RNA–Protein interactions for RNA: YNL189W

SRP1, Transcript of Karyopherin alpha homolog, yeast

Gene SRP1, Length 1,629 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SRP1	YNL189W	AIM21	P40563	679 aa		4.11	□□□□□ -1.75
SRP1	YNL189W	BIT61	P47041	543 aa		4.11	□□□□□ -1.75
SRP1	YNL189W	PAN2	P53010	1115 aa	Predicted RBP	4.11	□□□□□ -1.75
SRP1	YNL189W	SPC105	P53148	917 aa		4.11	□□□□□ -1.75
SRP1	YNL189W	MUK1	Q02866	612 aa		4.11	□□□□□ -1.75
SRP1	YNL189W	THI22	Q06490	572 aa		4.11	□□□□□ -1.75
SRP1	YNL189W	NGL1	Q08213	363 aa	Known RBP	4.11	□□□□□ -1.75
SRP1	YNL189W	CCT3	P39077	534 aa	Known RBP	4.1	□□□□□ -1.75
SRP1	YNL189W	EAF5	P39995	279 aa		4.1	□□□□□ -1.75
SRP1	YNL189W	SLI1	P53304	468 aa		4.1	□□□□□ -1.75
SRP1	YNL189W	TUB2	P02557	457 aa	Known RBP	4.1	□□□□□ -1.75
SRP1	YNL189W	BCS1	P32839	456 aa		4.1	□□□□□ -1.75
SRP1	YNL189W	SEC6	P32844	805 aa		4.1	□□□□□ -1.75
SRP1	YNL189W	YIL077C	P40508	320 aa		4.1	□□□□□ -1.75
SRP1	YNL189W	MSE1	P48525	536 aa		4.1	□□□□□ -1.75
SRP1	YNL189W	RNR4	P49723	345 aa	Known RBP	4.1	□□□□□ -1.75
SRP1	YNL189W	YOL057W	Q08225	711 aa		4.1	□□□□□ -1.75
SRP1	YNL189W	PUS9	Q12069	462 aa		4.1	□□□□□ -1.75
SRP1	YNL189W	MLH3	Q12083	715 aa		4.1	□□□□□ -1.75
SRP1	YNL189W	ERG20	P08524	352 aa	Known RBP	4.09	□□□□□ -1.76
SRP1	YNL189W	FEN2	P25621	512 aa	Known RBP	4.09	□□□□□ -1.76
SRP1	YNL189W	MF(ALPHA)2	P32435	120 aa		4.09	□□□□□ -1.76
SRP1	YNL189W	CHS7	P38843	316 aa		4.09	□□□□□ -1.76
SRP1	YNL189W	RFX1	P48743	811 aa		4.09	□□□□□ -1.76
SRP1	YNL189W	SLD3	P53135	668 aa		4.09	□□□□□ -1.76
SRP1	YNL189W	VBA4	Q04602	768 aa	Known RBP	4.09	□□□□□ -1.76
SRP1	YNL189W	PHM6	Q05637	104 aa		4.09	□□□□□ -1.76
SRP1	YNL189W	CWC2	Q12046	339 aa	Predicted RBP	4.09	□□□□□ -1.76
SRP1	YNL189W	POM34	Q12445	299 aa		4.09	□□□□□ -1.76
SRP1	YNL189W	MTC7	P32633	139 aa		4.08	□□□□□ -1.76
SRP1	YNL189W	CDS1	P38221	457 aa		4.08	□□□□□ -1.76
SRP1	YNL189W	FMP52	P40008	231 aa		4.08	□□□□□ -1.76
SRP1	YNL189W	PXA1	P41909	870 aa		4.08	□□□□□ -1.76
SRP1	YNL189W	TAF4	P50105	388 aa		4.08	□□□□□ -1.76
SRP1	YNL189W	DIA2	Q08496	732 aa	Predicted RBP	4.08	□□□□□ -1.76
SRP1	YNL189W	ZRT2	Q12436	422 aa		4.08	□□□□□ -1.76
SRP1	YNL189W	SIR3	P06701	978 aa		4.07	□□□□□ -1.76
SRP1	YNL189W	KAR1	P11927	433 aa		4.07	□□□□□ -1.76
SRP1	YNL189W	PRE4	P30657	266 aa		4.07	□□□□□ -1.76
SRP1	YNL189W	DGR2	P32330	852 aa		4.07	□□□□□ -1.76
SRP1	YNL189W	PHO11	P35842	467 aa		4.07	□□□□□ -1.76
SRP1	YNL189W	COS111	P38308	924 aa		4.07	□□□□□ -1.76
SRP1	YNL189W	YHR033W	P38690	423 aa		4.07	□□□□□ -1.76
SRP1	YNL189W	PHO12	P38693	467 aa		4.07	□□□□□ -1.76
SRP1	YNL189W	ATG36	P46983	293 aa		4.07	□□□□□ -1.76
SRP1	YNL189W	YOR378W	Q08902	515 aa		4.07	□□□□□ -1.76
SRP1	YNL189W	TMA7	Q3E764	64 aa	Known RBP	4.07	□□□□□ -1.76
SRP1	YNL189W	RPS9B	P05755	195 aa	Known RBP	4.06	□□□□□ -1.76
SRP1	YNL189W	IRC5	P43610	853 aa		4.06	□□□□□ -1.76
SRP1	YNL189W	FHN1	P53279	174 aa		4.06	□□□□□ -1.76
SRP1	YNL189W	OMS1	Q06668	471 aa		4.06	□□□□□ -1.76
SRP1	YNL189W	YFT2	Q06676	274 aa		4.06	□□□□□ -1.76
SRP1	YNL189W	YKL033W-A	Q86ZR7	236 aa		4.06	□□□□□ -1.76
SRP1	YNL189W	YEL076C-A	P0CX16	216 aa		4.06	□□□□□ -1.76
SRP1	YNL189W	YLR464W	P0CX17	216 aa		4.06	□□□□□ -1.76
SRP1	YNL189W	TUP1	P16649	713 aa		4.06	□□□□□ -1.76
SRP1	YNL189W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
SRP1	YNL189W	MSS1	P32559	526 aa	Predicted RBP	4.06	□□□□□ -1.76
SRP1	YNL189W	RMA1	P36001	430 aa	Known RBP	4.06	□□□□□ -1.76
SRP1	YNL189W	PCL5	P38794	229 aa		4.06	□□□□□ -1.76
SRP1	YNL189W	CRG1	P38892	291 aa	RIP-Chip data	4.06	□□□□□ -1.76	not detected
SRP1	YNL189W	REV7	P38927	245 aa		4.06	□□□□□ -1.76
SRP1	YNL189W	YEL076C	P39971	216 aa		4.06	□□□□□ -1.76
SRP1	YNL189W	PEA2	P40091	420 aa		4.06	□□□□□ -1.76
SRP1	YNL189W	PRM2	P40534	656 aa		4.06	□□□□□ -1.76
SRP1	YNL189W	STB4	P50104	949 aa		4.06	□□□□□ -1.76
SRP1	YNL189W	TEL2	P53038	688 aa		4.06	□□□□□ -1.76
SRP1	YNL189W	TIM50	Q02776	476 aa		4.06	□□□□□ -1.76
SRP1	YNL189W	PEX15	Q08215	383 aa		4.06	□□□□□ -1.76
SRP1	YNL189W	SLX4	Q12098	748 aa		4.06	□□□□□ -1.76
SRP1	YNL189W	THR1	P17423	357 aa	Known RBP	4.05	□□□□□ -1.76
SRP1	YNL189W	KIN82	P25341	720 aa		4.05	□□□□□ -1.76
SRP1	YNL189W	UBS1	P38290	277 aa		4.05	□□□□□ -1.76
SRP1	YNL189W	YHR097C	P38809	366 aa	Known RBP	4.05	□□□□□ -1.76
SRP1	YNL189W	FTR1	P40088	404 aa		4.05	□□□□□ -1.76
SRP1	YNL189W	PIG2	P40187	538 aa		4.05	□□□□□ -1.76
SRP1	YNL189W	RTK1	Q12100	620 aa	Predicted RBP	4.05	□□□□□ -1.76
SRP1	YNL189W	CHS5	Q12114	671 aa	Known RBP	4.05	□□□□□ -1.76
SRP1	YNL189W	USV1	Q12132	391 aa		4.05	□□□□□ -1.76
SRP1	YNL189W	SST2	P11972	698 aa	Known RBP	4.04	□□□□□ -1.76
SRP1	YNL189W	SET3	P36124	751 aa		4.04	□□□□□ -1.76
SRP1	YNL189W	EHT1	P38295	451 aa		4.04	□□□□□ -1.76
SRP1	YNL189W	TMN3	P40071	706 aa		4.04	□□□□□ -1.76
SRP1	YNL189W	EMP65	P40085	556 aa		4.04	□□□□□ -1.76
SRP1	YNL189W	YIL092W	P40497	633 aa		4.04	□□□□□ -1.76
SRP1	YNL189W	MPS3	P47069	682 aa		4.04	□□□□□ -1.76
SRP1	YNL189W	YDL183C	P48569	320 aa		4.04	□□□□□ -1.76
SRP1	YNL189W	NSE5	Q03718	556 aa		4.04	□□□□□ -1.76
SRP1	YNL189W	SEC15	P22224	910 aa		4.03	□□□□□ -1.76
SRP1	YNL189W	SRP68	P38687	599 aa	Known RBP	4.03	□□□□□ -1.76
SRP1	YNL189W	MTD1	Q02046	320 aa	Known RBP	4.03	□□□□□ -1.76
SRP1	YNL189W	PRP28	P23394	588 aa		4.03	□□□□□ -1.77
SRP1	YNL189W	PRP22	P24384	1145 aa	Known RBP	4.03	□□□□□ -1.77
SRP1	YNL189W	NIC96	P34077	839 aa		4.03	□□□□□ -1.77
SRP1	YNL189W	CBR1	P38626	284 aa	Known RBP	4.03	□□□□□ -1.77
SRP1	YNL189W	KHA1	P40309	873 aa		4.03	□□□□□ -1.77
SRP1	YNL189W	DAS1	P47005	663 aa		4.03	□□□□□ -1.77
SRP1	YNL189W	SPO1	P53541	631 aa		4.03	□□□□□ -1.77
SRP1	YNL189W	RIA1	P53893	1110 aa		4.03	□□□□□ -1.77
SRP1	YNL189W	CEG1	Q01159	459 aa	Predicted RBP	4.03	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 35.9 ms