RNA–Protein interactions for RNA: YIL138C

TPM2, Transcript of Minor isoform of tropomyosin, yeastyeast

Gene TPM2, Length 486 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TPM2YIL138C VBA3P25594 458 aa3.56□□□□□ -1.84
TPM2YIL138C KHA1P40309 873 aa3.56□□□□□ -1.84
TPM2YIL138C BPL1P48445 690 aaPredicted RBP3.56□□□□□ -1.84
TPM2YIL138C NMA2P53204 395 aa3.56□□□□□ -1.84
TPM2YIL138C NGL2Q03264 515 aaKnown RBP3.56□□□□□ -1.84
TPM2YIL138C YDR179W-AQ03983 463 aa3.56□□□□□ -1.84
TPM2YIL138C HOT13P36078 116 aa3.55□□□□□ -1.84
TPM2YIL138C YNL195CP40168 261 aa3.55□□□□□ -1.84
TPM2YIL138C ARP4P80428 489 aa3.55□□□□□ -1.84
TPM2YIL138C UFO1Q04511 668 aa3.55□□□□□ -1.84
TPM2YIL138C COG8Q04632 607 aa3.55□□□□□ -1.84
TPM2YIL138C POM34Q12445 299 aa3.55□□□□□ -1.84
TPM2YIL138C AIM44Q99299 758 aa3.55□□□□□ -1.84
TPM2YIL138C ERG20P08524 352 aaKnown RBP3.54□□□□□ -1.84
TPM2YIL138C PSA1P41940 361 aaKnown RBP3.54□□□□□ -1.84
TPM2YIL138C ATG36P46983 293 aa3.54□□□□□ -1.84
TPM2YIL138C RFX1P48743 811 aa3.54□□□□□ -1.84
TPM2YIL138C STP1Q00947 519 aa3.54□□□□□ -1.84
TPM2YIL138C LEE1Q02799 301 aaKnown RBP3.54□□□□□ -1.84
TPM2YIL138C ORM2Q06144 216 aa3.54□□□□□ -1.84
TPM2YIL138C FPR4Q06205 392 aaPredicted RBP3.54□□□□□ -1.84
TPM2YIL138C IRC3Q06683 689 aa3.54□□□□□ -1.84
TPM2YIL138C CIR2Q08822 631 aa3.54□□□□□ -1.84
TPM2YIL138C SEC15P22224 910 aa3.53□□□□□ -1.84
TPM2YIL138C SSZ1P38788 538 aaKnown RBP3.53□□□□□ -1.84
TPM2YIL138C DOT6P40059 670 aaKnown RBP3.53□□□□□ -1.84
TPM2YIL138C YIL077CP40508 320 aa3.53□□□□□ -1.84
TPM2YIL138C OSW7P43611 510 aa3.53□□□□□ -1.84
TPM2YIL138C BRE5P53741 515 aaKnown RBP3.53□□□□□ -1.84
TPM2YIL138C DAK1P54838 584 aaKnown RBP3.53□□□□□ -1.84
TPM2YIL138C YPL068CQ02749 293 aa3.53□□□□□ -1.84
TPM2YIL138C SRD1P09007 221 aa3.52□□□□□ -1.85
TPM2YIL138C ERR1P0CX10 437 aa3.52□□□□□ -1.85
TPM2YIL138C ERR2P0CX11 437 aa3.52□□□□□ -1.85
TPM2YIL138C KIN82P25341 720 aa3.52□□□□□ -1.85
TPM2YIL138C MSS1P32559 526 aaPredicted RBP3.52□□□□□ -1.85
TPM2YIL138C YEL1P34225 687 aa3.52□□□□□ -1.85
TPM2YIL138C PBP2P38151 413 aaKnown RBP RIP-Chip data3.52□□□□□ -1.85not detected
TPM2YIL138C DIP5P53388 608 aa3.52□□□□□ -1.85
TPM2YIL138C CPR8P53728 308 aa3.52□□□□□ -1.85
TPM2YIL138C GPD1Q00055 391 aaKnown RBP3.52□□□□□ -1.85
TPM2YIL138C ARG7Q04728 441 aa3.52□□□□□ -1.85
TPM2YIL138C YFT2Q06676 274 aa3.52□□□□□ -1.85
TPM2YIL138C ISA1Q07821 250 aaPredicted RBP3.52□□□□□ -1.85
TPM2YIL138C AKL1P38080 1108 aaKnown RBP3.51□□□□□ -1.85
TPM2YIL138C COS111P38308 924 aa3.51□□□□□ -1.85
TPM2YIL138C DSS1P39112 969 aa3.51□□□□□ -1.85
TPM2YIL138C YJR039WP47107 1121 aa3.51□□□□□ -1.85
TPM2YIL138C YGL117WP53133 265 aa3.51□□□□□ -1.85
TPM2YIL138C SNF12P53628 566 aa3.51□□□□□ -1.85
TPM2YIL138C RPN4Q03465 531 aa3.51□□□□□ -1.85
TPM2YIL138C AI5_ALPHAQ9ZZX1 630 aa3.51□□□□□ -1.85
TPM2YIL138C AAD3P25612 363 aa3.5□□□□□ -1.85
TPM2YIL138C YPT7P32939 208 aa3.5□□□□□ -1.85
TPM2YIL138C MNN4P36044 1178 aa3.5□□□□□ -1.85
TPM2YIL138C IZH3Q07959 543 aa3.5□□□□□ -1.85
TPM2YIL138C PET127P32606 800 aa3.49□□□□□ -1.85
TPM2YIL138C PPG1P32838 368 aa3.49□□□□□ -1.85
TPM2YIL138C RGT1P32862 1170 aa3.49□□□□□ -1.85
TPM2YIL138C TIM23P32897 222 aa3.49□□□□□ -1.85
TPM2YIL138C THI6P41835 540 aa3.49□□□□□ -1.85
TPM2YIL138C BIT61P47041 543 aa3.49□□□□□ -1.85
TPM2YIL138C RNH70P53331 553 aa3.49□□□□□ -1.85
TPM2YIL138C TDA9Q04545 1251 aa3.49□□□□□ -1.85
TPM2YIL138C VPS36Q06696 566 aa3.49□□□□□ -1.85
TPM2YIL138C GEP3Q08622 556 aa3.49□□□□□ -1.85
TPM2YIL138C FRS1P15624 595 aaKnown RBP3.48□□□□□ -1.85
TPM2YIL138C MEF1P25039 761 aa3.48□□□□□ -1.85
TPM2YIL138C YHR202WP38887 602 aa3.48□□□□□ -1.85
TPM2YIL138C NUP82P40368 713 aa3.48□□□□□ -1.85
TPM2YIL138C PIP2P52960 996 aa3.48□□□□□ -1.85
TPM2YIL138C VBA4Q04602 768 aaKnown RBP3.48□□□□□ -1.85
TPM2YIL138C ATG33Q06485 197 aa3.48□□□□□ -1.85
TPM2YIL138C VHS3Q08438 674 aa3.48□□□□□ -1.85
TPM2YIL138C RPS9BP05755 195 aaKnown RBP3.47□□□□□ -1.85
TPM2YIL138C STE4P18851 423 aa3.47□□□□□ -1.85
TPM2YIL138C PRP22P24384 1145 aaKnown RBP3.47□□□□□ -1.85
TPM2YIL138C BEM3P32873 1128 aa3.47□□□□□ -1.85
TPM2YIL138C ELF1P36053 145 aa3.47□□□□□ -1.85
TPM2YIL138C PIH1P38768 344 aa3.47□□□□□ -1.85
TPM2YIL138C BUD6P41697 788 aa3.47□□□□□ -1.85
TPM2YIL138C MEP2P41948 499 aa3.47□□□□□ -1.85
TPM2YIL138C UGO1Q03327 502 aa3.47□□□□□ -1.85
TPM2YIL138C DCS2Q12123 353 aa3.47□□□□□ -1.85
TPM2YIL138C PHO8P11491 566 aa3.46□□□□□ -1.86
TPM2YIL138C TUP1P16649 713 aa3.46□□□□□ -1.86
TPM2YIL138C PMA2P19657 947 aa3.46□□□□□ -1.86
TPM2YIL138C TSR4P25040 408 aa3.46□□□□□ -1.86
TPM2YIL138C EUG1P32474 517 aa3.46□□□□□ -1.86
TPM2YIL138C MAL31P38156 614 aa3.46□□□□□ -1.86
TPM2YIL138C RIM4P38741 713 aa3.46□□□□□ -1.86
TPM2YIL138C NMD2P38798 1089 aaKnown RBP3.46□□□□□ -1.86
TPM2YIL138C ATP23P53722 227 aa3.46□□□□□ -1.86
TPM2YIL138C YLR125WQ12138 136 aa3.46□□□□□ -1.86
TPM2YIL138C GIN4Q12263 1142 aa3.46□□□□□ -1.86
TPM2YIL138C ZPS1Q12512 249 aa3.46□□□□□ -1.86
TPM2YIL138C LEU2P04173 364 aaPredicted RBP3.45□□□□□ -1.86
TPM2YIL138C HMG1P12683 1054 aa3.45□□□□□ -1.86
TPM2YIL138C PCL2P25693 308 aa3.45□□□□□ -1.86
TPM2YIL138C MSH2P25847 964 aa3.45□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 29.3 ms