RNA–Protein interactions for RNA: YLR197W

NOP56, Transcript of Essential evolutionarily-conserved nucleolar protein, yeastyeast

Gene NOP56, Length 1,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NOP56YLR197W IME1P21190 360 aa4.16□□□□□ -1.74
NOP56YLR197W DAL3P32459 195 aa4.16□□□□□ -1.74
NOP56YLR197W CBR1P38626 284 aaKnown RBP4.16□□□□□ -1.74
NOP56YLR197W UBA2P52488 636 aa4.16□□□□□ -1.74
NOP56YLR197W STP4Q07351 490 aa4.16□□□□□ -1.74
NOP56YLR197W TMA17Q12513 150 aa4.16□□□□□ -1.74
NOP56YLR197W GLN4P13188 809 aaKnown RBP4.16□□□□□ -1.74
NOP56YLR197W PRP28P23394 588 aa4.16□□□□□ -1.74
NOP56YLR197W KIN82P25341 720 aa4.16□□□□□ -1.74
NOP56YLR197W DUN1P39009 513 aa4.16□□□□□ -1.74
NOP56YLR197W GPP2P40106 250 aaKnown RBP4.16□□□□□ -1.74
NOP56YLR197W PIG2P40187 538 aa4.16□□□□□ -1.74
NOP56YLR197W BUD8P41698 603 aa4.16□□□□□ -1.74
NOP56YLR197W PXA1P41909 870 aa4.16□□□□□ -1.74
NOP56YLR197W IES1P43579 692 aa4.16□□□□□ -1.74
NOP56YLR197W SMX3P54999 86 aaPredicted RBP4.16□□□□□ -1.74
NOP56YLR197W CLF1Q12309 687 aaPredicted RBP4.16□□□□□ -1.74
NOP56YLR197W SEC15P22224 910 aa4.15□□□□□ -1.75
NOP56YLR197W FEN2P25621 512 aaKnown RBP4.15□□□□□ -1.75
NOP56YLR197W YBR071WP38243 211 aa4.15□□□□□ -1.75
NOP56YLR197W SDS3P40505 327 aa4.15□□□□□ -1.75
NOP56YLR197W YIL077CP40508 320 aa4.15□□□□□ -1.75
NOP56YLR197W YJR120WP47157 116 aa4.15□□□□□ -1.75
NOP56YLR197W GND2P53319 492 aa4.15□□□□□ -1.75
NOP56YLR197W RMP1Q12530 201 aa4.15□□□□□ -1.75
NOP56YLR197W SSB1P11484 613 aaKnown RBP4.14□□□□□ -1.75
NOP56YLR197W THR1P17423 357 aaKnown RBP4.14□□□□□ -1.75
NOP56YLR197W PRP22P24384 1145 aaKnown RBP4.14□□□□□ -1.75
NOP56YLR197W MTH1P35198 433 aa4.14□□□□□ -1.75
NOP56YLR197W COS111P38308 924 aa4.14□□□□□ -1.75
NOP56YLR197W SSB2P40150 613 aaKnown RBP4.14□□□□□ -1.75
NOP56YLR197W VID28P40547 921 aa4.14□□□□□ -1.75
NOP56YLR197W RFX1P48743 811 aa4.14□□□□□ -1.75
NOP56YLR197W YFT2Q06676 274 aa4.14□□□□□ -1.75
NOP56YLR197W TRE2Q08693 809 aa4.14□□□□□ -1.75
NOP56YLR197W CHS5Q12114 671 aaKnown RBP4.14□□□□□ -1.75
NOP56YLR197W RPS9BP05755 195 aaKnown RBP4.13□□□□□ -1.75
NOP56YLR197W CDC26P14724 124 aa4.13□□□□□ -1.75
NOP56YLR197W AEP2P22136 580 aa4.13□□□□□ -1.75
NOP56YLR197W UBS1P38290 277 aa4.13□□□□□ -1.75
NOP56YLR197W PAF1P38351 445 aa4.13□□□□□ -1.75
NOP56YLR197W NDC80P40460 691 aa4.13□□□□□ -1.75
NOP56YLR197W NIT2P47016 307 aa4.13□□□□□ -1.75
NOP56YLR197W CTR1P49573 406 aa4.13□□□□□ -1.75
NOP56YLR197W ATG4P53867 494 aa4.13□□□□□ -1.75
NOP56YLR197W SKY1Q03656 742 aa4.13□□□□□ -1.75
NOP56YLR197W ATP12P22135 325 aa4.12□□□□□ -1.75
NOP56YLR197W SER1P33330 395 aaKnown RBP4.12□□□□□ -1.75
NOP56YLR197W ARG2P40360 574 aa4.12□□□□□ -1.75
NOP56YLR197W TAF4P50105 388 aa4.12□□□□□ -1.75
NOP56YLR197W FOL1P53848 824 aa4.12□□□□□ -1.75
NOP56YLR197W COG6P53959 839 aa4.12□□□□□ -1.75
NOP56YLR197W PPN1Q04119 674 aa4.12□□□□□ -1.75
NOP56YLR197W IRC10Q08118 586 aa4.12□□□□□ -1.75
NOP56YLR197W YPR027CQ12079 277 aa4.12□□□□□ -1.75
NOP56YLR197W MRH1Q12117 320 aaPredicted RBP4.12□□□□□ -1.75
NOP56YLR197W USV1Q12132 391 aa4.12□□□□□ -1.75
NOP56YLR197W NOP56Q12460 504 aaKnown RBP RIP-Chip data4.12□□□□□ -1.75not detected
NOP56YLR197W MRC1P25588 1096 aa4.11□□□□□ -1.75
NOP56YLR197W PRE4P30657 266 aa4.11□□□□□ -1.75
NOP56YLR197W DGR2P32330 852 aa4.11□□□□□ -1.75
NOP56YLR197W MF(ALPHA)2P32435 120 aa4.11□□□□□ -1.75
NOP56YLR197W MSS1P32559 526 aaPredicted RBP4.11□□□□□ -1.75
NOP56YLR197W KHA1P40309 873 aa4.11□□□□□ -1.75
NOP56YLR197W MPS3P47069 682 aa4.11□□□□□ -1.75
NOP56YLR197W RNR4P49723 345 aaKnown RBP4.11□□□□□ -1.75
NOP56YLR197W NSE5Q03718 556 aa4.11□□□□□ -1.75
NOP56YLR197W CDC43P18898 376 aa4.11□□□□□ -1.75
NOP56YLR197W ACO1P19414 778 aaKnown RBP RIP-Chip data4.11□□□□□ -1.75not detected
NOP56YLR197W KIN3P22209 435 aa4.11□□□□□ -1.75
NOP56YLR197W SET3P36124 751 aa4.11□□□□□ -1.75
NOP56YLR197W GLG1P36143 616 aa4.11□□□□□ -1.75
NOP56YLR197W CTP1P38152 299 aa4.11□□□□□ -1.75
NOP56YLR197W ENP1P38333 483 aaKnown RBP4.11□□□□□ -1.75
NOP56YLR197W YHR097CP38809 366 aaKnown RBP4.11□□□□□ -1.75
NOP56YLR197W SPC105P53148 917 aa4.11□□□□□ -1.75
NOP56YLR197W YGR151CP53287 111 aa4.11□□□□□ -1.75
NOP56YLR197W YDL086WQ07505 273 aa4.11□□□□□ -1.75
NOP56YLR197W ABF1P14164 731 aa4.1□□□□□ -1.75
NOP56YLR197W FUB1P25659 250 aa4.1□□□□□ -1.75
NOP56YLR197W YHR033WP38690 423 aa4.1□□□□□ -1.75
NOP56YLR197W YJL206CP39529 758 aa4.1□□□□□ -1.75
NOP56YLR197W CCT7P42943 550 aaKnown RBP4.1□□□□□ -1.75
NOP56YLR197W ENP2P48234 707 aaKnown RBP4.1□□□□□ -1.75
NOP56YLR197W SPO1P53541 631 aa4.1□□□□□ -1.75
NOP56YLR197W NGL1Q08213 363 aaKnown RBP4.1□□□□□ -1.75
NOP56YLR197W MSL5Q12186 476 aaKnown RBP RIP-Chip data4.1□□□□□ -1.75not detected
NOP56YLR197W TAF3Q12297 353 aa4.1□□□□□ -1.75
NOP56YLR197W NTH1P32356 751 aa4.09□□□□□ -1.75
NOP56YLR197W HXT4P32467 576 aa4.09□□□□□ -1.75
NOP56YLR197W CDS1P38221 457 aa4.09□□□□□ -1.75
NOP56YLR197W QRI1P43123 477 aaKnown RBP4.09□□□□□ -1.75
NOP56YLR197W STU2P46675 888 aa4.09□□□□□ -1.75
NOP56YLR197W SLD3P53135 668 aa4.09□□□□□ -1.75
NOP56YLR197W COX11P19516 300 aaKnown RBP4.08□□□□□ -1.76
NOP56YLR197W HCA4P20448 770 aaKnown RBP4.08□□□□□ -1.76
NOP56YLR197W HEM12P32347 362 aaPredicted RBP4.08□□□□□ -1.76
NOP56YLR197W PLC1P32383 869 aa4.08□□□□□ -1.76
NOP56YLR197W KSP1P38691 1029 aaKnown RBP4.08□□□□□ -1.76
NOP56YLR197W CRG1P38892 291 aaRIP-Chip data4.08□□□□□ -1.76not detected
Retrieved 100 of 5,963 RNA–protein pairs in 19.1 ms