RNA–Protein interactions for RNA: YHR150W

PEX28, Transcript of Peroxisomal integral membrane peroxin, yeastyeast

Gene PEX28, Length 1,740 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX28YHR150W REV7P38927 245 aa7.85□□□□□ -1.15
PEX28YHR150W TMN3P40071 706 aa7.85□□□□□ -1.15
PEX28YHR150W TFG1P41895 735 aaPredicted RBP7.85□□□□□ -1.15
PEX28YHR150W ERP6P53198 216 aa7.85□□□□□ -1.15
PEX28YHR150W TRS130Q03660 1102 aa7.85□□□□□ -1.15
PEX28YHR150W IVY1Q04934 453 aa7.85□□□□□ -1.15
PEX28YHR150W CST9Q06032 482 aa7.85□□□□□ -1.15
PEX28YHR150W TDA5Q06417 326 aaKnown RBP7.85□□□□□ -1.15
PEX28YHR150W VHS3Q08438 674 aa7.85□□□□□ -1.15
PEX28YHR150W BI2P03873 423 aa7.84□□□□□ -1.15
PEX28YHR150W BI4P03879 638 aa7.84□□□□□ -1.15
PEX28YHR150W ADE3P07245 946 aaKnown RBP7.84□□□□□ -1.15
PEX28YHR150W TUB3P09734 445 aaKnown RBP7.84□□□□□ -1.15
PEX28YHR150W RRT12P25381 491 aa7.84□□□□□ -1.15
PEX28YHR150W FLR1P38124 548 aa7.84□□□□□ -1.15
PEX28YHR150W SPC97P38863 823 aa7.84□□□□□ -1.15
PEX28YHR150W PMC1P38929 1173 aaPredicted RBP7.84□□□□□ -1.15
PEX28YHR150W OAF1P39720 1047 aaPredicted RBP7.84□□□□□ -1.15
PEX28YHR150W AXL1P40851 1208 aa7.84□□□□□ -1.15
PEX28YHR150W SCS3P53012 380 aa7.84□□□□□ -1.15
PEX28YHR150W ABP140Q08641 628 aaKnown RBP7.84□□□□□ -1.15
PEX28YHR150W MET7Q08645 548 aa7.84□□□□□ -1.15
PEX28YHR150W HFI1Q12060 488 aa7.84□□□□□ -1.15
PEX28YHR150W BI3Q9ZZW7 517 aa7.84□□□□□ -1.15
PEX28YHR150W AI5_BETAQ9ZZX0 354 aa7.84□□□□□ -1.15
PEX28YHR150W RPS3P05750 240 aaKnown RBP7.83□□□□□ -1.16
PEX28YHR150W REC107P21651 314 aa7.83□□□□□ -1.16
PEX28YHR150W BUD14P27637 709 aa7.83□□□□□ -1.16
PEX28YHR150W KIP2P28743 706 aa7.83□□□□□ -1.16
PEX28YHR150W DPH2P32461 534 aa7.83□□□□□ -1.16
PEX28YHR150W MRE11P32829 692 aa7.83□□□□□ -1.16
PEX28YHR150W SKG6P32900 734 aaPredicted RBP7.83□□□□□ -1.16
PEX28YHR150W MMS4P38257 691 aa7.83□□□□□ -1.16
PEX28YHR150W PCA1P38360 1216 aa7.83□□□□□ -1.16
PEX28YHR150W APM2P38700 605 aa7.83□□□□□ -1.16
PEX28YHR150W LIN1P38852 340 aaPredicted RBP7.83□□□□□ -1.16
PEX28YHR150W RGD2P43556 714 aa7.83□□□□□ -1.16
PEX28YHR150W TAF6P53040 516 aa7.83□□□□□ -1.16
PEX28YHR150W CDC24P11433 854 aaPredicted RBP7.83□□□□□ -1.16
PEX28YHR150W POX1P13711 748 aa7.83□□□□□ -1.16
PEX28YHR150W SCJ1P25303 377 aa7.83□□□□□ -1.16
PEX28YHR150W KAR4P25583 335 aa7.83□□□□□ -1.16
PEX28YHR150W ABD1P32783 436 aaPredicted RBP7.83□□□□□ -1.16
PEX28YHR150W SMF2P38778 549 aa7.83□□□□□ -1.16
PEX28YHR150W STN1P38960 494 aa7.83□□□□□ -1.16
PEX28YHR150W JJJ3P47138 172 aa7.83□□□□□ -1.16
PEX28YHR150W YDR018CQ12185 396 aa7.83□□□□□ -1.16
PEX28YHR150W ZPS1Q12512 249 aa7.83□□□□□ -1.16
PEX28YHR150W ECM3Q99252 613 aa7.83□□□□□ -1.16
PEX28YHR150W WHI2P12611 486 aa7.82□□□□□ -1.16
PEX28YHR150W GCD2P12754 651 aaPredicted RBP7.82□□□□□ -1.16
PEX28YHR150W KIN82P25341 720 aa7.82□□□□□ -1.16
PEX28YHR150W RPC19P28000 142 aaKnown RBP7.82□□□□□ -1.16
PEX28YHR150W RME1P32338 300 aaKnown RBP7.82□□□□□ -1.16
PEX28YHR150W YME2P32843 850 aa7.82□□□□□ -1.16
PEX28YHR150W KHA1P40309 873 aa7.82□□□□□ -1.16
PEX28YHR150W PFK26P40433 827 aaKnown RBP7.82□□□□□ -1.16
PEX28YHR150W ALY2P47029 1046 aa7.82□□□□□ -1.16
PEX28YHR150W KTR5P53966 522 aaPredicted RBP7.82□□□□□ -1.16
PEX28YHR150W UBP2Q01476 1272 aa7.82□□□□□ -1.16
PEX28YHR150W CUS1Q02554 436 aaPredicted RBP7.82□□□□□ -1.16
PEX28YHR150W CWC21Q03375 135 aaKnown RBP7.82□□□□□ -1.16
PEX28YHR150W ERV41Q04651 352 aa7.82□□□□□ -1.16
PEX28YHR150W PRM6Q04705 352 aa7.82□□□□□ -1.16
PEX28YHR150W YLR455WQ06188 304 aa7.82□□□□□ -1.16
PEX28YHR150W YPT6Q99260 215 aa7.82□□□□□ -1.16
PEX28YHR150W RPL4AP10664 362 aaKnown RBP7.81□□□□□ -1.16
PEX28YHR150W SPT5P27692 1063 aaKnown RBP7.81□□□□□ -1.16
PEX28YHR150W PRR1P28708 518 aa7.81□□□□□ -1.16
PEX28YHR150W TMT1P32643 299 aa7.81□□□□□ -1.16
PEX28YHR150W TOA1P32773 286 aa7.81□□□□□ -1.16
PEX28YHR150W GPT2P36148 743 aa7.81□□□□□ -1.16
PEX28YHR150W RFC3P38629 340 aa7.81□□□□□ -1.16
PEX28YHR150W KSP1P38691 1029 aaKnown RBP7.81□□□□□ -1.16
PEX28YHR150W MXR1P40029 184 aa7.81□□□□□ -1.16
PEX28YHR150W YIL001WP40560 513 aa7.81□□□□□ -1.16
PEX28YHR150W MDJ2P42834 146 aa7.81□□□□□ -1.16
PEX28YHR150W SAD1P43589 448 aa7.81□□□□□ -1.16
PEX28YHR150W RPL4BP49626 362 aaKnown RBP7.81□□□□□ -1.16
PEX28YHR150W PCL10P53124 433 aa7.81□□□□□ -1.16
PEX28YHR150W MNP1P53163 194 aaPredicted RBP7.81□□□□□ -1.16
PEX28YHR150W LGE1Q02796 332 aaKnown RBP7.81□□□□□ -1.16
PEX28YHR150W ATP25Q03153 612 aa7.81□□□□□ -1.16
PEX28YHR150W GTB1Q04924 702 aa7.81□□□□□ -1.16
PEX28YHR150W ECM7Q06200 448 aa7.81□□□□□ -1.16
PEX28YHR150W CDC73Q06697 393 aa7.81□□□□□ -1.16
PEX28YHR150W YLR053CQ12026 108 aa7.81□□□□□ -1.16
PEX28YHR150W SSC1P0CS90 654 aaKnown RBP7.81□□□□□ -1.16
PEX28YHR150W ASP3-2P0CX77 362 aa7.81□□□□□ -1.16
PEX28YHR150W ASP3-3P0CX78 362 aa7.81□□□□□ -1.16
PEX28YHR150W ASP3-4P0CX79 362 aa7.81□□□□□ -1.16
PEX28YHR150W ASP3-1P0CZ17 362 aa7.81□□□□□ -1.16
PEX28YHR150W COX11P19516 300 aaKnown RBP7.81□□□□□ -1.16
PEX28YHR150W TRX1P22217 103 aaKnown RBP7.81□□□□□ -1.16
PEX28YHR150W CLB4P24871 460 aa7.81□□□□□ -1.16
PEX28YHR150W AAD3P25612 363 aa7.81□□□□□ -1.16
PEX28YHR150W TIM23P32897 222 aa7.81□□□□□ -1.16
PEX28YHR150W YGL015CP33199 130 aa7.81□□□□□ -1.16
PEX28YHR150W MSR1P38714 643 aa7.81□□□□□ -1.16
PEX28YHR150W YJL045WP47052 634 aa7.81□□□□□ -1.16
Retrieved 100 of 5,963 RNA–protein pairs in 74.7 ms