RNA–Protein interactions for RNA: YLR243W

GPN3, Transcript of Putative GTPase with a role in biogenesis of RNA pol II and polIII, yeast

Gene GPN3, Length 819 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GPN3	YLR243W	IRC10	Q08118	586 aa		4.99	□□□□□ -1.61
GPN3	YLR243W	HFI1	Q12060	488 aa		4.99	□□□□□ -1.61
GPN3	YLR243W	USV1	Q12132	391 aa		4.99	□□□□□ -1.61
GPN3	YLR243W	RPS17A	P02407	136 aa	Known RBP	4.98	□□□□□ -1.61
GPN3	YLR243W	RPS17B	P14127	136 aa	Known RBP	4.98	□□□□□ -1.61
GPN3	YLR243W	YIL077C	P40508	320 aa		4.98	□□□□□ -1.61
GPN3	YLR243W	BUD8	P41698	603 aa		4.98	□□□□□ -1.61
GPN3	YLR243W	MNN11	P46985	422 aa	Known RBP	4.98	□□□□□ -1.61
GPN3	YLR243W	HFD1	Q04458	532 aa		4.98	□□□□□ -1.61
GPN3	YLR243W	SUT2	Q12286	268 aa		4.98	□□□□□ -1.61
GPN3	YLR243W	POM34	Q12445	299 aa		4.98	□□□□□ -1.61
GPN3	YLR243W	ERG20	P08524	352 aa	Known RBP	4.97	□□□□□ -1.61
GPN3	YLR243W	CDC26	P14724	124 aa		4.97	□□□□□ -1.61
GPN3	YLR243W	MSS1	P32559	526 aa	Predicted RBP	4.97	□□□□□ -1.61
GPN3	YLR243W	SER1	P33330	395 aa	Known RBP	4.97	□□□□□ -1.61
GPN3	YLR243W	NDC80	P40460	691 aa		4.97	□□□□□ -1.61
GPN3	YLR243W	YAP1802	P53309	568 aa		4.97	□□□□□ -1.61
GPN3	YLR243W	CHS5	Q12114	671 aa	Known RBP	4.97	□□□□□ -1.61
GPN3	YLR243W	QRI1	P43123	477 aa	Known RBP	4.96	□□□□□ -1.62
GPN3	YLR243W	IES1	P43579	692 aa		4.96	□□□□□ -1.62
GPN3	YLR243W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.96	□□□□□ -1.62	not detected
GPN3	YLR243W	APM4	Q99186	491 aa		4.96	□□□□□ -1.62
GPN3	YLR243W	TSR4	P25040	408 aa		4.95	□□□□□ -1.62
GPN3	YLR243W	YHR097C	P38809	366 aa	Known RBP	4.95	□□□□□ -1.62
GPN3	YLR243W	PIG2	P40187	538 aa		4.95	□□□□□ -1.62
GPN3	YLR243W	VID28	P40547	921 aa		4.95	□□□□□ -1.62
GPN3	YLR243W	MPS3	P47069	682 aa		4.95	□□□□□ -1.62
GPN3	YLR243W	BFA1	P47113	574 aa		4.95	□□□□□ -1.62
GPN3	YLR243W	YJR120W	P47157	116 aa		4.95	□□□□□ -1.62
GPN3	YLR243W	DIA2	Q08496	732 aa	Predicted RBP	4.95	□□□□□ -1.62
GPN3	YLR243W	ATP12	P22135	325 aa		4.94	□□□□□ -1.62
GPN3	YLR243W	COS111	P38308	924 aa		4.94	□□□□□ -1.62
GPN3	YLR243W	VBA4	Q04602	768 aa	Known RBP	4.94	□□□□□ -1.62
GPN3	YLR243W	YFT2	Q06676	274 aa		4.94	□□□□□ -1.62
GPN3	YLR243W	TAF3	Q12297	353 aa		4.94	□□□□□ -1.62
GPN3	YLR243W	RPS9B	P05755	195 aa	Known RBP	4.93	□□□□□ -1.62
GPN3	YLR243W	KIN3	P22209	435 aa		4.93	□□□□□ -1.62
GPN3	YLR243W	EUG1	P32474	517 aa		4.93	□□□□□ -1.62
GPN3	YLR243W	DID4	P36108	232 aa		4.93	□□□□□ -1.62
GPN3	YLR243W	TDP1	P38319	544 aa		4.93	□□□□□ -1.62
GPN3	YLR243W	DUN1	P39009	513 aa		4.93	□□□□□ -1.62
GPN3	YLR243W	YJL206C	P39529	758 aa		4.93	□□□□□ -1.62
GPN3	YLR243W	YGL081W	P53156	320 aa		4.93	□□□□□ -1.62
GPN3	YLR243W	ATG4	P53867	494 aa		4.93	□□□□□ -1.62
GPN3	YLR243W	PTA1	Q01329	785 aa	Predicted RBP	4.93	□□□□□ -1.62
GPN3	YLR243W	TMA17	Q12513	150 aa		4.93	□□□□□ -1.62
GPN3	YLR243W	PRP28	P23394	588 aa		4.92	□□□□□ -1.62
GPN3	YLR243W	EMP70	P32802	667 aa		4.92	□□□□□ -1.62
GPN3	YLR243W	GPP2	P40106	250 aa	Known RBP	4.92	□□□□□ -1.62
GPN3	YLR243W	KHA1	P40309	873 aa		4.92	□□□□□ -1.62
GPN3	YLR243W	VPS73	P53142	486 aa	Known RBP	4.92	□□□□□ -1.62
GPN3	YLR243W	YGR151C	P53287	111 aa		4.92	□□□□□ -1.62
GPN3	YLR243W	TIM50	Q02776	476 aa		4.92	□□□□□ -1.62
GPN3	YLR243W	TUP1	P16649	713 aa		4.91	□□□□□ -1.62
GPN3	YLR243W	KIN82	P25341	720 aa		4.91	□□□□□ -1.62
GPN3	YLR243W	PRE4	P30657	266 aa		4.91	□□□□□ -1.62
GPN3	YLR243W	MTC7	P32633	139 aa		4.91	□□□□□ -1.62
GPN3	YLR243W	CDS1	P38221	457 aa		4.91	□□□□□ -1.62
GPN3	YLR243W	ENP1	P38333	483 aa	Known RBP	4.91	□□□□□ -1.62
GPN3	YLR243W	KSP1	P38691	1029 aa	Known RBP	4.91	□□□□□ -1.62
GPN3	YLR243W	ARG2	P40360	574 aa		4.91	□□□□□ -1.62
GPN3	YLR243W	PXA1	P41909	870 aa		4.91	□□□□□ -1.62
GPN3	YLR243W	TAH11	P47112	604 aa		4.91	□□□□□ -1.62
GPN3	YLR243W	SNF12	P53628	566 aa		4.91	□□□□□ -1.62
GPN3	YLR243W	YDL086W	Q07505	273 aa		4.91	□□□□□ -1.62
GPN3	YLR243W	FUB1	P25659	250 aa		4.9	□□□□□ -1.63
GPN3	YLR243W	HXT4	P32467	576 aa		4.9	□□□□□ -1.63
GPN3	YLR243W	CTP1	P38152	299 aa		4.9	□□□□□ -1.63
GPN3	YLR243W	CRG1	P38892	291 aa	RIP-Chip data	4.9	□□□□□ -1.63	not detected
GPN3	YLR243W	BDH2	P39713	417 aa		4.9	□□□□□ -1.63
GPN3	YLR243W	STU2	P46675	888 aa		4.9	□□□□□ -1.63
GPN3	YLR243W	NIT2	P47016	307 aa		4.9	□□□□□ -1.63
GPN3	YLR243W	CTR1	P49573	406 aa		4.9	□□□□□ -1.63
GPN3	YLR243W	TAF4	P50105	388 aa		4.9	□□□□□ -1.63
GPN3	YLR243W	NMA2	P53204	395 aa		4.9	□□□□□ -1.63
GPN3	YLR243W	CLF1	Q12309	687 aa	Predicted RBP	4.9	□□□□□ -1.63
GPN3	YLR243W	GLG1	P36143	616 aa		4.89	□□□□□ -1.63
GPN3	YLR243W	SPO1	P53541	631 aa		4.89	□□□□□ -1.63
GPN3	YLR243W	IZH3	Q07959	543 aa		4.89	□□□□□ -1.63
GPN3	YLR243W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.89	□□□□□ -1.63	not detected
GPN3	YLR243W	SEC15	P22224	910 aa		4.88	□□□□□ -1.63
GPN3	YLR243W	MF(ALPHA)2	P32435	120 aa		4.88	□□□□□ -1.63
GPN3	YLR243W	ELF1	P36053	145 aa		4.88	□□□□□ -1.63
GPN3	YLR243W	YBR071W	P38243	211 aa		4.88	□□□□□ -1.63
GPN3	YLR243W	MIT1	P40002	666 aa		4.88	□□□□□ -1.63
GPN3	YLR243W	TMN3	P40071	706 aa		4.88	□□□□□ -1.63
GPN3	YLR243W	FTR1	P40088	404 aa		4.88	□□□□□ -1.63
GPN3	YLR243W	PRM2	P40534	656 aa		4.88	□□□□□ -1.63
GPN3	YLR243W	DUG1	P43616	481 aa	Known RBP	4.88	□□□□□ -1.63
GPN3	YLR243W	COG6	P53959	839 aa		4.88	□□□□□ -1.63
GPN3	YLR243W	YPR027C	Q12079	277 aa		4.88	□□□□□ -1.63
GPN3	YLR243W	RKI1	Q12189	258 aa		4.88	□□□□□ -1.63
GPN3	YLR243W	RMP1	Q12530	201 aa		4.88	□□□□□ -1.63
GPN3	YLR243W	CDC43	P18898	376 aa		4.87	□□□□□ -1.63
GPN3	YLR243W	YDL183C	P48569	320 aa		4.87	□□□□□ -1.63
GPN3	YLR243W	NGL1	Q08213	363 aa	Known RBP	4.87	□□□□□ -1.63
GPN3	YLR243W	LAM4	P38800	1345 aa		4.87	□□□□□ -1.63
GPN3	YLR243W	BNR1	P40450	1375 aa		4.87	□□□□□ -1.63
GPN3	YLR243W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
GPN3	YLR243W	PRP22	P24384	1145 aa	Known RBP	4.86	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 90.2 ms