RNA–Protein interactions for RNA: YOR216C

RUD3, Transcript of Golgi matrix protein, yeast

Gene RUD3, Length 1,455 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RUD3	YOR216C	DIP5	P53388	608 aa		3.71	□□□□□ -1.82
RUD3	YOR216C	SNF12	P53628	566 aa		3.71	□□□□□ -1.82
RUD3	YOR216C	SNP1	Q00916	300 aa	Predicted RBP	3.71	□□□□□ -1.82
RUD3	YOR216C	YIL077C	P40508	320 aa		3.7	□□□□□ -1.82
RUD3	YOR216C	MAL11	P53048	616 aa		3.7	□□□□□ -1.82
RUD3	YOR216C	YGL117W	P53133	265 aa		3.7	□□□□□ -1.82
RUD3	YOR216C	NGL2	Q03264	515 aa	Known RBP	3.7	□□□□□ -1.82
RUD3	YOR216C	VBA3	P25594	458 aa		3.69	□□□□□ -1.82
RUD3	YOR216C	APN2	P38207	520 aa		3.69	□□□□□ -1.82
RUD3	YOR216C	CAF16	P43569	289 aa		3.69	□□□□□ -1.82
RUD3	YOR216C	SET2	P46995	733 aa	Known RBP	3.69	□□□□□ -1.82
RUD3	YOR216C	UFO1	Q04511	668 aa		3.69	□□□□□ -1.82
RUD3	YOR216C	LEU2	P04173	364 aa	Predicted RBP	3.68	□□□□□ -1.82
RUD3	YOR216C	CDC9	P04819	755 aa		3.68	□□□□□ -1.82
RUD3	YOR216C	HSL7	P38274	827 aa		3.68	□□□□□ -1.82
RUD3	YOR216C	BRE5	P53741	515 aa	Known RBP	3.68	□□□□□ -1.82
RUD3	YOR216C	ORM2	Q06144	216 aa		3.68	□□□□□ -1.82
RUD3	YOR216C	YFT2	Q06676	274 aa		3.68	□□□□□ -1.82
RUD3	YOR216C	IRC3	Q06683	689 aa		3.68	□□□□□ -1.82
RUD3	YOR216C	EUG1	P32474	517 aa		3.67	□□□□□ -1.82
RUD3	YOR216C	YJL049W	P47048	450 aa		3.67	□□□□□ -1.82
RUD3	YOR216C	CPR8	P53728	308 aa		3.67	□□□□□ -1.82
RUD3	YOR216C	NEW1	Q08972	1196 aa	Known RBP	3.67	□□□□□ -1.82
RUD3	YOR216C	BEM3	P32873	1128 aa		3.67	□□□□□ -1.82
RUD3	YOR216C	COS111	P38308	924 aa		3.67	□□□□□ -1.82
RUD3	YOR216C	GIS2	P53849	153 aa	Known RBP RIP-Chip data	3.67	□□□□□ -1.82	not detected
RUD3	YOR216C	NHX1	Q04121	633 aa		3.67	□□□□□ -1.82
RUD3	YOR216C	VPS36	Q06696	566 aa		3.67	□□□□□ -1.82
RUD3	YOR216C	POM34	Q12445	299 aa		3.67	□□□□□ -1.82
RUD3	YOR216C	NTH1	P32356	751 aa		3.66	□□□□□ -1.82
RUD3	YOR216C	ELF1	P36053	145 aa		3.66	□□□□□ -1.82
RUD3	YOR216C	PXL1	P36166	706 aa		3.66	□□□□□ -1.82
RUD3	YOR216C	CCT4	P39078	528 aa	Known RBP	3.66	□□□□□ -1.82
RUD3	YOR216C	ATP23	P53722	227 aa		3.66	□□□□□ -1.82
RUD3	YOR216C	ISA1	Q07821	250 aa	Predicted RBP	3.66	□□□□□ -1.82
RUD3	YOR216C	IZH3	Q07959	543 aa		3.66	□□□□□ -1.82
RUD3	YOR216C	YPT7	P32939	208 aa		3.65	□□□□□ -1.83
RUD3	YOR216C	SPC97	P38863	823 aa		3.65	□□□□□ -1.83
RUD3	YOR216C	TUP1	P16649	713 aa		3.64	□□□□□ -1.83
RUD3	YOR216C	HOG1	P32485	435 aa		3.64	□□□□□ -1.83
RUD3	YOR216C	ERR1	P0CX10	437 aa		3.63	□□□□□ -1.83
RUD3	YOR216C	ERR2	P0CX11	437 aa		3.63	□□□□□ -1.83
RUD3	YOR216C	MNN4	P36044	1178 aa		3.63	□□□□□ -1.83
RUD3	YOR216C	AKL1	P38080	1108 aa	Known RBP	3.63	□□□□□ -1.83
RUD3	YOR216C	NMD5	P46970	1048 aa		3.63	□□□□□ -1.83
RUD3	YOR216C	TRS23	Q03784	219 aa		3.63	□□□□□ -1.83
RUD3	YOR216C	PRS5	Q12265	496 aa	Known RBP	3.63	□□□□□ -1.83
RUD3	YOR216C	MDM12	Q92328	271 aa		3.63	□□□□□ -1.83
RUD3	YOR216C	ERG20	P08524	352 aa	Known RBP	3.62	□□□□□ -1.83
RUD3	YOR216C	PMA2	P19657	947 aa		3.62	□□□□□ -1.83
RUD3	YOR216C	ASK1	P35734	292 aa		3.62	□□□□□ -1.83
RUD3	YOR216C	SSZ1	P38788	538 aa	Known RBP	3.62	□□□□□ -1.83
RUD3	YOR216C	PCI8	P40512	444 aa		3.62	□□□□□ -1.83
RUD3	YOR216C	CIT2	P08679	460 aa		3.61	□□□□□ -1.83
RUD3	YOR216C	BIT61	P47041	543 aa		3.61	□□□□□ -1.83
RUD3	YOR216C	SCW4	P53334	386 aa	Known RBP	3.61	□□□□□ -1.83
RUD3	YOR216C	DAK1	P54838	584 aa	Known RBP	3.61	□□□□□ -1.83
RUD3	YOR216C	AQY1	P0CD91	305 aa		3.6	□□□□□ -1.83
RUD3	YOR216C	SEC15	P22224	910 aa		3.6	□□□□□ -1.83
RUD3	YOR216C	TSR4	P25040	408 aa		3.6	□□□□□ -1.83
RUD3	YOR216C	YHR202W	P38887	602 aa		3.6	□□□□□ -1.83
RUD3	YOR216C	MNT3	P40549	630 aa		3.6	□□□□□ -1.83
RUD3	YOR216C	YJR039W	P47107	1121 aa		3.6	□□□□□ -1.83
RUD3	YOR216C	ERG13	P54839	491 aa	Known RBP	3.6	□□□□□ -1.83
RUD3	YOR216C	RSC9	Q03124	581 aa		3.6	□□□□□ -1.83
RUD3	YOR216C	RPL7A	P05737	244 aa	Known RBP	3.59	□□□□□ -1.84
RUD3	YOR216C	MEF1	P25039	761 aa		3.59	□□□□□ -1.84
RUD3	YOR216C	KIN82	P25341	720 aa		3.59	□□□□□ -1.84
RUD3	YOR216C	RIM4	P38741	713 aa		3.59	□□□□□ -1.84
RUD3	YOR216C	VHS3	Q08438	674 aa		3.59	□□□□□ -1.84
RUD3	YOR216C	RPL7B	Q12213	244 aa	Known RBP	3.59	□□□□□ -1.84
RUD3	YOR216C	ZPS1	Q12512	249 aa		3.59	□□□□□ -1.84
RUD3	YOR216C	SRD1	P09007	221 aa		3.58	□□□□□ -1.84
RUD3	YOR216C	HEM1	P09950	548 aa	Predicted RBP	3.58	□□□□□ -1.84
RUD3	YOR216C	FRS1	P15624	595 aa	Known RBP	3.58	□□□□□ -1.84
RUD3	YOR216C	MRPL9	P31334	269 aa		3.58	□□□□□ -1.84
RUD3	YOR216C	NUG1	P40010	520 aa	Known RBP	3.58	□□□□□ -1.84
RUD3	YOR216C	MAF1	P41910	395 aa		3.58	□□□□□ -1.84
RUD3	YOR216C	LSC1	P53598	329 aa	Known RBP	3.58	□□□□□ -1.84
RUD3	YOR216C	NUP53	Q03790	475 aa		3.58	□□□□□ -1.84
RUD3	YOR216C	CDC53	Q12018	815 aa	Known RBP	3.58	□□□□□ -1.84
RUD3	YOR216C	DCS2	Q12123	353 aa		3.58	□□□□□ -1.84
RUD3	YOR216C	GSY1	P23337	708 aa		3.57	□□□□□ -1.84
RUD3	YOR216C	PET127	P32606	800 aa		3.57	□□□□□ -1.84
RUD3	YOR216C	DSS1	P39112	969 aa		3.57	□□□□□ -1.84
RUD3	YOR216C	SNO3	P43544	222 aa		3.57	□□□□□ -1.84
RUD3	YOR216C	NSE3	Q05541	303 aa		3.57	□□□□□ -1.84
RUD3	YOR216C	CPA2	P03965	1118 aa	Known RBP	3.56	□□□□□ -1.84
RUD3	YOR216C	RPS9B	P05755	195 aa	Known RBP	3.56	□□□□□ -1.84
RUD3	YOR216C	CHZ1	P40019	153 aa	Predicted RBP	3.56	□□□□□ -1.84
RUD3	YOR216C	DOT6	P40059	670 aa	Known RBP	3.56	□□□□□ -1.84
RUD3	YOR216C	BST1	P43571	1029 aa		3.56	□□□□□ -1.84
RUD3	YOR216C	AIM14	P53109	570 aa		3.56	□□□□□ -1.84
RUD3	YOR216C	HMG1	P12683	1054 aa		3.55	□□□□□ -1.84
RUD3	YOR216C	STI1	P15705	589 aa	Known RBP RIP-Chip data	3.55	□□□□□ -1.84	not detected
RUD3	YOR216C	RPC34	P32910	317 aa		3.55	□□□□□ -1.84
RUD3	YOR216C	GCS1	P35197	352 aa		3.55	□□□□□ -1.84
RUD3	YOR216C	PIH1	P38768	344 aa		3.55	□□□□□ -1.84
RUD3	YOR216C	THI6	P41835	540 aa		3.55	□□□□□ -1.84
RUD3	YOR216C	ATG36	P46983	293 aa		3.55	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 80.1 ms