RNA–Protein interactions for RNA: YML097C

VPS9, Transcript of Guanine nucleotide exchange factor (GEF), yeastyeast

Gene VPS9, Length 1,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS9YML097C SQS1P53866 767 aaKnown RBP3.85□□□□□ -1.79
VPS9YML097C RCR2Q03446 210 aaKnown RBP3.85□□□□□ -1.79
VPS9YML097C CIA1Q05583 330 aa3.85□□□□□ -1.79
VPS9YML097C YDR056CQ12025 205 aa3.85□□□□□ -1.79
VPS9YML097C RTK1Q12100 620 aaPredicted RBP3.85□□□□□ -1.79
VPS9YML097C GPR1Q12361 961 aa3.85□□□□□ -1.79
VPS9YML097C DFG16Q99234 619 aa3.85□□□□□ -1.79
VPS9YML097C GFA1P14742 717 aaKnown RBP3.84□□□□□ -1.79
VPS9YML097C FRS1P15624 595 aaKnown RBP3.84□□□□□ -1.79
VPS9YML097C RER1P25560 188 aa3.84□□□□□ -1.79
VPS9YML097C SLC1P33333 303 aa3.84□□□□□ -1.79
VPS9YML097C APT2P36973 181 aa3.84□□□□□ -1.79
VPS9YML097C TMA108P40462 946 aa3.84□□□□□ -1.79
VPS9YML097C ENP2P48234 707 aaKnown RBP3.84□□□□□ -1.79
VPS9YML097C MDR1P53258 950 aa3.84□□□□□ -1.79
VPS9YML097C ASI2P53895 289 aa3.84□□□□□ -1.79
VPS9YML097C PLB2Q03674 706 aa3.84□□□□□ -1.79
VPS9YML097C VPS36Q06696 566 aa3.84□□□□□ -1.79
VPS9YML097C RRI2Q12348 645 aa3.84□□□□□ -1.79
VPS9YML097C DBP10Q12389 995 aaKnown RBP3.84□□□□□ -1.79
VPS9YML097C YLR415CO13578 112 aa3.83□□□□□ -1.8
VPS9YML097C PHO5P00635 467 aa3.83□□□□□ -1.8
VPS9YML097C PRP4P20053 465 aaKnown RBP3.83□□□□□ -1.8
VPS9YML097C SEC21P32074 935 aaKnown RBP3.83□□□□□ -1.8
VPS9YML097C MF(ALPHA)2P32435 120 aa3.83□□□□□ -1.8
VPS9YML097C PET127P32606 800 aa3.83□□□□□ -1.8
VPS9YML097C TAF5P38129 798 aa3.83□□□□□ -1.8
VPS9YML097C GIP4P39732 760 aa3.83□□□□□ -1.8
VPS9YML097C NDE1P40215 560 aa3.83□□□□□ -1.8
VPS9YML097C PSF2P40359 213 aa3.83□□□□□ -1.8
VPS9YML097C BUD8P41698 603 aa3.83□□□□□ -1.8
VPS9YML097C TAF4P50105 388 aa3.83□□□□□ -1.8
VPS9YML097C MEP3P53390 489 aa3.83□□□□□ -1.8
VPS9YML097C ARC35P53731 342 aaKnown RBP3.83□□□□□ -1.8
VPS9YML097C MRPL13Q02204 264 aa3.83□□□□□ -1.8
VPS9YML097C VBA4Q04602 768 aaKnown RBP3.83□□□□□ -1.8
VPS9YML097C SGD1Q06132 899 aa3.83□□□□□ -1.8
VPS9YML097C ADY3Q07732 790 aa3.83□□□□□ -1.8
VPS9YML097C HOS1Q12214 470 aa3.83□□□□□ -1.8
VPS9YML097C ECM3Q99252 613 aa3.83□□□□□ -1.8
VPS9YML097C RPS9BP05755 195 aaKnown RBP3.82□□□□□ -1.8
VPS9YML097C ERG20P08524 352 aaKnown RBP3.82□□□□□ -1.8
VPS9YML097C POL3P15436 1097 aa3.82□□□□□ -1.8
VPS9YML097C ACO1P19414 778 aaKnown RBP RIP-Chip data3.82□□□□□ -1.8not detected
VPS9YML097C CAD1P24813 409 aaKnown RBP3.82□□□□□ -1.8
VPS9YML097C EMC1P25574 760 aa3.82□□□□□ -1.8
VPS9YML097C STE14P32584 239 aa3.82□□□□□ -1.8
VPS9YML097C JNM1P36224 373 aa3.82□□□□□ -1.8
VPS9YML097C PUG1P40100 303 aa3.82□□□□□ -1.8
VPS9YML097C PXA1P41909 870 aa3.82□□□□□ -1.8
VPS9YML097C MET12P46151 657 aa3.82□□□□□ -1.8
VPS9YML097C ECL1P48235 211 aa3.82□□□□□ -1.8
VPS9YML097C MNT2P53059 558 aa3.82□□□□□ -1.8
VPS9YML097C ARG5,6Q01217 863 aa3.82□□□□□ -1.8
VPS9YML097C REC102Q02721 264 aa3.82□□□□□ -1.8
VPS9YML097C OPY2Q06810 360 aa3.82□□□□□ -1.8
VPS9YML097C PEX19Q07418 342 aa3.82□□□□□ -1.8
VPS9YML097C GPB1Q08886 897 aa3.82□□□□□ -1.8
VPS9YML097C ENT1Q12518 454 aa3.82□□□□□ -1.8
VPS9YML097C ATG11Q12527 1178 aa3.82□□□□□ -1.8
VPS9YML097C RPP2AP05319 106 aaKnown RBP3.81□□□□□ -1.8
VPS9YML097C HIS5P07172 385 aa3.81□□□□□ -1.8
VPS9YML097C TUB3P09734 445 aaKnown RBP3.81□□□□□ -1.8
VPS9YML097C IME1P21190 360 aa3.81□□□□□ -1.8
VPS9YML097C RNR1P21524 888 aaKnown RBP3.81□□□□□ -1.8
VPS9YML097C SEC15P22224 910 aa3.81□□□□□ -1.8
VPS9YML097C CLB4P24871 460 aa3.81□□□□□ -1.8
VPS9YML097C MFT1P33441 392 aaKnown RBP3.81□□□□□ -1.8
VPS9YML097C RRN3P36070 627 aa3.81□□□□□ -1.8
VPS9YML097C YHR112CP38716 378 aa3.81□□□□□ -1.8
VPS9YML097C LAM1P38851 1228 aa3.81□□□□□ -1.8
VPS9YML097C STT3P39007 718 aaKnown RBP3.81□□□□□ -1.8
VPS9YML097C KAP123P40069 1113 aaKnown RBP3.81□□□□□ -1.8
VPS9YML097C RAD26P40352 1085 aa3.81□□□□□ -1.8
VPS9YML097C FAF1P40546 346 aaPredicted RBP3.81□□□□□ -1.8
VPS9YML097C URM1P40554 99 aaPredicted RBP3.81□□□□□ -1.8
VPS9YML097C MAD2P40958 196 aa3.81□□□□□ -1.8
VPS9YML097C CPR6P53691 371 aaKnown RBP3.81□□□□□ -1.8
VPS9YML097C YNR071CP53757 342 aa3.81□□□□□ -1.8
VPS9YML097C NRG1Q03125 231 aa3.81□□□□□ -1.8
VPS9YML097C GIR2Q03768 265 aaPredicted RBP3.81□□□□□ -1.8
VPS9YML097C NPC2Q12408 173 aa3.81□□□□□ -1.8
VPS9YML097C VPS5Q92331 675 aa3.81□□□□□ -1.8
VPS9YML097C PCK1P10963 549 aa3.8□□□□□ -1.8
VPS9YML097C NCP1P16603 691 aaKnown RBP3.8□□□□□ -1.8
VPS9YML097C MCM3P24279 971 aaKnown RBP3.8□□□□□ -1.8
VPS9YML097C SWI4P25302 1093 aaKnown RBP3.8□□□□□ -1.8
VPS9YML097C APL2P36000 726 aaPredicted RBP3.8□□□□□ -1.8
VPS9YML097C YBR259WP38338 688 aa3.8□□□□□ -1.8
VPS9YML097C RPP1P38786 293 aa3.8□□□□□ -1.8
VPS9YML097C ESF2P53743 316 aaKnown RBP3.8□□□□□ -1.8
VPS9YML097C SNO2P53823 222 aa3.8□□□□□ -1.8
VPS9YML097C ACS1Q01574 713 aa3.8□□□□□ -1.8
VPS9YML097C YAP6Q03935 383 aa3.8□□□□□ -1.8
VPS9YML097C PPN1Q04119 674 aa3.8□□□□□ -1.8
VPS9YML097C MCM21Q06675 368 aa3.8□□□□□ -1.8
VPS9YML097C DIN7Q12086 430 aa3.8□□□□□ -1.8
VPS9YML097C YDL177CQ12257 170 aa3.8□□□□□ -1.8
VPS9YML097C CLF1Q12309 687 aaPredicted RBP3.8□□□□□ -1.8
VPS9YML097C URA3P03962 267 aa3.79□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms