RNA–Protein interactions for RNA: YGR261C

APL6, Transcript of Beta3-like subunit of the yeast AP-3 complex, yeast

Gene APL6, Length 2,430 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APL6	YGR261C	HEM1	P09950	548 aa	Predicted RBP	5.19	□□□□□ -1.58
APL6	YGR261C	OCA4	P25366	362 aa		5.19	□□□□□ -1.58
APL6	YGR261C	PRD1	P25375	712 aa		5.19	□□□□□ -1.58
APL6	YGR261C	CWH43	P25618	953 aa		5.19	□□□□□ -1.58
APL6	YGR261C	DOM34	P33309	386 aa		5.19	□□□□□ -1.58
APL6	YGR261C	MSN4	P33749	630 aa		5.19	□□□□□ -1.58
APL6	YGR261C	MCD4	P36051	919 aa		5.19	□□□□□ -1.58
APL6	YGR261C	DID4	P36108	232 aa		5.19	□□□□□ -1.58
APL6	YGR261C	MRPL40	P36534	297 aa		5.19	□□□□□ -1.58
APL6	YGR261C	NTC20	P38302	140 aa	Predicted RBP	5.19	□□□□□ -1.58
APL6	YGR261C	YBR197C	P38306	217 aa		5.19	□□□□□ -1.58
APL6	YGR261C	MNL1	P38888	796 aa		5.19	□□□□□ -1.58
APL6	YGR261C	AXL2	P38928	823 aa		5.19	□□□□□ -1.58
APL6	YGR261C	CCC2	P38995	1004 aa		5.19	□□□□□ -1.58
APL6	YGR261C	DUN1	P39009	513 aa		5.19	□□□□□ -1.58
APL6	YGR261C	DSS1	P39112	969 aa		5.19	□□□□□ -1.58
APL6	YGR261C	YJR061W	P40355	935 aa		5.19	□□□□□ -1.58
APL6	YGR261C	FIG4	P42837	879 aa		5.19	□□□□□ -1.58
APL6	YGR261C	ASE1	P50275	885 aa		5.19	□□□□□ -1.58
APL6	YGR261C	ZIP2	P53061	704 aa		5.19	□□□□□ -1.58
APL6	YGR261C	YGR273C	P53329	174 aa		5.19	□□□□□ -1.58
APL6	YGR261C	YAP6	Q03935	383 aa		5.19	□□□□□ -1.58
APL6	YGR261C	DAL4	Q04895	635 aa		5.19	□□□□□ -1.58
APL6	YGR261C	PRP19	P32523	503 aa	Known RBP	5.18	□□□□□ -1.58
APL6	YGR261C	YKR018C	P36114	725 aa		5.18	□□□□□ -1.58
APL6	YGR261C	SMF2	P38778	549 aa		5.18	□□□□□ -1.58
APL6	YGR261C	LIA1	P47120	325 aa	Known RBP	5.18	□□□□□ -1.58
APL6	YGR261C	HSH155	P49955	971 aa	Known RBP	5.18	□□□□□ -1.58
APL6	YGR261C	UBP15	P50101	1230 aa		5.18	□□□□□ -1.58
APL6	YGR261C	SGF73	P53165	657 aa		5.18	□□□□□ -1.58
APL6	YGR261C	PIB2	P53191	635 aa		5.18	□□□□□ -1.58
APL6	YGR261C	ARC35	P53731	342 aa	Known RBP	5.18	□□□□□ -1.58
APL6	YGR261C	CNM67	P53865	581 aa	Known RBP	5.18	□□□□□ -1.58
APL6	YGR261C	EOS1	P53938	366 aa		5.18	□□□□□ -1.58
APL6	YGR261C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	5.18	□□□□□ -1.58	not detected
APL6	YGR261C	YDL124W	Q07551	312 aa	Known RBP	5.18	□□□□□ -1.58
APL6	YGR261C	GRE2	Q12068	342 aa	Known RBP	5.18	□□□□□ -1.58
APL6	YGR261C	CFT1	Q06632	1357 aa	Known RBP	5.18	□□□□□ -1.58
APL6	YGR261C	SNF1	P06782	633 aa	Known RBP	5.18	□□□□□ -1.58
APL6	YGR261C	PRB1	P09232	635 aa		5.18	□□□□□ -1.58
APL6	YGR261C	OLE1	P21147	510 aa	Known RBP	5.18	□□□□□ -1.58
APL6	YGR261C	ADE2	P21264	571 aa	Known RBP	5.18	□□□□□ -1.58
APL6	YGR261C	ADK2	P26364	225 aa		5.18	□□□□□ -1.58
APL6	YGR261C	URA7	P28274	579 aa	Known RBP	5.18	□□□□□ -1.58
APL6	YGR261C	PAP1	P29468	568 aa	Known RBP	5.18	□□□□□ -1.58
APL6	YGR261C	MEI5	P32489	222 aa		5.18	□□□□□ -1.58
APL6	YGR261C	BPL1	P48445	690 aa	Predicted RBP	5.18	□□□□□ -1.58
APL6	YGR261C	MRPS17	Q03246	237 aa	Predicted RBP	5.18	□□□□□ -1.58
APL6	YGR261C	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	5.18	□□□□□ -1.58	RIP-Chip
APL6	YGR261C	VPS54	Q12071	889 aa		5.18	□□□□□ -1.58
APL6	YGR261C	RTN2	Q12443	393 aa		5.18	□□□□□ -1.58
APL6	YGR261C	RMP1	Q12530	201 aa		5.18	□□□□□ -1.58
APL6	YGR261C	SKI3	P17883	1432 aa	Known RBP	5.17	□□□□□ -1.58
APL6	YGR261C	ARG80	P07249	177 aa		5.17	□□□□□ -1.58
APL6	YGR261C	APE1	P14904	514 aa		5.17	□□□□□ -1.58
APL6	YGR261C	PWP1	P21304	576 aa	Known RBP	5.17	□□□□□ -1.58
APL6	YGR261C	SLY41	P22215	453 aa		5.17	□□□□□ -1.58
APL6	YGR261C	SBA1	P28707	216 aa	Known RBP	5.17	□□□□□ -1.58
APL6	YGR261C	ABD1	P32783	436 aa	Predicted RBP	5.17	□□□□□ -1.58
APL6	YGR261C	XRS2	P33301	854 aa		5.17	□□□□□ -1.58
APL6	YGR261C	TIF3	P34167	436 aa	Known RBP	5.17	□□□□□ -1.58
APL6	YGR261C	ARL1	P38116	183 aa	Known RBP	5.17	□□□□□ -1.58
APL6	YGR261C	CKB2	P38930	258 aa		5.17	□□□□□ -1.58
APL6	YGR261C	YDR089W	P38966	869 aa		5.17	□□□□□ -1.58
APL6	YGR261C	XDJ1	P39102	459 aa		5.17	□□□□□ -1.58
APL6	YGR261C	CCT5	P40413	562 aa	Known RBP	5.17	□□□□□ -1.58
APL6	YGR261C	ARF3	P40994	183 aa	RIP-Chip data	5.17	□□□□□ -1.58	not detected
APL6	YGR261C	GZF3	P42944	551 aa	Known RBP	5.17	□□□□□ -1.58
APL6	YGR261C	ALR2	P43553	858 aa		5.17	□□□□□ -1.58
APL6	YGR261C	CGR1	P53188	120 aa		5.17	□□□□□ -1.58
APL6	YGR261C	MNT4	P53745	580 aa		5.17	□□□□□ -1.58
APL6	YGR261C	YPL109C	Q02981	657 aa		5.17	□□□□□ -1.58
APL6	YGR261C	IVY1	Q04934	453 aa		5.17	□□□□□ -1.58
APL6	YGR261C	SPH1	Q06160	661 aa		5.17	□□□□□ -1.58
APL6	YGR261C	TFC6	Q06339	672 aa		5.17	□□□□□ -1.58
APL6	YGR261C	TLG2	Q08144	397 aa		5.17	□□□□□ -1.58
APL6	YGR261C	TDH1	P00360	332 aa	Known RBP	5.17	□□□□□ -1.58
APL6	YGR261C	FBP1	P09201	348 aa		5.17	□□□□□ -1.58
APL6	YGR261C	TRK1	P12685	1235 aa		5.17	□□□□□ -1.58
APL6	YGR261C	RAD53	P22216	821 aa		5.17	□□□□□ -1.58
APL6	YGR261C	SLA1	P32790	1244 aa		5.17	□□□□□ -1.58
APL6	YGR261C	ALG14	P38242	237 aa		5.17	□□□□□ -1.58
APL6	YGR261C	APD1	P38281	316 aa		5.17	□□□□□ -1.58
APL6	YGR261C	SOH1	P38633	127 aa		5.17	□□□□□ -1.58
APL6	YGR261C	SSZ1	P38788	538 aa	Known RBP	5.17	□□□□□ -1.58
APL6	YGR261C	RGA1	P39083	1007 aa		5.17	□□□□□ -1.58
APL6	YGR261C	ATF1	P40353	525 aa		5.17	□□□□□ -1.58
APL6	YGR261C	MND2	P40577	368 aa		5.17	□□□□□ -1.58
APL6	YGR261C	YRB1	P41920	201 aa	Known RBP	5.17	□□□□□ -1.58
APL6	YGR261C	GYP8	P43570	497 aa		5.17	□□□□□ -1.58
APL6	YGR261C	TBF1	Q02457	562 aa		5.17	□□□□□ -1.58
APL6	YGR261C	YPR109W	Q06104	294 aa		5.17	□□□□□ -1.58
APL6	YGR261C	PML1	Q07930	204 aa	Predicted RBP	5.17	□□□□□ -1.58
APL6	YGR261C	TGL5	Q12043	749 aa		5.17	□□□□□ -1.58
APL6	YGR261C	RBD2	Q12270	262 aa		5.17	□□□□□ -1.58
APL6	YGR261C	ARP7	Q12406	477 aa		5.17	□□□□□ -1.58
APL6	YGR261C	SRN2	Q99176	213 aa		5.17	□□□□□ -1.58
APL6	YGR261C	RPS9A	O13516	197 aa	Known RBP	5.16	□□□□□ -1.58
APL6	YGR261C	RPS9B	P05755	195 aa	Known RBP	5.16	□□□□□ -1.58
APL6	YGR261C	SRD1	P09007	221 aa		5.16	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms