RNA–Protein interactions for RNA: YGR143W

SKN1, Transcript of Protein involved in sphingolipid biosynthesis, yeastyeast

Gene SKN1, Length 2,316 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKN1YGR143W GCN3P14741 305 aa6.11□□□□□ -1.43
SKN1YGR143W RPO26P20435 155 aa6.11□□□□□ -1.43
SKN1YGR143W MRPL8P22353 238 aa6.11□□□□□ -1.43
SKN1YGR143W YGL015CP33199 130 aa6.11□□□□□ -1.43
SKN1YGR143W RRD1P40454 393 aaKnown RBP6.11□□□□□ -1.43
SKN1YGR143W ATP22P50273 684 aaPredicted RBP6.11□□□□□ -1.43
SKN1YGR143W DTD1Q07648 150 aaKnown RBP6.11□□□□□ -1.43
SKN1YGR143W UIP4Q08926 304 aa6.11□□□□□ -1.43
SKN1YGR143W YLR125WQ12138 136 aa6.11□□□□□ -1.43
SKN1YGR143W SEY1Q99287 776 aa6.11□□□□□ -1.43
SKN1YGR143W TRP2P00899 507 aaKnown RBP6.1□□□□□ -1.43
SKN1YGR143W SUP45P12385 437 aaKnown RBP6.1□□□□□ -1.43
SKN1YGR143W GYP6P32806 458 aa6.1□□□□□ -1.43
SKN1YGR143W KAP104P38217 918 aaKnown RBP6.1□□□□□ -1.43
SKN1YGR143W RRM3P38766 723 aa6.1□□□□□ -1.43
SKN1YGR143W RTC3P38804 111 aaPredicted RBP6.1□□□□□ -1.43
SKN1YGR143W HUL4P40985 892 aa6.1□□□□□ -1.43
SKN1YGR143W SAP4P53036 818 aa6.1□□□□□ -1.43
SKN1YGR143W NIS1P53939 407 aa6.1□□□□□ -1.43
SKN1YGR143W IRC4Q03036 179 aa6.1□□□□□ -1.43
SKN1YGR143W SUB2Q07478 446 aaKnown RBP6.1□□□□□ -1.43
SKN1YGR143W VHS3Q08438 674 aa6.1□□□□□ -1.43
SKN1YGR143W GYP5Q12344 894 aa6.1□□□□□ -1.43
SKN1YGR143W KIN3P22209 435 aa6.1□□□□□ -1.43
SKN1YGR143W LCB1P25045 558 aaKnown RBP6.1□□□□□ -1.43
SKN1YGR143W SPB1P25582 841 aaPredicted RBP6.1□□□□□ -1.43
SKN1YGR143W CBF2P32504 956 aa6.1□□□□□ -1.43
SKN1YGR143W PRP19P32523 503 aaKnown RBP6.1□□□□□ -1.43
SKN1YGR143W GLC3P32775 704 aa6.1□□□□□ -1.43
SKN1YGR143W CPR5P35176 225 aa6.1□□□□□ -1.43
SKN1YGR143W GIP1P38229 639 aa6.1□□□□□ -1.43
SKN1YGR143W ALD5P40047 520 aaKnown RBP6.1□□□□□ -1.43
SKN1YGR143W MAL11P53048 616 aa6.1□□□□□ -1.43
SKN1YGR143W LIF1P53150 421 aa6.1□□□□□ -1.43
SKN1YGR143W UFD2P54860 961 aa6.1□□□□□ -1.43
SKN1YGR143W RPM2Q02773 1202 aa6.1□□□□□ -1.43
SKN1YGR143W ALR1Q08269 859 aa6.1□□□□□ -1.43
SKN1YGR143W THP3Q12049 470 aaKnown RBP6.1□□□□□ -1.43
SKN1YGR143W ENO2P00925 437 aaKnown RBP6.09□□□□□ -1.43
SKN1YGR143W KSS1P14681 368 aa6.09□□□□□ -1.43
SKN1YGR143W MSD1P15179 658 aaKnown RBP6.09□□□□□ -1.43
SKN1YGR143W CNA1P23287 553 aa6.09□□□□□ -1.43
SKN1YGR143W URA1P28272 314 aaPredicted RBP6.09□□□□□ -1.43
SKN1YGR143W PCH2P38126 564 aa6.09□□□□□ -1.43
SKN1YGR143W TDP1P38319 544 aa6.09□□□□□ -1.43
SKN1YGR143W MMM1P41800 426 aa6.09□□□□□ -1.43
SKN1YGR143W AGX1P43567 385 aa6.09□□□□□ -1.43
SKN1YGR143W ROK1P45818 564 aaPredicted RBP6.09□□□□□ -1.43
SKN1YGR143W MDE1P47095 244 aa6.09□□□□□ -1.43
SKN1YGR143W SIW14P53965 281 aa6.09□□□□□ -1.43
SKN1YGR143W EGD1Q02642 157 aaKnown RBP6.09□□□□□ -1.43
SKN1YGR143W YMR114CQ04471 368 aaKnown RBP6.09□□□□□ -1.43
SKN1YGR143W SPC24Q04477 213 aa6.09□□□□□ -1.43
SKN1YGR143W IVY1Q04934 453 aa6.09□□□□□ -1.43
SKN1YGR143W ARP9Q05123 467 aa6.09□□□□□ -1.43
SKN1YGR143W YDR286CQ05530 114 aa6.09□□□□□ -1.43
SKN1YGR143W YLR031WQ07978 186 aa6.09□□□□□ -1.43
SKN1YGR143W AIM7Q12156 149 aa6.09□□□□□ -1.43
SKN1YGR143W RRG1Q12167 365 aaPredicted RBP6.09□□□□□ -1.43
SKN1YGR143W LAM4P38800 1345 aa6.09□□□□□ -1.43
SKN1YGR143W RAD1P06777 1100 aa6.09□□□□□ -1.43
SKN1YGR143W URA4P20051 364 aa6.09□□□□□ -1.43
SKN1YGR143W UBC1P21734 215 aaKnown RBP6.09□□□□□ -1.43
SKN1YGR143W KIP1P28742 1111 aa6.09□□□□□ -1.43
SKN1YGR143W CRM1P30822 1084 aaKnown RBP6.09□□□□□ -1.43
SKN1YGR143W YKL023WP36103 277 aaKnown RBP6.09□□□□□ -1.43
SKN1YGR143W HSE1P38753 452 aa6.09□□□□□ -1.43
SKN1YGR143W POL31P46957 487 aa6.09□□□□□ -1.43
SKN1YGR143W NIT3P49954 291 aa6.09□□□□□ -1.43
SKN1YGR143W MRPL50P53724 139 aa6.09□□□□□ -1.43
SKN1YGR143W YNL193WP53870 558 aa6.09□□□□□ -1.43
SKN1YGR143W TBF1Q02457 562 aa6.09□□□□□ -1.43
SKN1YGR143W RMI1Q02685 241 aa6.09□□□□□ -1.43
SKN1YGR143W VIP1Q06685 1146 aaKnown RBP6.09□□□□□ -1.43
SKN1YGR143W NSE1Q07913 336 aa6.09□□□□□ -1.43
SKN1YGR143W TSR3Q12094 313 aaKnown RBP6.09□□□□□ -1.43
SKN1YGR143W ADR1P07248 1323 aa6.08□□□□□ -1.44
SKN1YGR143W AI2P03876 854 aa6.08□□□□□ -1.44
SKN1YGR143W SIR3P06701 978 aa6.08□□□□□ -1.44
SKN1YGR143W STE3P06783 470 aa6.08□□□□□ -1.44
SKN1YGR143W HOP09932 586 aa6.08□□□□□ -1.44
SKN1YGR143W LAT1P12695 482 aaKnown RBP6.08□□□□□ -1.44
SKN1YGR143W STI1P15705 589 aaKnown RBP RIP-Chip data6.08□□□□□ -1.44not detected
SKN1YGR143W SUV3P32580 737 aa6.08□□□□□ -1.44
SKN1YGR143W YNG2P38806 282 aaKnown RBP6.08□□□□□ -1.44
SKN1YGR143W KEL1P38853 1164 aaKnown RBP6.08□□□□□ -1.44
SKN1YGR143W VPS8P39702 1274 aa6.08□□□□□ -1.44
SKN1YGR143W SPO22P40511 975 aa6.08□□□□□ -1.44
SKN1YGR143W RTS2P40962 232 aa6.08□□□□□ -1.44
SKN1YGR143W BNA3P47039 444 aaKnown RBP6.08□□□□□ -1.44
SKN1YGR143W OKP1P53298 406 aa6.08□□□□□ -1.44
SKN1YGR143W RMD1Q03441 430 aa6.08□□□□□ -1.44
SKN1YGR143W HMO1Q03973 246 aaKnown RBP6.08□□□□□ -1.44
SKN1YGR143W GLO2Q05584 274 aa6.08□□□□□ -1.44
SKN1YGR143W ATG23Q06671 453 aa6.08□□□□□ -1.44
SKN1YGR143W MRN1Q08925 612 aaKnown RBP RIP-Chip data6.08□□□□□ -1.44not detected
SKN1YGR143W VIK1Q12045 647 aa6.08□□□□□ -1.44
SKN1YGR143W DAS2Q12084 232 aa6.08□□□□□ -1.44
SKN1YGR143W YPR022CQ12139 1133 aa6.08□□□□□ -1.44
SKN1YGR143W ENO1P00924 437 aaKnown RBP6.08□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 39.3 ms