RNA–Protein interactions for RNA: YNL304W

YPT11, Transcript of Rab GTPase, yeastyeast

Gene YPT11, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT11YNL304W TMN3P40071 706 aa8.66□□□□□ -1.02
YPT11YNL304W MMF1P40185 145 aaKnown RBP8.66□□□□□ -1.02
YPT11YNL304W OPT1P40897 799 aa8.66□□□□□ -1.02
YPT11YNL304W PFD1P46988 109 aa8.66□□□□□ -1.02
YPT11YNL304W YNL247WP53852 767 aaKnown RBP8.66□□□□□ -1.02
YPT11YNL304W ECI1Q05871 280 aa8.66□□□□□ -1.02
YPT11YNL304W AIM39Q08223 395 aa8.66□□□□□ -1.02
YPT11YNL304W AIM41Q12032 185 aa8.66□□□□□ -1.02
YPT11YNL304W EMP46Q12396 444 aa8.66□□□□□ -1.02
YPT11YNL304W CDC8P00572 216 aa8.65□□□□□ -1.02
YPT11YNL304W BI2P03873 423 aa8.65□□□□□ -1.02
YPT11YNL304W BI4P03879 638 aa8.65□□□□□ -1.02
YPT11YNL304W ATP1P07251 545 aaKnown RBP8.65□□□□□ -1.02
YPT11YNL304W CAD1P24813 409 aaKnown RBP8.65□□□□□ -1.02
YPT11YNL304W NFU1P32860 256 aa8.65□□□□□ -1.02
YPT11YNL304W SLA2P33338 968 aa8.65□□□□□ -1.02
YPT11YNL304W HMT1P38074 348 aa8.65□□□□□ -1.02
YPT11YNL304W TGL3P40308 642 aa8.65□□□□□ -1.02
YPT11YNL304W TAF1P46677 1066 aa8.65□□□□□ -1.02
YPT11YNL304W ZAP1P47043 880 aa8.65□□□□□ -1.02
YPT11YNL304W VTC4P47075 721 aa8.65□□□□□ -1.02
YPT11YNL304W URH1Q04179 340 aa8.65□□□□□ -1.02
YPT11YNL304W VTI1Q04338 217 aa8.65□□□□□ -1.02
YPT11YNL304W CIR2Q08822 631 aa8.65□□□□□ -1.02
YPT11YNL304W GPM2Q12008 311 aa8.65□□□□□ -1.02
YPT11YNL304W VPS5Q92331 675 aa8.65□□□□□ -1.02
YPT11YNL304W BI3Q9ZZW7 517 aa8.65□□□□□ -1.02
YPT11YNL304W PUT4P15380 627 aa8.64□□□□□ -1.03
YPT11YNL304W RPO26P20435 155 aa8.64□□□□□ -1.03
YPT11YNL304W MRP4P32902 394 aa8.64□□□□□ -1.03
YPT11YNL304W TKL2P33315 681 aa8.64□□□□□ -1.03
YPT11YNL304W SRB2P34162 210 aa8.64□□□□□ -1.03
YPT11YNL304W RAD55P38953 406 aa8.64□□□□□ -1.03
YPT11YNL304W ASG1P40467 964 aa8.64□□□□□ -1.03
YPT11YNL304W YML6P51998 286 aa8.64□□□□□ -1.03
YPT11YNL304W NUT1P53114 1132 aa8.64□□□□□ -1.03
YPT11YNL304W PUS2P53167 370 aa8.64□□□□□ -1.03
YPT11YNL304W NOG2P53742 486 aaKnown RBP8.64□□□□□ -1.03
YPT11YNL304W YNL108CP53929 270 aa8.64□□□□□ -1.03
YPT11YNL304W PRM6Q04705 352 aa8.64□□□□□ -1.03
YPT11YNL304W TAF9Q05027 157 aa8.64□□□□□ -1.03
YPT11YNL304W THI20Q08224 551 aa8.64□□□□□ -1.03
YPT11YNL304W MRN1Q08925 612 aaKnown RBP RIP-Chip data8.64□□□□□ -1.03not detected
YPT11YNL304W VPS54Q12071 889 aa8.64□□□□□ -1.03
YPT11YNL304W YRR1Q12172 810 aa8.64□□□□□ -1.03
YPT11YNL304W RIO1Q12196 484 aaKnown RBP8.64□□□□□ -1.03
YPT11YNL304W UBR2Q07963 1872 aa8.64□□□□□ -1.03
YPT11YNL304W TPK1P06244 397 aa8.63□□□□□ -1.03
YPT11YNL304W TRX1P22217 103 aaKnown RBP8.63□□□□□ -1.03
YPT11YNL304W SWC5P38326 303 aa8.63□□□□□ -1.03
YPT11YNL304W TIF5P38431 405 aaKnown RBP8.63□□□□□ -1.03
YPT11YNL304W HEH2Q03281 663 aa8.63□□□□□ -1.03
YPT11YNL304W RKM2Q03942 479 aa8.63□□□□□ -1.03
YPT11YNL304W UFO1Q04511 668 aa8.63□□□□□ -1.03
YPT11YNL304W MRI1Q06489 411 aaKnown RBP8.63□□□□□ -1.03
YPT11YNL304W YDL073WQ07454 984 aa8.63□□□□□ -1.03
YPT11YNL304W FMP25Q08023 583 aa8.63□□□□□ -1.03
YPT11YNL304W NUR1Q12066 484 aa8.63□□□□□ -1.03
YPT11YNL304W MNL2Q12205 849 aa8.63□□□□□ -1.03
YPT11YNL304W PRC1P00729 532 aa8.62□□□□□ -1.03
YPT11YNL304W TUB3P09734 445 aaKnown RBP8.62□□□□□ -1.03
YPT11YNL304W MAS1P10507 462 aa8.62□□□□□ -1.03
YPT11YNL304W MET4P32389 672 aa8.62□□□□□ -1.03
YPT11YNL304W MAC1P35192 417 aa8.62□□□□□ -1.03
YPT11YNL304W PCA1P38360 1216 aa8.62□□□□□ -1.03
YPT11YNL304W LYS9P38999 446 aa8.62□□□□□ -1.03
YPT11YNL304W KHA1P40309 873 aa8.62□□□□□ -1.03
YPT11YNL304W YIL054WP40524 105 aa8.62□□□□□ -1.03
YPT11YNL304W VPS25P47142 202 aa8.62□□□□□ -1.03
YPT11YNL304W MET13P53128 600 aa8.62□□□□□ -1.03
YPT11YNL304W ADA2Q02336 434 aa8.62□□□□□ -1.03
YPT11YNL304W MTG1Q03151 367 aaPredicted RBP8.62□□□□□ -1.03
YPT11YNL304W EAR1Q03212 550 aa8.62□□□□□ -1.03
YPT11YNL304W DIS3Q08162 1001 aaKnown RBP8.62□□□□□ -1.03
YPT11YNL304W DDC1Q08949 612 aa8.62□□□□□ -1.03
YPT11YNL304W NBP2Q12163 236 aa8.62□□□□□ -1.03
YPT11YNL304W YPK1P12688 680 aaKnown RBP8.61□□□□□ -1.03
YPT11YNL304W IDI1P15496 288 aa8.61□□□□□ -1.03
YPT11YNL304W EST1P17214 699 aaPredicted RBP8.61□□□□□ -1.03
YPT11YNL304W GCG1P32656 232 aaKnown RBP8.61□□□□□ -1.03
YPT11YNL304W END3P39013 349 aa8.61□□□□□ -1.03
YPT11YNL304W GUF1P46943 645 aa8.61□□□□□ -1.03
YPT11YNL304W BFA1P47113 574 aa8.61□□□□□ -1.03
YPT11YNL304W YNL040WP53960 456 aaPredicted RBP8.61□□□□□ -1.03
YPT11YNL304W UTP6Q02354 440 aaKnown RBP8.61□□□□□ -1.03
YPT11YNL304W YMR187CQ03236 431 aa8.61□□□□□ -1.03
YPT11YNL304W SPO71Q03868 1245 aa8.61□□□□□ -1.03
YPT11YNL304W LEA1Q08963 238 aaPredicted RBP8.61□□□□□ -1.03
YPT11YNL304W THI21Q08975 551 aa8.61□□□□□ -1.03
YPT11YNL304W HRT3Q12347 344 aa8.61□□□□□ -1.03
YPT11YNL304W SPO16P17122 198 aa8.6□□□□□ -1.03
YPT11YNL304W ABZ1P37254 787 aaPredicted RBP8.6□□□□□ -1.03
YPT11YNL304W HSL7P38274 827 aa8.6□□□□□ -1.03
YPT11YNL304W YFL052WP43551 465 aa8.6□□□□□ -1.03
YPT11YNL304W RGD2P43556 714 aa8.6□□□□□ -1.03
YPT11YNL304W YNL011CP53980 444 aa8.6□□□□□ -1.03
YPT11YNL304W CDC55Q00362 526 aa8.6□□□□□ -1.03
YPT11YNL304W MTD1Q02046 320 aaKnown RBP8.6□□□□□ -1.03
YPT11YNL304W EMI2Q04409 500 aaKnown RBP8.6□□□□□ -1.03
YPT11YNL304W THI7Q05998 598 aa8.6□□□□□ -1.03
Retrieved 100 of 5,963 RNA–protein pairs in 59.5 ms