RNA–Protein interactions for RNA: YOR258W

HNT3, Transcript of DNA 5' AMP hydrolase involved in DNA repair, yeast

Gene HNT3, Length 654 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HNT3	YOR258W	RMP1	Q12530	201 aa		4.43	□□□□□ -1.7
HNT3	YOR258W	GAL1	P04385	528 aa		4.42	□□□□□ -1.7
HNT3	YOR258W	PGI1	P12709	554 aa	Known RBP	4.42	□□□□□ -1.7
HNT3	YOR258W	NIC96	P34077	839 aa		4.42	□□□□□ -1.7
HNT3	YOR258W	TDA3	P38758	523 aa		4.42	□□□□□ -1.7
HNT3	YOR258W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.42	□□□□□ -1.7	not detected
HNT3	YOR258W	RLP7	P40693	322 aa	Known RBP	4.42	□□□□□ -1.7
HNT3	YOR258W	BAP3	P41815	604 aa		4.42	□□□□□ -1.7
HNT3	YOR258W	GLO1	P50107	326 aa		4.42	□□□□□ -1.7
HNT3	YOR258W	ZIP2	P53061	704 aa		4.42	□□□□□ -1.7
HNT3	YOR258W	YGR021W	P53212	290 aa		4.42	□□□□□ -1.7
HNT3	YOR258W	ECM9	Q02202	377 aa		4.42	□□□□□ -1.7
HNT3	YOR258W	GPR1	Q12361	961 aa		4.42	□□□□□ -1.7
HNT3	YOR258W	YKL033W-A	Q86ZR7	236 aa		4.42	□□□□□ -1.7
HNT3	YOR258W	YBR182C-A	Q8TGU6	64 aa		4.42	□□□□□ -1.7
HNT3	YOR258W	RPN13	O13563	156 aa		4.41	□□□□□ -1.7
HNT3	YOR258W	DIF1	O13577	133 aa		4.41	□□□□□ -1.7
HNT3	YOR258W	CCR4	P31384	837 aa	Known RBP	4.41	□□□□□ -1.7
HNT3	YOR258W	HSL7	P38274	827 aa		4.41	□□□□□ -1.7
HNT3	YOR258W	SFB3	P38810	929 aa		4.41	□□□□□ -1.7
HNT3	YOR258W	YEL020C	P39994	560 aa		4.41	□□□□□ -1.7
HNT3	YOR258W	RET2	P43621	546 aa		4.41	□□□□□ -1.7
HNT3	YOR258W	PRP31	P49704	494 aa	Predicted RBP	4.41	□□□□□ -1.7
HNT3	YOR258W	PAN2	P53010	1115 aa	Predicted RBP	4.41	□□□□□ -1.7
HNT3	YOR258W	SPC105	P53148	917 aa		4.41	□□□□□ -1.7
HNT3	YOR258W	UBX4	P54730	416 aa		4.41	□□□□□ -1.7
HNT3	YOR258W	PHM6	Q05637	104 aa		4.41	□□□□□ -1.7
HNT3	YOR258W	Q0142	Q9ZZW4	58 aa		4.41	□□□□□ -1.7
HNT3	YOR258W	RPS21A	P0C0V8	87 aa	Known RBP	4.4	□□□□□ -1.71
HNT3	YOR258W	MVD1	P32377	396 aa	Known RBP	4.4	□□□□□ -1.71
HNT3	YOR258W	YKR051W	P36142	418 aa		4.4	□□□□□ -1.71
HNT3	YOR258W	BIT2	P38346	545 aa		4.4	□□□□□ -1.71
HNT3	YOR258W	CCT3	P39077	534 aa	Known RBP	4.4	□□□□□ -1.71
HNT3	YOR258W	IES5	P40060	125 aa		4.4	□□□□□ -1.71
HNT3	YOR258W	CCT5	P40413	562 aa	Known RBP	4.4	□□□□□ -1.71
HNT3	YOR258W	NPY1	P53164	384 aa		4.4	□□□□□ -1.71
HNT3	YOR258W	MTL1	P53214	551 aa		4.4	□□□□□ -1.71
HNT3	YOR258W	SEC5	P89102	971 aa		4.4	□□□□□ -1.71
HNT3	YOR258W	CTK1	Q03957	528 aa	Known RBP	4.4	□□□□□ -1.71
HNT3	YOR258W	YHM2	Q04013	314 aa		4.4	□□□□□ -1.71
HNT3	YOR258W	MRI1	Q06489	411 aa	Known RBP	4.4	□□□□□ -1.71
HNT3	YOR258W	RPS21B	Q3E754	87 aa	Known RBP	4.4	□□□□□ -1.71
HNT3	YOR258W	KCC4	P25389	1037 aa		4.39	□□□□□ -1.71
HNT3	YOR258W	PTP2	P29461	750 aa		4.39	□□□□□ -1.71
HNT3	YOR258W	HEM12	P32347	362 aa	Predicted RBP	4.39	□□□□□ -1.71
HNT3	YOR258W	TMT1	P32643	299 aa		4.39	□□□□□ -1.71
HNT3	YOR258W	ORC2	P32833	620 aa		4.39	□□□□□ -1.71
HNT3	YOR258W	SER1	P33330	395 aa	Known RBP	4.39	□□□□□ -1.71
HNT3	YOR258W	DID4	P36108	232 aa		4.39	□□□□□ -1.71
HNT3	YOR258W	ARG2	P40360	574 aa		4.39	□□□□□ -1.71
HNT3	YOR258W	ECM38	Q05902	660 aa	Predicted RBP	4.39	□□□□□ -1.71
HNT3	YOR258W	SIR3	P06701	978 aa		4.38	□□□□□ -1.71
HNT3	YOR258W	PYC1	P11154	1178 aa	Known RBP	4.38	□□□□□ -1.71
HNT3	YOR258W	APA1	P16550	321 aa	Known RBP	4.38	□□□□□ -1.71
HNT3	YOR258W	COX11	P19516	300 aa	Known RBP	4.38	□□□□□ -1.71
HNT3	YOR258W	RPA135	P22138	1203 aa	Known RBP	4.38	□□□□□ -1.71
HNT3	YOR258W	HXT6	P39003	570 aa	Known RBP	4.38	□□□□□ -1.71
HNT3	YOR258W	HXT7	P39004	570 aa		4.38	□□□□□ -1.71
HNT3	YOR258W	YFL052W	P43551	465 aa		4.38	□□□□□ -1.71
HNT3	YOR258W	RSC8	P43609	557 aa	Known RBP	4.38	□□□□□ -1.71
HNT3	YOR258W	SVL3	Q03088	825 aa	Known RBP	4.38	□□□□□ -1.71
HNT3	YOR258W	YPR027C	Q12079	277 aa		4.38	□□□□□ -1.71
HNT3	YOR258W	DPB3	P27344	201 aa		4.37	□□□□□ -1.71
HNT3	YOR258W	YKL133C	P36066	463 aa		4.37	□□□□□ -1.71
HNT3	YOR258W	TRZ1	P36159	838 aa	Predicted RBP	4.37	□□□□□ -1.71
HNT3	YOR258W	UBS1	P38290	277 aa		4.37	□□□□□ -1.71
HNT3	YOR258W	RIM4	P38741	713 aa		4.37	□□□□□ -1.71
HNT3	YOR258W	HIS6	P40545	261 aa		4.37	□□□□□ -1.71
HNT3	YOR258W	SLD3	P53135	668 aa		4.37	□□□□□ -1.71
HNT3	YOR258W	SKY1	Q03656	742 aa		4.37	□□□□□ -1.71
HNT3	YOR258W	RPN7	Q06103	429 aa	Known RBP	4.37	□□□□□ -1.71
HNT3	YOR258W	MLC2	Q06580	163 aa		4.37	□□□□□ -1.71
HNT3	YOR258W	HOM2	P13663	365 aa	Known RBP	4.36	□□□□□ -1.71
HNT3	YOR258W	YKU70	P32807	602 aa		4.36	□□□□□ -1.71
HNT3	YOR258W	MRS6	P32864	603 aa	Known RBP	4.36	□□□□□ -1.71
HNT3	YOR258W	MNN4	P36044	1178 aa		4.36	□□□□□ -1.71
HNT3	YOR258W	FAT1	P38225	669 aa		4.36	□□□□□ -1.71
HNT3	YOR258W	YHR112C	P38716	378 aa		4.36	□□□□□ -1.71
HNT3	YOR258W	FMO1	P38866	432 aa		4.36	□□□□□ -1.71
HNT3	YOR258W	BDH2	P39713	417 aa		4.36	□□□□□ -1.71
HNT3	YOR258W	ECM1	P39715	212 aa		4.36	□□□□□ -1.71
HNT3	YOR258W	PTA1	Q01329	785 aa	Predicted RBP	4.36	□□□□□ -1.71
HNT3	YOR258W	RRP6	Q12149	733 aa	Known RBP	4.36	□□□□□ -1.71
HNT3	YOR258W	NKP1	Q12493	238 aa		4.36	□□□□□ -1.71
HNT3	YOR258W	YLR149C	Q99296	730 aa		4.36	□□□□□ -1.71
HNT3	YOR258W	SEC65	P29478	273 aa		4.35	□□□□□ -1.71
HNT3	YOR258W	PHO11	P35842	467 aa		4.35	□□□□□ -1.71
HNT3	YOR258W	PHO12	P38693	467 aa		4.35	□□□□□ -1.71
HNT3	YOR258W	YHL041W	P38730	149 aa		4.35	□□□□□ -1.71
HNT3	YOR258W	NUP60	P39705	539 aa		4.35	□□□□□ -1.71
HNT3	YOR258W	VID27	P40157	782 aa		4.35	□□□□□ -1.71
HNT3	YOR258W	TAN1	P53072	289 aa	Predicted RBP	4.35	□□□□□ -1.71
HNT3	YOR258W	ATG4	P53867	494 aa		4.35	□□□□□ -1.71
HNT3	YOR258W	TMA64	Q04600	565 aa	Known RBP	4.35	□□□□□ -1.71
HNT3	YOR258W	HFI1	Q12060	488 aa		4.35	□□□□□ -1.71
HNT3	YOR258W	ADE2	P21264	571 aa	Known RBP	4.34	□□□□□ -1.71
HNT3	YOR258W	ATP12	P22135	325 aa		4.34	□□□□□ -1.71
HNT3	YOR258W	VPS34	P22543	875 aa		4.34	□□□□□ -1.71
HNT3	YOR258W	OAF3	P36023	863 aa		4.34	□□□□□ -1.71
HNT3	YOR258W	EXO84	P38261	753 aa		4.34	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms