RNA–Protein interactions for RNA: YOL047C

LDS2, Transcript of Protein Involved in spore wall assembly, yeast

Gene LDS2, Length 1,071 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LDS2	YOL047C	DPH1	P40487	425 aa	Known RBP	3.9	□□□□□ -1.79
LDS2	YOL047C	VHR1	P40522	640 aa		3.9	□□□□□ -1.79
LDS2	YOL047C	YFL066C	P43538	392 aa		3.9	□□□□□ -1.79
LDS2	YOL047C	RBG2	P53295	368 aa	Known RBP	3.9	□□□□□ -1.79
LDS2	YOL047C	YGR283C	P53336	341 aa	Predicted RBP	3.9	□□□□□ -1.79
LDS2	YOL047C	VTC3	Q02725	835 aa		3.9	□□□□□ -1.79
LDS2	YOL047C	SKY1	Q03656	742 aa		3.9	□□□□□ -1.79
LDS2	YOL047C	INP2	Q03824	705 aa		3.9	□□□□□ -1.79
LDS2	YOL047C	UTP5	Q04177	643 aa	Known RBP	3.9	□□□□□ -1.79
LDS2	YOL047C	TDA9	Q04545	1251 aa		3.9	□□□□□ -1.79
LDS2	YOL047C	PEX15	Q08215	383 aa		3.9	□□□□□ -1.79
LDS2	YOL047C	MCH5	Q08777	521 aa		3.9	□□□□□ -1.79
LDS2	YOL047C	NTE1	Q04958	1679 aa		3.9	□□□□□ -1.79
LDS2	YOL047C	SWI1	P09547	1314 aa		3.9	□□□□□ -1.79
LDS2	YOL047C	PRP16	P15938	1071 aa	Predicted RBP	3.89	□□□□□ -1.79
LDS2	YOL047C	RER1	P25560	188 aa		3.89	□□□□□ -1.79
LDS2	YOL047C	FUN30	P31380	1131 aa		3.89	□□□□□ -1.79
LDS2	YOL047C	RPC82	P32349	654 aa		3.89	□□□□□ -1.79
LDS2	YOL047C	PRX1	P34227	261 aa	Known RBP	3.89	□□□□□ -1.79
LDS2	YOL047C	TFA2	P36145	328 aa		3.89	□□□□□ -1.79
LDS2	YOL047C	HXT6	P39003	570 aa	Known RBP	3.89	□□□□□ -1.79
LDS2	YOL047C	HXT7	P39004	570 aa		3.89	□□□□□ -1.79
LDS2	YOL047C	YMR124W	P39523	943 aa	Known RBP	3.89	□□□□□ -1.79
LDS2	YOL047C	LSB6	P42951	607 aa		3.89	□□□□□ -1.79
LDS2	YOL047C	SPO74	P45819	413 aa		3.89	□□□□□ -1.79
LDS2	YOL047C	YJR124C	P47159	448 aa		3.89	□□□□□ -1.79
LDS2	YOL047C	SGM1	P47166	707 aa		3.89	□□□□□ -1.79
LDS2	YOL047C	HNT2	P49775	206 aa		3.89	□□□□□ -1.79
LDS2	YOL047C	ARC35	P53731	342 aa	Known RBP	3.89	□□□□□ -1.79
LDS2	YOL047C	TEP1	P53916	434 aa		3.89	□□□□□ -1.79
LDS2	YOL047C	UBX2	Q04228	584 aa		3.89	□□□□□ -1.79
LDS2	YOL047C	OPY2	Q06810	360 aa		3.89	□□□□□ -1.79
LDS2	YOL047C	ISA1	Q07821	250 aa	Predicted RBP	3.89	□□□□□ -1.79
LDS2	YOL047C	RSC58	Q07979	502 aa		3.89	□□□□□ -1.79
LDS2	YOL047C	DCS2	Q12123	353 aa		3.89	□□□□□ -1.79
LDS2	YOL047C	SLP1	Q12232	587 aa		3.89	□□□□□ -1.79
LDS2	YOL047C	YPR053C	Q6Q5F3	151 aa		3.89	□□□□□ -1.79
LDS2	YOL047C	BCK1	Q01389	1478 aa		3.89	□□□□□ -1.79
LDS2	YOL047C	ADE8	P04161	214 aa		3.88	□□□□□ -1.79
LDS2	YOL047C	VAS1	P07806	1104 aa	Known RBP	3.88	□□□□□ -1.79
LDS2	YOL047C	FUS1	P11710	512 aa		3.88	□□□□□ -1.79
LDS2	YOL047C	RPO26	P20435	155 aa		3.88	□□□□□ -1.79
LDS2	YOL047C	UBC1	P21734	215 aa	Known RBP	3.88	□□□□□ -1.79
LDS2	YOL047C	PGS1	P25578	521 aa		3.88	□□□□□ -1.79
LDS2	YOL047C	RPL5	P26321	297 aa	Known RBP	3.88	□□□□□ -1.79
LDS2	YOL047C	CDC60	P26637	1090 aa	Known RBP	3.88	□□□□□ -1.79
LDS2	YOL047C	GCD7	P32502	381 aa	Predicted RBP	3.88	□□□□□ -1.79
LDS2	YOL047C	PET309	P32522	965 aa	Predicted RBP	3.88	□□□□□ -1.79
LDS2	YOL047C	PAH1	P32567	862 aa		3.88	□□□□□ -1.79
LDS2	YOL047C	ORC2	P32833	620 aa		3.88	□□□□□ -1.79
LDS2	YOL047C	SLC1	P33333	303 aa		3.88	□□□□□ -1.79
LDS2	YOL047C	YEL1	P34225	687 aa		3.88	□□□□□ -1.79
LDS2	YOL047C	PXL1	P36166	706 aa		3.88	□□□□□ -1.79
LDS2	YOL047C	AHP1	P38013	176 aa	Known RBP	3.88	□□□□□ -1.79
LDS2	YOL047C	SPT8	P38915	602 aa		3.88	□□□□□ -1.79
LDS2	YOL047C	CCT4	P39078	528 aa	Known RBP	3.88	□□□□□ -1.79
LDS2	YOL047C	CAJ1	P39101	391 aa		3.88	□□□□□ -1.79
LDS2	YOL047C	SPC72	P39723	622 aa		3.88	□□□□□ -1.79
LDS2	YOL047C	EAF5	P39995	279 aa		3.88	□□□□□ -1.79
LDS2	YOL047C	MXR1	P40029	184 aa		3.88	□□□□□ -1.79
LDS2	YOL047C	TPA1	P40032	644 aa	Known RBP	3.88	□□□□□ -1.79
LDS2	YOL047C	RET2	P43621	546 aa		3.88	□□□□□ -1.79
LDS2	YOL047C	BNA2	P47125	453 aa		3.88	□□□□□ -1.79
LDS2	YOL047C	ENT3	P47160	408 aa		3.88	□□□□□ -1.79
LDS2	YOL047C	ASK10	P48361	1146 aa		3.88	□□□□□ -1.79
LDS2	YOL047C	GYP7	P48365	746 aa		3.88	□□□□□ -1.79
LDS2	YOL047C	ATP22	P50273	684 aa	Predicted RBP	3.88	□□□□□ -1.79
LDS2	YOL047C	YGL242C	P53066	181 aa		3.88	□□□□□ -1.79
LDS2	YOL047C	VID30	P53076	958 aa		3.88	□□□□□ -1.79
LDS2	YOL047C	SPO1	P53541	631 aa		3.88	□□□□□ -1.79
LDS2	YOL047C	CPR6	P53691	371 aa	Known RBP	3.88	□□□□□ -1.79
LDS2	YOL047C	MRPL19	P53875	158 aa		3.88	□□□□□ -1.79
LDS2	YOL047C	ALF1	P53904	254 aa		3.88	□□□□□ -1.79
LDS2	YOL047C	NCS2	P53923	493 aa	Predicted RBP	3.88	□□□□□ -1.79
LDS2	YOL047C	SPO19	Q03029	223 aa		3.88	□□□□□ -1.79
LDS2	YOL047C	RCF1	Q03713	159 aa		3.88	□□□□□ -1.79
LDS2	YOL047C	SYF1	Q04048	859 aa	Predicted RBP	3.88	□□□□□ -1.79
LDS2	YOL047C	VTI1	Q04338	217 aa		3.88	□□□□□ -1.79
LDS2	YOL047C	RBA50	Q04418	439 aa		3.88	□□□□□ -1.79
LDS2	YOL047C	YLR287C	Q05881	355 aa		3.88	□□□□□ -1.79
LDS2	YOL047C	STE23	Q06010	1027 aa		3.88	□□□□□ -1.79
LDS2	YOL047C	SGD1	Q06132	899 aa		3.88	□□□□□ -1.79
LDS2	YOL047C	YCG1	Q06680	1035 aa		3.88	□□□□□ -1.79
LDS2	YOL047C	BRE4	Q07660	1125 aa		3.88	□□□□□ -1.79
LDS2	YOL047C	CMS1	Q07897	291 aa	Known RBP	3.88	□□□□□ -1.79
LDS2	YOL047C	YOR389W	Q08912	624 aa		3.88	□□□□□ -1.79
LDS2	YOL047C	YPL150W	Q12152	901 aa		3.88	□□□□□ -1.79
LDS2	YOL047C	SMC6	Q12749	1114 aa		3.88	□□□□□ -1.79
LDS2	YOL047C	GPA1	P08539	472 aa		3.87	□□□□□ -1.79
LDS2	YOL047C	PMR1	P13586	950 aa		3.87	□□□□□ -1.79
LDS2	YOL047C	AAD3	P25612	363 aa		3.87	□□□□□ -1.79
LDS2	YOL047C	CCR4	P31384	837 aa	Known RBP	3.87	□□□□□ -1.79
LDS2	YOL047C	PDB1	P32473	366 aa	Known RBP	3.87	□□□□□ -1.79
LDS2	YOL047C	YME2	P32843	850 aa		3.87	□□□□□ -1.79
LDS2	YOL047C	REC104	P33323	182 aa		3.87	□□□□□ -1.79
LDS2	YOL047C	SEG2	P34250	1132 aa		3.87	□□□□□ -1.79
LDS2	YOL047C	PEX5	P35056	612 aa		3.87	□□□□□ -1.79
LDS2	YOL047C	MTH1	P35198	433 aa		3.87	□□□□□ -1.79
LDS2	YOL047C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	3.87	□□□□□ -1.79	not detected
LDS2	YOL047C	YKL050C	P35736	922 aa		3.87	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 58.9 ms