDH2	YPL275W	GAD1	Q04792	585 aa		4.73	□□□□□ -1.65
FDH2	YPL275W	ENT1	Q12518	454 aa		4.73	□□□□□ -1.65
FDH2	YPL275W	AIM44	Q99299	758 aa		4.73	□□□□□ -1.65
FDH2	YPL275W	CFT1	Q06632	1357 aa	Known RBP	4.73	□□□□□ -1.65
FDH2	YPL275W	OAR1	P35731	278 aa		4.72	□□□□□ -1.65
FDH2	YPL275W	MNN4	P36044	1178 aa		4.72	□□□□□ -1.65
FDH2	YPL275W	BRN1	P38170	754 aa		4.72	□□□□□ -1.65
FDH2	YPL275W	YJR096W	P47137	282 aa		4.72	□□□□□ -1.65
FDH2	YPL275W	YNR029C	P53729	429 aa	Known RBP	4.72	□□□□□ -1.65
FDH2	YPL275W	IRC13	Q08630	104 aa		4.72	□□□□□ -1.65
FDH2	YPL275W	YGR161W-C	Q3E744	92 aa		4.72	□□□□□ -1.65
FDH2	YPL275W	HRP1	Q99383	534 aa	Known RBP	4.72	□□□□□ -1.65
FDH2	YPL275W	YRF1-2	P40105	1681 aa		4.72	□□□□□ -1.65
FDH2	YPL275W	ERG6	P25087	383 aa	Known RBP	4.71	□□□□□ -1.66
FDH2	YPL275W	PPS1	P38148	807 aa		4.71	□□□□□ -1.66
FDH2	YPL275W	BCD1	P38772	366 aa		4.71	□□□□□ -1.66
FDH2	YPL275W	IMH1	Q06704	911 aa	Known RBP	4.71	□□□□□ -1.66
FDH2	YPL275W	GCN2	P15442	1659 aa		4.7	□□□□□ -1.66
FDH2	YPL275W	SIR3	P06701	978 aa		4.7	□□□□□ -1.66
FDH2	YPL275W	TRZ1	P36159	838 aa	Predicted RBP	4.7	□□□□□ -1.66
FDH2	YPL275W	AKL1	P38080	1108 aa	Known RBP	4.7	□□□□□ -1.66
FDH2	YPL275W	MOH1	P38191	138 aa		4.7	□□□□□ -1.66
FDH2	YPL275W	BEM4	P39011	633 aa		4.7	□□□□□ -1.66
FDH2	YPL275W	NOP2	P40991	618 aa	Known RBP	4.7	□□□□□ -1.66
FDH2	YPL275W	SET2	P46995	733 aa	Known RBP	4.7	□□□□□ -1.66
FDH2	YPL275W	UBC11	P52492	156 aa		4.7	□□□□□ -1.66
FDH2	YPL275W	GPG1	P53130	126 aa		4.7	□□□□□ -1.66
FDH2	YPL275W	MTL1	P53214	551 aa		4.7	□□□□□ -1.66
FDH2	YPL275W	MUK1	Q02866	612 aa		4.7	□□□□□ -1.66
FDH2	YPL275W	THI73	Q07904	523 aa		4.7	□□□□□ -1.66
FDH2	YPL275W	HIR1	P32479	840 aa		4.69	□□□□□ -1.66
FDH2	YPL275W	APT2	P36973	181 aa		4.69	□□□□□ -1.66
FDH2	YPL275W	APN2	P38207	520 aa		4.69	□□□□□ -1.66
FDH2	YPL275W	FMO1	P38866	432 aa		4.69	□□□□□ -1.66
FDH2	YPL275W	CKB2	P38930	258 aa		4.69	□□□□□ -1.66
FDH2	YPL275W	CCT3	P39077	534 aa	Known RBP	4.69	□□□□□ -1.66
FDH2	YPL275W	FMP52	P40008	231 aa		4.69	□□□□□ -1.66
FDH2	YPL275W	NUG1	P40010	520 aa	Known RBP	4.69	□□□□□ -1.66
FDH2	YPL275W	GET2	P40056	285 aa		4.69	□□□□□ -1.66
FDH2	YPL275W	RET2	P43621	546 aa		4.69	□□□□□ -1.66
FDH2	YPL275W	HLJ1	P48353	224 aa		4.69	□□□□□ -1.66
FDH2	YPL275W	REC102	Q02721	264 aa		4.69	□□□□□ -1.66
FDH2	YPL275W	RGC1	Q06108	1083 aa	Known RBP	4.69	□□□□□ -1.66
FDH2	YPL275W	PYC1	P11154	1178 aa	Known RBP	4.68	□□□□□ -1.66
FDH2	YPL275W	RNR1	P21524	888 aa	Known RBP	4.68	□□□□□ -1.66
FDH2	YPL275W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.68	□□□□□ -1.66	not detected
FDH2	YPL275W	CRP1	P38845	465 aa	Known RBP	4.68	□□□□□ -1.66
FDH2	YPL275W	DAS1	P47005	663 aa		4.68	□□□□□ -1.66
FDH2	YPL275W	YGL081W	P53156	320 aa		4.68	□□□□□ -1.66
FDH2	YPL275W	UME1	Q03010	460 aa		4.68	□□□□□ -1.66
FDH2	YPL275W	MTQ2	Q03920	221 aa	Predicted RBP	4.68	□□□□□ -1.66
FDH2	YPL275W	RRP5	Q05022	1729 aa	Known RBP	4.67	□□□□□ -1.66
FDH2	YPL275W	YPT7	P32939	208 aa		4.67	□□□□□ -1.66
FDH2	YPL275W	MAL31	P38156	614 aa		4.67	□□□□□ -1.66
FDH2	YPL275W	YHL017W	P38745	532 aa		4.67	□□□□□ -1.66
FDH2	YPL275W	NUP60	P39705	539 aa		4.67	□□□□□ -1.66
FDH2	YPL275W	CCT5	P40413	562 aa	Known RBP	4.67	□□□□□ -1.66
FDH2	YPL275W	NOP9	P47077	666 aa	Known RBP	4.67	□□□□□ -1.66
FDH2	YPL275W	PMT3	P47190	753 aa		4.67	□□□□□ -1.66
FDH2	YPL275W	STB4	P50104	949 aa		4.67	□□□□□ -1.66
FDH2	YPL275W	TEL2	P53038	688 aa		4.67	□□□□□ -1.66
FDH2	YPL275W	CTK1	Q03957	528 aa	Known RBP	4.67	□□□□□ -1.66
FDH2	YPL275W	SGO1	Q08490	590 aa		4.67	□□□□□ -1.66
FDH2	YPL275W	ACF2	Q12168	779 aa		4.67	□□□□□ -1.66
FDH2	YPL275W	NUP192	P47054	1683 aa		4.67	□□□□□ -1.66
FDH2	YPL275W	SEC6	P32844	805 aa		4.66	□□□□□ -1.66
FDH2	YPL275W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.66	□□□□□ -1.66	not detected
FDH2	YPL275W	UBP12	P39538	1254 aa		4.66	□□□□□ -1.66
FDH2	YPL275W	NUP145	P49687	1317 aa		4.66	□□□□□ -1.66
FDH2	YPL275W	TY3B-I	Q7LHG5	1498 aa	Known RBP	4.65	□□□□□ -1.66
FDH2	YPL275W	SWI6	P09959	803 aa		4.65	□□□□□ -1.67
FDH2	YPL275W	PEX1	P24004	1043 aa		4.65	□□□□□ -1.67
FDH2	YPL275W	PRP19	P32523	503 aa	Known RBP	4.65	□□□□□ -1.67
FDH2	YPL275W	YHR202W	P38887	602 aa		4.65	□□□□□ -1.67
FDH2	YPL275W	YNL195C	P40168	261 aa		4.65	□□□□□ -1.67
FDH2	YPL275W	FHN1	P53279	174 aa		4.65	□□□□□ -1.67
FDH2	YPL275W	ECM9	Q02202	377 aa		4.65	□□□□□ -1.67
FDH2	YPL275W	YMR206W	Q03695	313 aa		4.65	□□□□□ -1.67
FDH2	YPL275W	TMN2	Q04562	672 aa		4.65	□□□□□ -1.67
FDH2	YPL275W	THI22	Q06490	572 aa		4.65	□□□□□ -1.67
FDH2	YPL275W	MCH5	Q08777	521 aa		4.65	□□□□□ -1.67
FDH2	YPL275W	IMG2	P25642	146 aa	Predicted RBP	4.64	□□□□□ -1.67
FDH2	YPL275W	HIS7	P33734	552 aa	Known RBP	4.64	□□□□□ -1.67
FDH2	YPL275W	TDA3	P38758	523 aa		4.64	□□□□□ -1.67
FDH2	YPL275W	HXT6	P39003	570 aa	Known RBP	4.64	□□□□□ -1.67
FDH2	YPL275W	HXT7	P39004	570 aa		4.64	□□□□□ -1.67
FDH2	YPL275W	GPP1	P41277	250 aa	Known RBP	4.64	□□□□□ -1.67
FDH2	YPL275W	GZF3	P42944	551 aa	Known RBP	4.64	□□□□□ -1.67
FDH2	YPL275W	YGR153W	P48238	217 aa		4.64	□□□□□ -1.67
FDH2	YPL275W	PAN2	P53010	1115 aa	Predicted RBP	4.64	□□□□□ -1.67
FDH2	YPL275W	YAP1802	P53309	568 aa		4.64	□□□□□ -1.67
FDH2	YPL275W	GPD1	Q00055	391 aa	Known RBP	4.64	□□□□□ -1.67
FDH2	YPL275W	APM4	Q99186	491 aa		4.64	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 11.3 ms