RNA–Protein interactions for RNA: YOR078W

BUD21, Transcript of Component of small ribosomal subunit (SSU) processosome, yeastyeast

Gene BUD21, Length 645 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BUD21YOR078W DIP5P53388 608 aa4.14□□□□□ -1.75
BUD21YOR078W SNP1Q00916 300 aaPredicted RBP4.14□□□□□ -1.75
BUD21YOR078W FRE7Q12333 620 aa4.14□□□□□ -1.75
BUD21YOR078W AAD3P25612 363 aa4.13□□□□□ -1.75
BUD21YOR078W STO1P34160 861 aaKnown RBP4.13□□□□□ -1.75
BUD21YOR078W YEL1P34225 687 aa4.13□□□□□ -1.75
BUD21YOR078W YIL077CP40508 320 aa4.12□□□□□ -1.75
BUD21YOR078W CAF16P43569 289 aa4.12□□□□□ -1.75
BUD21YOR078W YGL117WP53133 265 aa4.12□□□□□ -1.75
BUD21YOR078W LEU2P04173 364 aaPredicted RBP4.11□□□□□ -1.75
BUD21YOR078W CDC9P04819 755 aa4.11□□□□□ -1.75
BUD21YOR078W VBA3P25594 458 aa4.11□□□□□ -1.75
BUD21YOR078W SET2P46995 733 aaKnown RBP4.11□□□□□ -1.75
BUD21YOR078W IRC8P47046 822 aa4.11□□□□□ -1.75
BUD21YOR078W BRE5P53741 515 aaKnown RBP4.11□□□□□ -1.75
BUD21YOR078W APN2P38207 520 aa4.1□□□□□ -1.75
BUD21YOR078W HSL7P38274 827 aa4.1□□□□□ -1.75
BUD21YOR078W YJL049WP47048 450 aa4.1□□□□□ -1.75
BUD21YOR078W NGL2Q03264 515 aaKnown RBP4.1□□□□□ -1.75
BUD21YOR078W UFO1Q04511 668 aa4.1□□□□□ -1.75
BUD21YOR078W NHX1Q04121 633 aa4.09□□□□□ -1.75
BUD21YOR078W ORM2Q06144 216 aa4.09□□□□□ -1.75
BUD21YOR078W YFT2Q06676 274 aa4.09□□□□□ -1.75
BUD21YOR078W VPS36Q06696 566 aa4.09□□□□□ -1.75
BUD21YOR078W POM34Q12445 299 aa4.09□□□□□ -1.75
BUD21YOR078W SKI3P17883 1432 aaKnown RBP4.09□□□□□ -1.75
BUD21YOR078W ELF1P36053 145 aa4.08□□□□□ -1.76
BUD21YOR078W COS111P38308 924 aa4.08□□□□□ -1.76
BUD21YOR078W CPR8P53728 308 aa4.08□□□□□ -1.76
BUD21YOR078W SPA2P23201 1466 aaKnown RBP4.07□□□□□ -1.76
BUD21YOR078W ERR1P0CX10 437 aa4.07□□□□□ -1.76
BUD21YOR078W ERR2P0CX11 437 aa4.07□□□□□ -1.76
BUD21YOR078W NTH1P32356 751 aa4.07□□□□□ -1.76
BUD21YOR078W BEM3P32873 1128 aa4.07□□□□□ -1.76
BUD21YOR078W YPT7P32939 208 aa4.07□□□□□ -1.76
BUD21YOR078W ISA1Q07821 250 aaPredicted RBP4.07□□□□□ -1.76
BUD21YOR078W IZH3Q07959 543 aa4.07□□□□□ -1.76
BUD21YOR078W HOG1P32485 435 aa4.06□□□□□ -1.76
BUD21YOR078W MNN4P36044 1178 aa4.06□□□□□ -1.76
BUD21YOR078W ATP23P53722 227 aa4.06□□□□□ -1.76
BUD21YOR078W MDM12Q92328 271 aa4.06□□□□□ -1.76
BUD21YOR078W AKL1P38080 1108 aaKnown RBP4.05□□□□□ -1.76
BUD21YOR078W SSZ1P38788 538 aaKnown RBP4.05□□□□□ -1.76
BUD21YOR078W PMA2P19657 947 aa4.04□□□□□ -1.76
BUD21YOR078W BIT61P47041 543 aa4.04□□□□□ -1.76
BUD21YOR078W TRS23Q03784 219 aa4.04□□□□□ -1.76
BUD21YOR078W IRC3Q06683 689 aa4.04□□□□□ -1.76
BUD21YOR078W PRS5Q12265 496 aaKnown RBP4.04□□□□□ -1.76
BUD21YOR078W ERG20P08524 352 aaKnown RBP4.03□□□□□ -1.76
BUD21YOR078W CIT2P08679 460 aa4.03□□□□□ -1.76
BUD21YOR078W TUP1P16649 713 aa4.03□□□□□ -1.76
BUD21YOR078W MEF1P25039 761 aa4.03□□□□□ -1.76
BUD21YOR078W YHR202WP38887 602 aa4.02□□□□□ -1.77
BUD21YOR078W NMD5P46970 1048 aa4.02□□□□□ -1.77
BUD21YOR078W YJR039WP47107 1121 aa4.02□□□□□ -1.77
BUD21YOR078W SRD1P09007 221 aa4.01□□□□□ -1.77
BUD21YOR078W EUG1P32474 517 aa4.01□□□□□ -1.77
BUD21YOR078W SCW4P53334 386 aaKnown RBP4.01□□□□□ -1.77
BUD21YOR078W RSC9Q03124 581 aa4.01□□□□□ -1.77
BUD21YOR078W CDC53Q12018 815 aaKnown RBP4.01□□□□□ -1.77
BUD21YOR078W DCS2Q12123 353 aa4.01□□□□□ -1.77
BUD21YOR078W RPL7AP05737 244 aaKnown RBP4□□□□□ -1.77
BUD21YOR078W AQY1P0CD91 305 aa4□□□□□ -1.77
BUD21YOR078W SEC15P22224 910 aa4□□□□□ -1.77
BUD21YOR078W KIN82P25341 720 aa4□□□□□ -1.77
BUD21YOR078W RIM4P38741 713 aa4□□□□□ -1.77
BUD21YOR078W NUG1P40010 520 aaKnown RBP4□□□□□ -1.77
BUD21YOR078W GIS2P53849 153 aaKnown RBP RIP-Chip data4□□□□□ -1.77 RIP-Chip
BUD21YOR078W DAK1P54838 584 aaKnown RBP4□□□□□ -1.77
BUD21YOR078W ERG13P54839 491 aaKnown RBP4□□□□□ -1.77
BUD21YOR078W RPL7BQ12213 244 aaKnown RBP4□□□□□ -1.77
BUD21YOR078W FRS1P15624 595 aaKnown RBP3.99□□□□□ -1.77
BUD21YOR078W PXL1P36166 706 aa3.99□□□□□ -1.77
BUD21YOR078W DSS1P39112 969 aa3.99□□□□□ -1.77
BUD21YOR078W NSE3Q05541 303 aa3.99□□□□□ -1.77
BUD21YOR078W VHS3Q08438 674 aa3.99□□□□□ -1.77
BUD21YOR078W ZPS1Q12512 249 aa3.99□□□□□ -1.77
BUD21YOR078W RPS9BP05755 195 aaKnown RBP3.98□□□□□ -1.77
BUD21YOR078W HMG1P12683 1054 aa3.98□□□□□ -1.77
BUD21YOR078W GSY1P23337 708 aa3.98□□□□□ -1.77
BUD21YOR078W PCI8P40512 444 aa3.98□□□□□ -1.77
BUD21YOR078W RCR2Q03446 210 aaKnown RBP3.98□□□□□ -1.77
BUD21YOR078W HEM1P09950 548 aaPredicted RBP3.97□□□□□ -1.77
BUD21YOR078W MRPL9P31334 269 aa3.97□□□□□ -1.77
BUD21YOR078W PET127P32606 800 aa3.97□□□□□ -1.77
BUD21YOR078W ASK1P35734 292 aa3.97□□□□□ -1.77
BUD21YOR078W CHZ1P40019 153 aaPredicted RBP3.97□□□□□ -1.77
BUD21YOR078W DOT6P40059 670 aaKnown RBP3.97□□□□□ -1.77
BUD21YOR078W SNO3P43544 222 aa3.97□□□□□ -1.77
BUD21YOR078W BST1P43571 1029 aa3.97□□□□□ -1.77
BUD21YOR078W AIM14P53109 570 aa3.97□□□□□ -1.77
BUD21YOR078W ATG33Q06485 197 aa3.97□□□□□ -1.77
BUD21YOR078W CPA2P03965 1118 aaKnown RBP3.96□□□□□ -1.78
BUD21YOR078W STI1P15705 589 aaKnown RBP RIP-Chip data3.96□□□□□ -1.78not detected
BUD21YOR078W IMG2P25642 146 aaPredicted RBP3.96□□□□□ -1.78
BUD21YOR078W MNT3P40549 630 aa3.96□□□□□ -1.78
BUD21YOR078W NEW1Q08972 1196 aaKnown RBP3.96□□□□□ -1.78
BUD21YOR078W RPC34P32910 317 aa3.95□□□□□ -1.78
BUD21YOR078W PIH1P38768 344 aa3.95□□□□□ -1.78
BUD21YOR078W SPC97P38863 823 aa3.95□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 84.7 ms