RNA–Protein interactions for RNA: YOR159C

SME1, Transcript of Core Sm protein Sm E, yeast

Gene SME1, Length 285 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SME1	YOR159C	GUD1	Q07729	489 aa		4.65	□□□□□ -1.67
SME1	YOR159C	YLR001C	Q07895	862 aa		4.65	□□□□□ -1.67
SME1	YOR159C	RSC8	P43609	557 aa	Known RBP	4.64	□□□□□ -1.67
SME1	YOR159C	COQ11	Q05892	277 aa		4.64	□□□□□ -1.67
SME1	YOR159C	ADR1	P07248	1323 aa		4.64	□□□□□ -1.67
SME1	YOR159C	ILV6	P25605	309 aa	Known RBP	4.63	□□□□□ -1.67
SME1	YOR159C	FUB1	P25659	250 aa		4.63	□□□□□ -1.67
SME1	YOR159C	CCR4	P31384	837 aa	Known RBP	4.63	□□□□□ -1.67
SME1	YOR159C	APN2	P38207	520 aa		4.63	□□□□□ -1.67
SME1	YOR159C	YHR097C	P38809	366 aa	Known RBP	4.63	□□□□□ -1.67
SME1	YOR159C	SET2	P46995	733 aa	Known RBP	4.63	□□□□□ -1.67
SME1	YOR159C	HLJ1	P48353	224 aa		4.63	□□□□□ -1.67
SME1	YOR159C	DNM1	P54861	757 aa		4.63	□□□□□ -1.67
SME1	YOR159C	GPD1	Q00055	391 aa	Known RBP	4.63	□□□□□ -1.67
SME1	YOR159C	YNL162W-A	Q3E7A8	72 aa		4.63	□□□□□ -1.67
SME1	YOR159C	BFA1	P47113	574 aa		4.62	□□□□□ -1.67
SME1	YOR159C	YGR151C	P53287	111 aa		4.62	□□□□□ -1.67
SME1	YOR159C	VPS36	Q06696	566 aa		4.62	□□□□□ -1.67
SME1	YOR159C	ISA1	Q07821	250 aa	Predicted RBP	4.62	□□□□□ -1.67
SME1	YOR159C	YKR075C	P36155	307 aa		4.61	□□□□□ -1.67
SME1	YOR159C	BIT2	P38346	545 aa		4.61	□□□□□ -1.67
SME1	YOR159C	SSZ1	P38788	538 aa	Known RBP	4.61	□□□□□ -1.67
SME1	YOR159C	FPR3	P38911	411 aa	Known RBP	4.61	□□□□□ -1.67
SME1	YOR159C	MGS1	P40151	587 aa		4.61	□□□□□ -1.67
SME1	YOR159C	RFX1	P48743	811 aa		4.61	□□□□□ -1.67
SME1	YOR159C	DCS2	Q12123	353 aa		4.61	□□□□□ -1.67
SME1	YOR159C	YGR161W-C	Q3E744	92 aa		4.61	□□□□□ -1.67
SME1	YOR159C	SEC6	P32844	805 aa		4.6	□□□□□ -1.67
SME1	YOR159C	GMH1	P36125	273 aa		4.6	□□□□□ -1.67
SME1	YOR159C	AKL1	P38080	1108 aa	Known RBP	4.6	□□□□□ -1.67
SME1	YOR159C	KSP1	P38691	1029 aa	Known RBP	4.6	□□□□□ -1.67
SME1	YOR159C	NUG1	P40010	520 aa	Known RBP	4.6	□□□□□ -1.67
SME1	YOR159C	MRI1	Q06489	411 aa	Known RBP	4.6	□□□□□ -1.67
SME1	YOR159C	DIA2	Q08496	732 aa	Predicted RBP	4.6	□□□□□ -1.67
SME1	YOR159C	CHS5	Q12114	671 aa	Known RBP	4.6	□□□□□ -1.67
SME1	YOR159C	RPN13	O13563	156 aa		4.59	□□□□□ -1.67
SME1	YOR159C	STE12	P13574	688 aa		4.59	□□□□□ -1.67
SME1	YOR159C	FEN2	P25621	512 aa	Known RBP	4.59	□□□□□ -1.67
SME1	YOR159C	MAL31	P38156	614 aa		4.59	□□□□□ -1.67
SME1	YOR159C	MUP3	P38734	546 aa		4.59	□□□□□ -1.67
SME1	YOR159C	YHR202W	P38887	602 aa		4.59	□□□□□ -1.67
SME1	YOR159C	MIT1	P40002	666 aa		4.59	□□□□□ -1.67
SME1	YOR159C	PIG2	P40187	538 aa		4.59	□□□□□ -1.67
SME1	YOR159C	YIL077C	P40508	320 aa		4.59	□□□□□ -1.67
SME1	YOR159C	MPS3	P47069	682 aa		4.59	□□□□□ -1.67
SME1	YOR159C	YJR039W	P47107	1121 aa		4.59	□□□□□ -1.67
SME1	YOR159C	NMA2	P53204	395 aa		4.59	□□□□□ -1.67
SME1	YOR159C	CLF1	Q12309	687 aa	Predicted RBP	4.59	□□□□□ -1.67
SME1	YOR159C	PDR15	Q04182	1529 aa	Known RBP	4.58	□□□□□ -1.68
SME1	YOR159C	DRS2	P39524	1355 aa		4.58	□□□□□ -1.68
SME1	YOR159C	TDA3	P38758	523 aa		4.58	□□□□□ -1.68
SME1	YOR159C	CKB2	P38930	258 aa		4.58	□□□□□ -1.68
SME1	YOR159C	SNM1	P40993	198 aa		4.58	□□□□□ -1.68
SME1	YOR159C	SPC98	P53540	846 aa		4.58	□□□□□ -1.68
SME1	YOR159C	YDL086W	Q07505	273 aa		4.58	□□□□□ -1.68
SME1	YOR159C	YRF1-1	P0CX20	1796 aa		4.58	□□□□□ -1.68
SME1	YOR159C	YRF1-5	P0CX21	1796 aa		4.58	□□□□□ -1.68
SME1	YOR159C	YRF1-8	P0CX22	1796 aa		4.58	□□□□□ -1.68
SME1	YOR159C	SGS1	P35187	1447 aa		4.57	□□□□□ -1.68
SME1	YOR159C	LAM4	P38800	1345 aa		4.57	□□□□□ -1.68
SME1	YOR159C	PRP28	P23394	588 aa		4.57	□□□□□ -1.68
SME1	YOR159C	KCC4	P25389	1037 aa		4.57	□□□□□ -1.68
SME1	YOR159C	PRP19	P32523	503 aa	Known RBP	4.57	□□□□□ -1.68
SME1	YOR159C	PAC2	P39937	518 aa		4.57	□□□□□ -1.68
SME1	YOR159C	YJR142W	P47173	342 aa		4.57	□□□□□ -1.68
SME1	YOR159C	THI73	Q07904	523 aa		4.57	□□□□□ -1.68
SME1	YOR159C	TY1B-BR	Q12193	1756 aa		4.56	□□□□□ -1.68
SME1	YOR159C	TY1B-GR3	Q12316	1755 aa		4.56	□□□□□ -1.68
SME1	YOR159C	TY1B-OR	Q92393	1755 aa		4.56	□□□□□ -1.68
SME1	YOR159C	NUP145	P49687	1317 aa		4.56	□□□□□ -1.68
SME1	YOR159C	PHO5	P00635	467 aa		4.56	□□□□□ -1.68
SME1	YOR159C	ERG20	P08524	352 aa	Known RBP	4.56	□□□□□ -1.68
SME1	YOR159C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	not detected
SME1	YOR159C	TYS1	P36421	394 aa	Known RBP	4.56	□□□□□ -1.68
SME1	YOR159C	YMC2	P38087	329 aa		4.56	□□□□□ -1.68
SME1	YOR159C	RET2	P43621	546 aa		4.56	□□□□□ -1.68
SME1	YOR159C	YJR096W	P47137	282 aa		4.56	□□□□□ -1.68
SME1	YOR159C	PMT3	P47190	753 aa		4.56	□□□□□ -1.68
SME1	YOR159C	RCR2	Q03446	210 aa	Known RBP	4.56	□□□□□ -1.68
SME1	YOR159C	OSW1	Q08692	278 aa		4.56	□□□□□ -1.68
SME1	YOR159C	AFT2	Q08957	416 aa		4.56	□□□□□ -1.68
SME1	YOR159C	AIM44	Q99299	758 aa		4.56	□□□□□ -1.68
SME1	YOR159C	HOM2	P13663	365 aa	Known RBP	4.55	□□□□□ -1.68
SME1	YOR159C	SEC15	P22224	910 aa		4.55	□□□□□ -1.68
SME1	YOR159C	VPS34	P22543	875 aa		4.55	□□□□□ -1.68
SME1	YOR159C	IMG2	P25642	146 aa	Predicted RBP	4.55	□□□□□ -1.68
SME1	YOR159C	MSS1	P32559	526 aa	Predicted RBP	4.55	□□□□□ -1.68
SME1	YOR159C	KHA1	P40309	873 aa		4.55	□□□□□ -1.68
SME1	YOR159C	YGR153W	P48238	217 aa		4.55	□□□□□ -1.68
SME1	YOR159C	UME1	Q03010	460 aa		4.55	□□□□□ -1.68
SME1	YOR159C	YMR210W	Q03649	449 aa		4.55	□□□□□ -1.68
SME1	YOR159C	HOF1	Q05080	669 aa		4.55	□□□□□ -1.68
SME1	YOR159C	VHS3	Q08438	674 aa		4.55	□□□□□ -1.68
SME1	YOR159C	POM34	Q12445	299 aa		4.55	□□□□□ -1.68
SME1	YOR159C	ABF1	P14164	731 aa		4.54	□□□□□ -1.68
SME1	YOR159C	ORC2	P32833	620 aa		4.54	□□□□□ -1.68
SME1	YOR159C	YPT7	P32939	208 aa		4.54	□□□□□ -1.68
SME1	YOR159C	CTP1	P38152	299 aa		4.54	□□□□□ -1.68
SME1	YOR159C	COS111	P38308	924 aa		4.54	□□□□□ -1.68
SME1	YOR159C	BIT61	P47041	543 aa		4.54	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 84.1 ms