RNA–Protein interactions for RNA: YNR028W

CPR8, Transcript of Peptidyl-prolyl cis-trans isomerase (cyclophilin), yeastyeast

Gene CPR8, Length 927 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CPR8YNR028W NDC80P40460 691 aa5.18□□□□□ -1.58
CPR8YNR028W NOP15P53927 220 aaPredicted RBP5.18□□□□□ -1.58
CPR8YNR028W PTA1Q01329 785 aaPredicted RBP5.18□□□□□ -1.58
CPR8YNR028W RCR2Q03446 210 aaKnown RBP5.18□□□□□ -1.58
CPR8YNR028W YPS7Q06325 596 aa5.18□□□□□ -1.58
CPR8YNR028W HFI1Q12060 488 aa5.18□□□□□ -1.58
CPR8YNR028W RPS17AP02407 136 aaKnown RBP5.17□□□□□ -1.58
CPR8YNR028W RPS17BP14127 136 aaKnown RBP5.17□□□□□ -1.58
CPR8YNR028W THR1P17423 357 aaKnown RBP5.17□□□□□ -1.58
CPR8YNR028W FEN2P25621 512 aaKnown RBP5.17□□□□□ -1.58
CPR8YNR028W SEC6P32844 805 aa5.17□□□□□ -1.58
CPR8YNR028W OAF3P36023 863 aa5.17□□□□□ -1.58
CPR8YNR028W ARG2P40360 574 aa5.17□□□□□ -1.58
CPR8YNR028W CTR1P49573 406 aa5.17□□□□□ -1.58
CPR8YNR028W ATG4P53867 494 aa5.17□□□□□ -1.58
CPR8YNR028W CHS5Q12114 671 aaKnown RBP5.17□□□□□ -1.58
CPR8YNR028W USV1Q12132 391 aa5.17□□□□□ -1.58
CPR8YNR028W RPS21AP0C0V8 87 aaKnown RBP5.16□□□□□ -1.58
CPR8YNR028W GRX4P32642 244 aa5.16□□□□□ -1.58
CPR8YNR028W DUN1P39009 513 aa5.16□□□□□ -1.58
CPR8YNR028W YJL206CP39529 758 aa5.16□□□□□ -1.58
CPR8YNR028W YIL077CP40508 320 aa5.16□□□□□ -1.58
CPR8YNR028W QRI1P43123 477 aaKnown RBP5.16□□□□□ -1.58
CPR8YNR028W APM4Q99186 491 aa5.16□□□□□ -1.58
CPR8YNR028W GLN4P13188 809 aaKnown RBP5.15□□□□□ -1.59
CPR8YNR028W IME1P21190 360 aa5.15□□□□□ -1.59
CPR8YNR028W PRP22P24384 1145 aaKnown RBP5.15□□□□□ -1.59
CPR8YNR028W TSR4P25040 408 aa5.15□□□□□ -1.59
CPR8YNR028W GLG1P36143 616 aa5.15□□□□□ -1.59
CPR8YNR028W FAT1P38225 669 aa5.15□□□□□ -1.59
CPR8YNR028W COS111P38308 924 aa5.15□□□□□ -1.59
CPR8YNR028W PXA1P41909 870 aa5.15□□□□□ -1.59
CPR8YNR028W RFX1P48743 811 aa5.15□□□□□ -1.59
CPR8YNR028W STP4Q07351 490 aa5.15□□□□□ -1.59
CPR8YNR028W ABF1P14164 731 aa5.14□□□□□ -1.59
CPR8YNR028W BUD8P41698 603 aa5.14□□□□□ -1.59
CPR8YNR028W PPN1Q04119 674 aa5.14□□□□□ -1.59
CPR8YNR028W YFT2Q06676 274 aa5.14□□□□□ -1.59
CPR8YNR028W GFA1P14742 717 aaKnown RBP5.13□□□□□ -1.59
CPR8YNR028W DMC1P25453 334 aa5.13□□□□□ -1.59
CPR8YNR028W NTH1P32356 751 aa5.13□□□□□ -1.59
CPR8YNR028W SET3P36124 751 aa5.13□□□□□ -1.59
CPR8YNR028W UBS1P38290 277 aa5.13□□□□□ -1.59
CPR8YNR028W TDP1P38319 544 aa5.13□□□□□ -1.59
CPR8YNR028W BDH2P39713 417 aa5.13□□□□□ -1.59
CPR8YNR028W CCT7P42943 550 aaKnown RBP5.13□□□□□ -1.59
CPR8YNR028W IES1P43579 692 aa5.13□□□□□ -1.59
CPR8YNR028W MPS3P47069 682 aa5.13□□□□□ -1.59
CPR8YNR028W VPS73P53142 486 aaKnown RBP5.13□□□□□ -1.59
CPR8YNR028W YGR151CP53287 111 aa5.13□□□□□ -1.59
CPR8YNR028W MSL5Q12186 476 aaKnown RBP RIP-Chip data5.13□□□□□ -1.59not detected
CPR8YNR028W TAF3Q12297 353 aa5.13□□□□□ -1.59
CPR8YNR028W TAD3Q9URQ3 322 aa5.13□□□□□ -1.59
CPR8YNR028W HCA4P20448 770 aaKnown RBP5.12□□□□□ -1.59
CPR8YNR028W FUB1P25659 250 aa5.12□□□□□ -1.59
CPR8YNR028W VID28P40547 921 aa5.12□□□□□ -1.59
CPR8YNR028W DUG1P43616 481 aaKnown RBP5.12□□□□□ -1.59
CPR8YNR028W TAF4P50105 388 aa5.12□□□□□ -1.59
CPR8YNR028W YDL086WQ07505 273 aa5.12□□□□□ -1.59
CPR8YNR028W DAL3P32459 195 aa5.11□□□□□ -1.59
CPR8YNR028W EUG1P32474 517 aa5.11□□□□□ -1.59
CPR8YNR028W CTP1P38152 299 aa5.11□□□□□ -1.59
CPR8YNR028W YHR097CP38809 366 aaKnown RBP5.11□□□□□ -1.59
CPR8YNR028W KHA1P40309 873 aa5.11□□□□□ -1.59
CPR8YNR028W SPO1P53541 631 aa5.11□□□□□ -1.59
CPR8YNR028W RMP1Q12530 201 aa5.11□□□□□ -1.59
CPR8YNR028W GMH1P36125 273 aa5.1□□□□□ -1.59
CPR8YNR028W TAH11P47112 604 aa5.1□□□□□ -1.59
CPR8YNR028W RNR4P49723 345 aaKnown RBP5.1□□□□□ -1.59
CPR8YNR028W NSE5Q03718 556 aa5.1□□□□□ -1.59
CPR8YNR028W YSH1Q06224 779 aaPredicted RBP5.1□□□□□ -1.59
CPR8YNR028W TRE2Q08693 809 aa5.1□□□□□ -1.59
CPR8YNR028W CDC26P14724 124 aa5.09□□□□□ -1.59
CPR8YNR028W PRE4P30657 266 aa5.09□□□□□ -1.59
CPR8YNR028W MSS1P32559 526 aaPredicted RBP5.09□□□□□ -1.59
CPR8YNR028W KSP1P38691 1029 aaKnown RBP5.09□□□□□ -1.59
CPR8YNR028W GPP2P40106 250 aaKnown RBP5.09□□□□□ -1.59
CPR8YNR028W YPR027CQ12079 277 aa5.09□□□□□ -1.59
CPR8YNR028W SUT2Q12286 268 aa5.09□□□□□ -1.59
CPR8YNR028W NOP56Q12460 504 aaKnown RBP RIP-Chip data5.09□□□□□ -1.59not detected
CPR8YNR028W TMA17Q12513 150 aa5.09□□□□□ -1.59
CPR8YNR028W ACO1P19414 778 aaKnown RBP RIP-Chip data5.08□□□□□ -1.6not detected
CPR8YNR028W AEP2P22136 580 aa5.08□□□□□ -1.6
CPR8YNR028W KCC4P25389 1037 aa5.08□□□□□ -1.6
CPR8YNR028W APL3P38065 1025 aa5.08□□□□□ -1.6
CPR8YNR028W YHR033WP38690 423 aa5.08□□□□□ -1.6
CPR8YNR028W ENP2P48234 707 aaKnown RBP5.08□□□□□ -1.6
CPR8YNR028W NMA2P53204 395 aa5.08□□□□□ -1.6
CPR8YNR028W DIP5P53388 608 aa5.08□□□□□ -1.6
CPR8YNR028W SPC98P53540 846 aa5.08□□□□□ -1.6
CPR8YNR028W SKY1Q03656 742 aa5.08□□□□□ -1.6
CPR8YNR028W DGR2P32330 852 aa5.07□□□□□ -1.6
CPR8YNR028W MF(ALPHA)2P32435 120 aa5.07□□□□□ -1.6
CPR8YNR028W SER1P33330 395 aaKnown RBP5.07□□□□□ -1.6
CPR8YNR028W YBR071WP38243 211 aa5.07□□□□□ -1.6
CPR8YNR028W YIL166CP40445 542 aa5.07□□□□□ -1.6
CPR8YNR028W FDC1Q03034 503 aa5.07□□□□□ -1.6
CPR8YNR028W IZH3Q07959 543 aa5.07□□□□□ -1.6
CPR8YNR028W ELF1P36053 145 aa5.06□□□□□ -1.6
CPR8YNR028W CRG1P38892 291 aaRIP-Chip data5.06□□□□□ -1.6not detected
Retrieved 100 of 5,963 RNA–protein pairs in 351.6 ms