RNA–Protein interactions for RNA: YML107C

PML39, Transcript of Protein required for nuclear retention of unspliced pre-mRNAs, yeast

Gene PML39, Length 1,005 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PML39	YML107C	PRP22	P24384	1145 aa	Known RBP	4.96	□□□□□ -1.62
PML39	YML107C	OAR1	P35731	278 aa		4.96	□□□□□ -1.62
PML39	YML107C	MOH1	P38191	138 aa		4.96	□□□□□ -1.62
PML39	YML107C	PIG2	P40187	538 aa		4.96	□□□□□ -1.62
PML39	YML107C	PXA1	P41909	870 aa		4.96	□□□□□ -1.62
PML39	YML107C	YJR120W	P47157	116 aa		4.96	□□□□□ -1.62
PML39	YML107C	PPN1	Q04119	674 aa		4.96	□□□□□ -1.62
PML39	YML107C	YPS7	Q06325	596 aa		4.96	□□□□□ -1.62
PML39	YML107C	DAL3	P32459	195 aa		4.95	□□□□□ -1.62
PML39	YML107C	YBR071W	P38243	211 aa		4.95	□□□□□ -1.62
PML39	YML107C	BIT61	P47041	543 aa		4.95	□□□□□ -1.62
PML39	YML107C	SPC105	P53148	917 aa		4.95	□□□□□ -1.62
PML39	YML107C	FOL1	P53848	824 aa		4.95	□□□□□ -1.62
PML39	YML107C	THI22	Q06490	572 aa		4.95	□□□□□ -1.62
PML39	YML107C	APM4	Q99186	491 aa		4.95	□□□□□ -1.62
PML39	YML107C	HCA4	P20448	770 aa	Known RBP	4.94	□□□□□ -1.62
PML39	YML107C	MRC1	P25588	1096 aa		4.94	□□□□□ -1.62
PML39	YML107C	BCS1	P32839	456 aa		4.94	□□□□□ -1.62
PML39	YML107C	PHO11	P35842	467 aa		4.94	□□□□□ -1.62
PML39	YML107C	FAT1	P38225	669 aa		4.94	□□□□□ -1.62
PML39	YML107C	BIT2	P38346	545 aa		4.94	□□□□□ -1.62
PML39	YML107C	PAF1	P38351	445 aa		4.94	□□□□□ -1.62
PML39	YML107C	PHO12	P38693	467 aa		4.94	□□□□□ -1.62
PML39	YML107C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.94	□□□□□ -1.62	not detected
PML39	YML107C	YIL077C	P40508	320 aa		4.94	□□□□□ -1.62
PML39	YML107C	VID28	P40547	921 aa		4.94	□□□□□ -1.62
PML39	YML107C	RCR2	Q03446	210 aa	Known RBP	4.94	□□□□□ -1.62
PML39	YML107C	SKY1	Q03656	742 aa		4.94	□□□□□ -1.62
PML39	YML107C	SIR3	P06701	978 aa		4.93	□□□□□ -1.62
PML39	YML107C	KAR1	P11927	433 aa		4.93	□□□□□ -1.62
PML39	YML107C	PRP28	P23394	588 aa		4.93	□□□□□ -1.62
PML39	YML107C	GPP2	P40106	250 aa	Known RBP	4.93	□□□□□ -1.62
PML39	YML107C	ENP2	P48234	707 aa	Known RBP	4.93	□□□□□ -1.62
PML39	YML107C	PEX14	P53112	341 aa		4.93	□□□□□ -1.62
PML39	YML107C	YML122C	Q03207	126 aa		4.93	□□□□□ -1.62
PML39	YML107C	CHS5	Q12114	671 aa	Known RBP	4.93	□□□□□ -1.62
PML39	YML107C	ABF1	P14164	731 aa		4.92	□□□□□ -1.62
PML39	YML107C	CDC43	P18898	376 aa		4.92	□□□□□ -1.62
PML39	YML107C	FEN2	P25621	512 aa	Known RBP	4.92	□□□□□ -1.62
PML39	YML107C	DGR2	P32330	852 aa		4.92	□□□□□ -1.62
PML39	YML107C	NTH1	P32356	751 aa		4.92	□□□□□ -1.62
PML39	YML107C	TOM20	P35180	183 aa		4.92	□□□□□ -1.62
PML39	YML107C	COS111	P38308	924 aa		4.92	□□□□□ -1.62
PML39	YML107C	BUD8	P41698	603 aa		4.92	□□□□□ -1.62
PML39	YML107C	IES1	P43579	692 aa		4.92	□□□□□ -1.62
PML39	YML107C	NIT2	P47016	307 aa		4.92	□□□□□ -1.62
PML39	YML107C	TAF4	P50105	388 aa		4.92	□□□□□ -1.62
PML39	YML107C	SLD3	P53135	668 aa		4.92	□□□□□ -1.62
PML39	YML107C	RGC1	Q06108	1083 aa	Known RBP	4.92	□□□□□ -1.62
PML39	YML107C	STP4	Q07351	490 aa		4.92	□□□□□ -1.62
PML39	YML107C	IME1	P21190	360 aa		4.91	□□□□□ -1.62
PML39	YML107C	YHR033W	P38690	423 aa		4.91	□□□□□ -1.62
PML39	YML107C	EMP65	P40085	556 aa		4.91	□□□□□ -1.62
PML39	YML107C	PEA2	P40091	420 aa		4.91	□□□□□ -1.62
PML39	YML107C	NDC80	P40460	691 aa		4.91	□□□□□ -1.62
PML39	YML107C	FHN1	P53279	174 aa		4.91	□□□□□ -1.62
PML39	YML107C	COG6	P53959	839 aa		4.91	□□□□□ -1.62
PML39	YML107C	MLH3	Q12083	715 aa		4.91	□□□□□ -1.62
PML39	YML107C	USV1	Q12132	391 aa		4.91	□□□□□ -1.62
PML39	YML107C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
PML39	YML107C	COX11	P19516	300 aa	Known RBP	4.9	□□□□□ -1.63
PML39	YML107C	SER1	P33330	395 aa	Known RBP	4.9	□□□□□ -1.63
PML39	YML107C	TFC4	P33339	1025 aa		4.9	□□□□□ -1.63
PML39	YML107C	ARG2	P40360	574 aa		4.9	□□□□□ -1.63
PML39	YML107C	RFX1	P48743	811 aa		4.9	□□□□□ -1.63
PML39	YML107C	CTR1	P49573	406 aa		4.9	□□□□□ -1.63
PML39	YML107C	SPO1	P53541	631 aa		4.9	□□□□□ -1.63
PML39	YML107C	NSE5	Q03718	556 aa		4.9	□□□□□ -1.63
PML39	YML107C	YFT2	Q06676	274 aa		4.9	□□□□□ -1.63
PML39	YML107C	CDC26	P14724	124 aa		4.89	□□□□□ -1.63
PML39	YML107C	THR1	P17423	357 aa	Known RBP	4.89	□□□□□ -1.63
PML39	YML107C	KIN3	P22209	435 aa		4.89	□□□□□ -1.63
PML39	YML107C	SDS3	P40505	327 aa		4.89	□□□□□ -1.63
PML39	YML107C	MPS3	P47069	682 aa		4.89	□□□□□ -1.63
PML39	YML107C	GND2	P53319	492 aa		4.89	□□□□□ -1.63
PML39	YML107C	ATG4	P53867	494 aa		4.89	□□□□□ -1.63
PML39	YML107C	SMX3	P54999	86 aa	Predicted RBP	4.89	□□□□□ -1.63
PML39	YML107C	TMN2	Q04562	672 aa		4.89	□□□□□ -1.63
PML39	YML107C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.88	□□□□□ -1.63	not detected
PML39	YML107C	SEC6	P32844	805 aa		4.88	□□□□□ -1.63
PML39	YML107C	YPT7	P32939	208 aa		4.88	□□□□□ -1.63
PML39	YML107C	GLG1	P36143	616 aa		4.88	□□□□□ -1.63
PML39	YML107C	STU2	P46675	888 aa		4.88	□□□□□ -1.63
PML39	YML107C	YDL086W	Q07505	273 aa		4.88	□□□□□ -1.63
PML39	YML107C	NGL1	Q08213	363 aa	Known RBP	4.88	□□□□□ -1.63
PML39	YML107C	FUB1	P25659	250 aa		4.87	□□□□□ -1.63
PML39	YML107C	PRE4	P30657	266 aa		4.87	□□□□□ -1.63
PML39	YML107C	PLC1	P32383	869 aa		4.87	□□□□□ -1.63
PML39	YML107C	MF(ALPHA)2	P32435	120 aa		4.87	□□□□□ -1.63
PML39	YML107C	HXT4	P32467	576 aa		4.87	□□□□□ -1.63
PML39	YML107C	CTP1	P38152	299 aa		4.87	□□□□□ -1.63
PML39	YML107C	SRP68	P38687	599 aa	Known RBP	4.87	□□□□□ -1.63
PML39	YML107C	YJL206C	P39529	758 aa		4.87	□□□□□ -1.63
PML39	YML107C	YGR151C	P53287	111 aa		4.87	□□□□□ -1.63
PML39	YML107C	SQS1	P53866	767 aa	Known RBP	4.87	□□□□□ -1.63
PML39	YML107C	PHM6	Q05637	104 aa		4.87	□□□□□ -1.63
PML39	YML107C	YSH1	Q06224	779 aa	Predicted RBP	4.87	□□□□□ -1.63
PML39	YML107C	PEX15	Q08215	383 aa		4.87	□□□□□ -1.63
PML39	YML107C	AIM41	Q12032	185 aa		4.87	□□□□□ -1.63
PML39	YML107C	MRH1	Q12117	320 aa	Predicted RBP	4.87	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 17 ms