RNA–Protein interactions for RNA: YOR098C

NUP1, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP1, Length 3,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP1YOR098C SAP30P38429 201 aa5.86□□□□□ -1.47
NUP1YOR098C YLF2P38746 405 aa5.86□□□□□ -1.47
NUP1YOR098C SPP1Q03012 353 aa5.86□□□□□ -1.47
NUP1YOR098C YIG1Q08956 461 aa5.86□□□□□ -1.47
NUP1YOR098C PAR32Q12515 295 aaKnown RBP5.86□□□□□ -1.47
NUP1YOR098C Q0142Q9ZZW4 58 aa5.86□□□□□ -1.47
NUP1YOR098C YBT1P32386 1661 aa5.86□□□□□ -1.47
NUP1YOR098C CDC26P14724 124 aa5.86□□□□□ -1.47
NUP1YOR098C MCM3P24279 971 aaKnown RBP5.86□□□□□ -1.47
NUP1YOR098C DAL1P32375 460 aa5.86□□□□□ -1.47
NUP1YOR098C ESL2P36168 1195 aa5.86□□□□□ -1.47
NUP1YOR098C ATG14P38270 344 aa5.86□□□□□ -1.47
NUP1YOR098C STL1P39932 569 aa5.86□□□□□ -1.47
NUP1YOR098C POL31P46957 487 aa5.86□□□□□ -1.47
NUP1YOR098C NGL1Q08213 363 aaKnown RBP5.86□□□□□ -1.47
NUP1YOR098C PSF3Q12146 194 aa5.86□□□□□ -1.47
NUP1YOR098C NFI1Q12216 726 aa5.86□□□□□ -1.47
NUP1YOR098C GCN2P15442 1659 aa5.86□□□□□ -1.47
NUP1YOR098C TY1B-BRQ12193 1756 aa5.86□□□□□ -1.47
NUP1YOR098C TY1B-GR3Q12316 1755 aa5.86□□□□□ -1.47
NUP1YOR098C TY1B-ORQ92393 1755 aa5.86□□□□□ -1.47
NUP1YOR098C ROX1P25042 368 aa5.86□□□□□ -1.47
NUP1YOR098C KNS1P32350 737 aaPredicted RBP5.86□□□□□ -1.47
NUP1YOR098C NPP2P39997 493 aa5.86□□□□□ -1.47
NUP1YOR098C VID28P40547 921 aa5.86□□□□□ -1.47
NUP1YOR098C IRC5P43610 853 aa5.86□□□□□ -1.47
NUP1YOR098C YJL055WP47044 245 aa5.86□□□□□ -1.47
NUP1YOR098C MTD1Q02046 320 aaKnown RBP5.86□□□□□ -1.47
NUP1YOR098C RSC2Q06488 889 aa5.86□□□□□ -1.47
NUP1YOR098C CSR1Q06705 408 aaKnown RBP5.86□□□□□ -1.47
NUP1YOR098C PHO5P00635 467 aa5.85□□□□□ -1.47
NUP1YOR098C VMA2P16140 517 aaKnown RBP5.85□□□□□ -1.47
NUP1YOR098C CLB4P24871 460 aa5.85□□□□□ -1.47
NUP1YOR098C SEC21P32074 935 aaKnown RBP5.85□□□□□ -1.47
NUP1YOR098C PRO1P32264 428 aa5.85□□□□□ -1.47
NUP1YOR098C MDL1P33310 695 aa5.85□□□□□ -1.47
NUP1YOR098C STT3P39007 718 aaKnown RBP5.85□□□□□ -1.47
NUP1YOR098C NCR1Q12200 1170 aa5.85□□□□□ -1.47
NUP1YOR098C ISA2Q12425 185 aa5.85□□□□□ -1.47
NUP1YOR098C NFS1P25374 497 aa5.85□□□□□ -1.47
NUP1YOR098C SLA2P33338 968 aa5.85□□□□□ -1.47
NUP1YOR098C RTN2Q12443 393 aa5.85□□□□□ -1.47
NUP1YOR098C CPA2P03965 1118 aaKnown RBP5.84□□□□□ -1.47
NUP1YOR098C SWI6P09959 803 aa5.84□□□□□ -1.47
NUP1YOR098C GPI10P30777 616 aa5.84□□□□□ -1.47
NUP1YOR098C DJP1P40564 432 aa5.84□□□□□ -1.47
NUP1YOR098C RLP7P40693 322 aaKnown RBP5.84□□□□□ -1.47
NUP1YOR098C RMT2Q03305 412 aa5.84□□□□□ -1.47
NUP1YOR098C HAS1Q03532 505 aaKnown RBP5.84□□□□□ -1.47
NUP1YOR098C PDS5Q04264 1277 aa5.84□□□□□ -1.47
NUP1YOR098C YBR182C-AQ8TGU6 64 aa5.84□□□□□ -1.47
NUP1YOR098C KHA1P40309 873 aa5.84□□□□□ -1.47
NUP1YOR098C FCP1Q03254 732 aa5.84□□□□□ -1.47
NUP1YOR098C SOG2Q08817 791 aa5.84□□□□□ -1.47
NUP1YOR098C SFI1Q12369 946 aa5.84□□□□□ -1.47
NUP1YOR098C SDH2P21801 266 aa5.84□□□□□ -1.48
NUP1YOR098C SEC5P89102 971 aa5.84□□□□□ -1.48
NUP1YOR098C SRC1Q03707 834 aa5.84□□□□□ -1.48
NUP1YOR098C RRP36Q12481 300 aaPredicted RBP5.84□□□□□ -1.48
NUP1YOR098C SRO9P25567 434 aaKnown RBP5.83□□□□□ -1.48
NUP1YOR098C ARL1P38116 183 aaKnown RBP5.83□□□□□ -1.48
NUP1YOR098C VPS41P38959 992 aa5.83□□□□□ -1.48
NUP1YOR098C UBP7P40453 1071 aa5.83□□□□□ -1.48
NUP1YOR098C SEC28P40509 296 aaKnown RBP5.83□□□□□ -1.48
NUP1YOR098C LCB2P40970 561 aa5.83□□□□□ -1.48
NUP1YOR098C ARF3P40994 183 aaRIP-Chip data5.83□□□□□ -1.48not detected
NUP1YOR098C GYP7P48365 746 aa5.83□□□□□ -1.48
NUP1YOR098C YPL260WQ08977 551 aa5.83□□□□□ -1.48
NUP1YOR098C MRP10O75012 95 aa5.83□□□□□ -1.48
NUP1YOR098C QCR6P00127 147 aa5.83□□□□□ -1.48
NUP1YOR098C RPC40P07703 335 aaKnown RBP5.83□□□□□ -1.48
NUP1YOR098C CDC4P07834 779 aa5.83□□□□□ -1.48
NUP1YOR098C REC107P21651 314 aa5.83□□□□□ -1.48
NUP1YOR098C POL4P25615 582 aa5.83□□□□□ -1.48
NUP1YOR098C LAP3Q01532 483 aaKnown RBP RIP-Chip data5.83□□□□□ -1.48not detected
NUP1YOR098C PEX25Q02969 394 aa5.83□□□□□ -1.48
NUP1YOR098C RPN7Q06103 429 aaKnown RBP5.83□□□□□ -1.48
NUP1YOR098C RTK1Q12100 620 aaPredicted RBP5.83□□□□□ -1.48
NUP1YOR098C VAS1P07806 1104 aaKnown RBP5.82□□□□□ -1.48
NUP1YOR098C THR1P17423 357 aaKnown RBP5.82□□□□□ -1.48
NUP1YOR098C SRP68P38687 599 aaKnown RBP5.82□□□□□ -1.48
NUP1YOR098C UME6P39001 836 aa5.82□□□□□ -1.48
NUP1YOR098C PSP2P50109 593 aaKnown RBP5.82□□□□□ -1.48
NUP1YOR098C YKE2P52553 114 aa5.82□□□□□ -1.48
NUP1YOR098C YNR061CP53747 219 aa5.82□□□□□ -1.48
NUP1YOR098C CRR1Q05790 422 aa5.82□□□□□ -1.48
NUP1YOR098C KEL3Q08979 651 aaPredicted RBP5.82□□□□□ -1.48
NUP1YOR098C POL3P15436 1097 aa5.82□□□□□ -1.48
NUP1YOR098C BET2P20133 325 aa5.82□□□□□ -1.48
NUP1YOR098C SWI4P25302 1093 aaKnown RBP5.82□□□□□ -1.48
NUP1YOR098C RRP7P25368 297 aaPredicted RBP5.82□□□□□ -1.48
NUP1YOR098C FTH1P38310 465 aa5.82□□□□□ -1.48
NUP1YOR098C GPB2P39717 880 aa5.82□□□□□ -1.48
NUP1YOR098C YFL054CP43549 646 aa5.82□□□□□ -1.48
NUP1YOR098C YOR059CQ08448 450 aaKnown RBP5.82□□□□□ -1.48
NUP1YOR098C NOP58Q12499 511 aaKnown RBP5.82□□□□□ -1.48
NUP1YOR098C MMS1Q06211 1407 aa5.82□□□□□ -1.48
NUP1YOR098C TY1B-HO13535 1793 aa5.82□□□□□ -1.48
NUP1YOR098C TY1B-DR5P0C2I2 1755 aa5.82□□□□□ -1.48
NUP1YOR098C TY1B-DR6P0C2I3 1755 aa5.82□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 32 ms