RNA–Protein interactions for RNA: YHR060W

VMA22, Transcript of Protein that is required for vacuolar H+-ATPase (V-ATPase) function, yeast

Gene VMA22, Length 546 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA22	YHR060W	FCP1	Q03254	732 aa		4.86	□□□□□ -1.63
VMA22	YHR060W	SPN1	Q06505	410 aa	Predicted RBP	4.86	□□□□□ -1.63
VMA22	YHR060W	TAH18	Q12181	623 aa		4.86	□□□□□ -1.63
VMA22	YHR060W	Q0142	Q9ZZW4	58 aa		4.86	□□□□□ -1.63
VMA22	YHR060W	RPS17A	P02407	136 aa	Known RBP	4.85	□□□□□ -1.63
VMA22	YHR060W	HSF1	P10961	833 aa		4.85	□□□□□ -1.63
VMA22	YHR060W	KIN2	P13186	1147 aa	Known RBP	4.85	□□□□□ -1.63
VMA22	YHR060W	GLN4	P13188	809 aa	Known RBP	4.85	□□□□□ -1.63
VMA22	YHR060W	RPS17B	P14127	136 aa	Known RBP	4.85	□□□□□ -1.63
VMA22	YHR060W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.85	□□□□□ -1.63	not detected
VMA22	YHR060W	UBC1	P21734	215 aa	Known RBP	4.85	□□□□□ -1.63
VMA22	YHR060W	NOP4	P37838	685 aa	Known RBP	4.85	□□□□□ -1.63
VMA22	YHR060W	RFC5	P38251	354 aa		4.85	□□□□□ -1.63
VMA22	YHR060W	DUN1	P39009	513 aa		4.85	□□□□□ -1.63
VMA22	YHR060W	MAD3	P47074	515 aa		4.85	□□□□□ -1.63
VMA22	YHR060W	PSP2	P50109	593 aa	Known RBP	4.85	□□□□□ -1.63
VMA22	YHR060W	HFM1	P51979	1187 aa		4.85	□□□□□ -1.63
VMA22	YHR060W	TRI1	Q05024	226 aa		4.85	□□□□□ -1.63
VMA22	YHR060W	CSR1	Q06705	408 aa	Known RBP	4.85	□□□□□ -1.63
VMA22	YHR060W	VPS5	Q92331	675 aa		4.85	□□□□□ -1.63
VMA22	YHR060W	YEL076C-A	P0CX16	216 aa		4.84	□□□□□ -1.63
VMA22	YHR060W	YLR464W	P0CX17	216 aa		4.84	□□□□□ -1.63
VMA22	YHR060W	ADH4	P10127	382 aa		4.84	□□□□□ -1.63
VMA22	YHR060W	MCM3	P24279	971 aa	Known RBP	4.84	□□□□□ -1.63
VMA22	YHR060W	CLB4	P24871	460 aa		4.84	□□□□□ -1.63
VMA22	YHR060W	HXT4	P32467	576 aa		4.84	□□□□□ -1.63
VMA22	YHR060W	LRG1	P35688	1017 aa		4.84	□□□□□ -1.63
VMA22	YHR060W	APN2	P38207	520 aa		4.84	□□□□□ -1.63
VMA22	YHR060W	UBS1	P38290	277 aa		4.84	□□□□□ -1.63
VMA22	YHR060W	MIP6	P38760	659 aa	Known RBP	4.84	□□□□□ -1.63
VMA22	YHR060W	LAM1	P38851	1228 aa		4.84	□□□□□ -1.63
VMA22	YHR060W	SPC72	P39723	622 aa		4.84	□□□□□ -1.63
VMA22	YHR060W	YEL076C	P39971	216 aa		4.84	□□□□□ -1.63
VMA22	YHR060W	EAF5	P39995	279 aa		4.84	□□□□□ -1.63
VMA22	YHR060W	KHA1	P40309	873 aa		4.84	□□□□□ -1.63
VMA22	YHR060W	RIC1	P40395	1056 aa		4.84	□□□□□ -1.63
VMA22	YHR060W	YIL108W	P40483	696 aa	Known RBP	4.84	□□□□□ -1.63
VMA22	YHR060W	VHR1	P40522	640 aa		4.84	□□□□□ -1.63
VMA22	YHR060W	ARC35	P53731	342 aa	Known RBP	4.84	□□□□□ -1.63
VMA22	YHR060W	DUS1	P53759	423 aa	Known RBP	4.84	□□□□□ -1.63
VMA22	YHR060W	MRPL19	P53875	158 aa		4.84	□□□□□ -1.63
VMA22	YHR060W	CBK1	P53894	756 aa		4.84	□□□□□ -1.63
VMA22	YHR060W	RSM24	Q03976	319 aa		4.84	□□□□□ -1.63
VMA22	YHR060W	VID22	Q05934	901 aa		4.84	□□□□□ -1.63
VMA22	YHR060W	YLR407W	Q06070	228 aa		4.84	□□□□□ -1.63
VMA22	YHR060W	MCH5	Q08777	521 aa		4.84	□□□□□ -1.63
VMA22	YHR060W	YOR352W	Q08816	343 aa		4.84	□□□□□ -1.63
VMA22	YHR060W	HAL9	Q12180	1030 aa		4.84	□□□□□ -1.63
VMA22	YHR060W	SFI1	Q12369	946 aa		4.84	□□□□□ -1.63
VMA22	YHR060W	FUM1	P08417	488 aa	Known RBP	4.83	□□□□□ -1.64
VMA22	YHR060W	AAC3	P18238	307 aa		4.83	□□□□□ -1.64
VMA22	YHR060W	CBP3	P21560	335 aa		4.83	□□□□□ -1.64
VMA22	YHR060W	VMA8	P32610	256 aa	Known RBP	4.83	□□□□□ -1.64
VMA22	YHR060W	TEF4	P36008	412 aa	Known RBP	4.83	□□□□□ -1.64
VMA22	YHR060W	MUD2	P36084	527 aa	Known RBP	4.83	□□□□□ -1.64
VMA22	YHR060W	CCT3	P39077	534 aa	Known RBP	4.83	□□□□□ -1.64
VMA22	YHR060W	YEL068C	P39977	110 aa		4.83	□□□□□ -1.64
VMA22	YHR060W	PUG1	P40100	303 aa		4.83	□□□□□ -1.64
VMA22	YHR060W	PRM2	P40534	656 aa		4.83	□□□□□ -1.64
VMA22	YHR060W	SET2	P46995	733 aa	Known RBP	4.83	□□□□□ -1.64
VMA22	YHR060W	BNA1	P47096	177 aa		4.83	□□□□□ -1.64
VMA22	YHR060W	EXG2	P52911	562 aa		4.83	□□□□□ -1.64
VMA22	YHR060W	RSC1	P53236	928 aa		4.83	□□□□□ -1.64
VMA22	YHR060W	SNO2	P53823	222 aa		4.83	□□□□□ -1.64
VMA22	YHR060W	MEH1	Q02205	184 aa		4.83	□□□□□ -1.64
VMA22	YHR060W	ERO1	Q03103	563 aa		4.83	□□□□□ -1.64
VMA22	YHR060W	ARA2	Q04212	335 aa		4.83	□□□□□ -1.64
VMA22	YHR060W	TDA9	Q04545	1251 aa		4.83	□□□□□ -1.64
VMA22	YHR060W	IWR1	Q07532	353 aa	Predicted RBP	4.83	□□□□□ -1.64
VMA22	YHR060W	NBP2	Q12163	236 aa		4.83	□□□□□ -1.64
VMA22	YHR060W	HSH49	Q99181	213 aa	Predicted RBP	4.83	□□□□□ -1.64
VMA22	YHR060W	SNF1	P06782	633 aa	Known RBP	4.82	□□□□□ -1.64
VMA22	YHR060W	HOM3	P10869	527 aa		4.82	□□□□□ -1.64
VMA22	YHR060W	CDC26	P14724	124 aa		4.82	□□□□□ -1.64
VMA22	YHR060W	MF(ALPHA)2	P32435	120 aa		4.82	□□□□□ -1.64
VMA22	YHR060W	NPL6	P32832	435 aa		4.82	□□□□□ -1.64
VMA22	YHR060W	CNS1	P33313	385 aa		4.82	□□□□□ -1.64
VMA22	YHR060W	ATG19	P35193	415 aa		4.82	□□□□□ -1.64
VMA22	YHR060W	AKL1	P38080	1108 aa	Known RBP	4.82	□□□□□ -1.64
VMA22	YHR060W	MUM2	P38236	366 aa		4.82	□□□□□ -1.64
VMA22	YHR060W	UTP9	P38882	575 aa	Known RBP	4.82	□□□□□ -1.64
VMA22	YHR060W	STT3	P39007	718 aa	Known RBP	4.82	□□□□□ -1.64
VMA22	YHR060W	YER010C	P40011	234 aa		4.82	□□□□□ -1.64
VMA22	YHR060W	ARF3	P40994	183 aa	RIP-Chip data	4.82	□□□□□ -1.64	not detected
VMA22	YHR060W	IRC6	P43615	237 aa		4.82	□□□□□ -1.64
VMA22	YHR060W	MTR3	P48240	250 aa	Predicted RBP	4.82	□□□□□ -1.64
VMA22	YHR060W	UPF3	P48412	387 aa	Known RBP	4.82	□□□□□ -1.64
VMA22	YHR060W	CTF18	P49956	741 aa		4.82	□□□□□ -1.64
VMA22	YHR060W	PRP43	P53131	767 aa	Known RBP	4.82	□□□□□ -1.64
VMA22	YHR060W	YBP2	P53169	641 aa		4.82	□□□□□ -1.64
VMA22	YHR060W	BRE5	P53741	515 aa	Known RBP	4.82	□□□□□ -1.64
VMA22	YHR060W	NSE5	Q03718	556 aa		4.82	□□□□□ -1.64
VMA22	YHR060W	PPN1	Q04119	674 aa		4.82	□□□□□ -1.64
VMA22	YHR060W	ZRT2	Q12436	422 aa		4.82	□□□□□ -1.64
VMA22	YHR060W	RPP2A	P05319	106 aa	Known RBP	4.81	□□□□□ -1.64
VMA22	YHR060W	CDC16	P09798	840 aa		4.81	□□□□□ -1.64
VMA22	YHR060W	POL3	P15436	1097 aa		4.81	□□□□□ -1.64
VMA22	YHR060W	SIR1	P21691	654 aa		4.81	□□□□□ -1.64
VMA22	YHR060W	RKM3	P38222	552 aa		4.81	□□□□□ -1.64
VMA22	YHR060W	SRP72	P38688	640 aa	Known RBP	4.81	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 34.2 ms