RNA–Protein interactions for RNA: YER098W

UBP9, Transcript of Ubiquitin-specific protease that cleaves ubiquitin-protein fusions, yeastyeast

Gene UBP9, Length 2,265 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP9YER098W CDC60P26637 1090 aaKnown RBP5.63□□□□□ -1.51
UBP9YER098W URA1P28272 314 aaPredicted RBP5.63□□□□□ -1.51
UBP9YER098W CHS3P29465 1165 aa5.63□□□□□ -1.51
UBP9YER098W SEC65P29478 273 aa5.63□□□□□ -1.51
UBP9YER098W FUN30P31380 1131 aa5.63□□□□□ -1.51
UBP9YER098W PCH2P38126 564 aa5.63□□□□□ -1.51
UBP9YER098W YNG2P38806 282 aaKnown RBP5.63□□□□□ -1.51
UBP9YER098W RIO2P40160 425 aaKnown RBP5.63□□□□□ -1.51
UBP9YER098W TRS130Q03660 1102 aa5.63□□□□□ -1.51
UBP9YER098W RBA50Q04418 439 aa5.63□□□□□ -1.51
UBP9YER098W SDH5Q08230 162 aa5.63□□□□□ -1.51
UBP9YER098W YDR056CQ12025 205 aa5.63□□□□□ -1.51
UBP9YER098W SIR4P11978 1358 aa5.62□□□□□ -1.51
UBP9YER098W YML133CQ03099 1374 aa5.62□□□□□ -1.51
UBP9YER098W YLL067CQ07888 1374 aa5.62□□□□□ -1.51
UBP9YER098W YLL066CQ99208 1374 aa5.62□□□□□ -1.51
UBP9YER098W CHC1P22137 1653 aaKnown RBP5.62□□□□□ -1.51
UBP9YER098W PET111P08468 800 aa5.62□□□□□ -1.51
UBP9YER098W ATP12P22135 325 aa5.62□□□□□ -1.51
UBP9YER098W MSM1P22438 575 aa5.62□□□□□ -1.51
UBP9YER098W GPT2P36148 743 aa5.62□□□□□ -1.51
UBP9YER098W BNA2P47125 453 aa5.62□□□□□ -1.51
UBP9YER098W RNR4P49723 345 aaKnown RBP5.62□□□□□ -1.51
UBP9YER098W SPO19Q03029 223 aa5.62□□□□□ -1.51
UBP9YER098W CIA1Q05583 330 aa5.62□□□□□ -1.51
UBP9YER098W RTP1Q12751 981 aa5.62□□□□□ -1.51
UBP9YER098W NTE1Q04958 1679 aa5.62□□□□□ -1.51
UBP9YER098W YME2P32843 850 aa5.62□□□□□ -1.51
UBP9YER098W HEL1P36113 551 aa5.62□□□□□ -1.51
UBP9YER098W PXR1P53335 271 aaPredicted RBP5.62□□□□□ -1.51
UBP9YER098W OMS1Q06668 471 aa5.62□□□□□ -1.51
UBP9YER098W PUS7Q08647 676 aaKnown RBP5.62□□□□□ -1.51
UBP9YER098W VMR1P38735 1592 aa5.61□□□□□ -1.51
UBP9YER098W JNM1P36224 373 aa5.61□□□□□ -1.51
UBP9YER098W YFL052WP43551 465 aa5.61□□□□□ -1.51
UBP9YER098W DCS2Q12123 353 aa5.61□□□□□ -1.51
UBP9YER098W NOP56Q12460 504 aaKnown RBP RIP-Chip data5.61□□□□□ -1.51not detected
UBP9YER098W SUP35P05453 685 aaKnown RBP5.6□□□□□ -1.51
UBP9YER098W CYS3P31373 394 aaKnown RBP5.6□□□□□ -1.51
UBP9YER098W NDC80P40460 691 aa5.6□□□□□ -1.51
UBP9YER098W ASK10P48361 1146 aa5.6□□□□□ -1.51
UBP9YER098W DSE4P53753 1117 aa5.6□□□□□ -1.51
UBP9YER098W NUR1Q12066 484 aa5.6□□□□□ -1.51
UBP9YER098W FOB1O13329 566 aa5.6□□□□□ -1.51
UBP9YER098W COQ4O13525 335 aa5.6□□□□□ -1.51
UBP9YER098W GPM1P00950 247 aaKnown RBP5.6□□□□□ -1.51
UBP9YER098W RRP43P25359 394 aaPredicted RBP5.6□□□□□ -1.51
UBP9YER098W ECM32P32644 1121 aaKnown RBP5.6□□□□□ -1.51
UBP9YER098W PRX1P34227 261 aaKnown RBP5.6□□□□□ -1.51
UBP9YER098W SET5P38890 526 aaKnown RBP5.6□□□□□ -1.51
UBP9YER098W TMA108P40462 946 aa5.6□□□□□ -1.51
UBP9YER098W RIA1P53893 1110 aa5.6□□□□□ -1.51
UBP9YER098W TEP1P53916 434 aa5.6□□□□□ -1.51
UBP9YER098W YMR018WQ04364 514 aa5.6□□□□□ -1.51
UBP9YER098W CSI1Q04368 295 aa5.6□□□□□ -1.51
UBP9YER098W SFH1Q06168 426 aa5.6□□□□□ -1.51
UBP9YER098W YOR059CQ08448 450 aaKnown RBP5.6□□□□□ -1.51
UBP9YER098W YRF1-4O13559 1382 aa5.6□□□□□ -1.51
UBP9YER098W RPS9AO13516 197 aaKnown RBP5.59□□□□□ -1.51
UBP9YER098W RPL19AP0CX82 189 aaKnown RBP5.59□□□□□ -1.51
UBP9YER098W RPL19BP0CX83 189 aaPredicted RBP5.59□□□□□ -1.51
UBP9YER098W ACE2P21192 770 aa5.59□□□□□ -1.51
UBP9YER098W NAM7P30771 971 aaKnown RBP5.59□□□□□ -1.51
UBP9YER098W RPC82P32349 654 aa5.59□□□□□ -1.51
UBP9YER098W PET309P32522 965 aaPredicted RBP5.59□□□□□ -1.51
UBP9YER098W ELM1P32801 640 aa5.59□□□□□ -1.51
UBP9YER098W LAM1P38851 1228 aa5.59□□□□□ -1.51
UBP9YER098W YGL242CP53066 181 aa5.59□□□□□ -1.51
UBP9YER098W MEP3P53390 489 aa5.59□□□□□ -1.51
UBP9YER098W BLS1Q06071 122 aa5.59□□□□□ -1.51
UBP9YER098W APL4Q12028 832 aa5.59□□□□□ -1.51
UBP9YER098W RUD3Q12234 484 aaKnown RBP5.59□□□□□ -1.51
UBP9YER098W YLR149CQ99296 730 aa5.59□□□□□ -1.51
UBP9YER098W USO1P25386 1790 aa5.59□□□□□ -1.51
UBP9YER098W PRC1P00729 532 aa5.59□□□□□ -1.51
UBP9YER098W PSY4P38193 441 aa5.59□□□□□ -1.51
UBP9YER098W SPT8P38915 602 aa5.59□□□□□ -1.51
UBP9YER098W ALT1P52893 592 aa5.59□□□□□ -1.51
UBP9YER098W HDA1P53973 706 aa5.59□□□□□ -1.51
UBP9YER098W WAR1Q03631 944 aa5.59□□□□□ -1.51
UBP9YER098W UBX2Q04228 584 aa5.59□□□□□ -1.51
UBP9YER098W HLR1Q04429 423 aa5.59□□□□□ -1.51
UBP9YER098W YOR022CQ12204 715 aa5.59□□□□□ -1.51
UBP9YER098W HOP1P20050 605 aa5.58□□□□□ -1.52
UBP9YER098W CDC15P27636 974 aa5.58□□□□□ -1.52
UBP9YER098W NUF2P33895 451 aa5.58□□□□□ -1.52
UBP9YER098W YKR018CP36114 725 aa5.58□□□□□ -1.52
UBP9YER098W PIK1P39104 1066 aa5.58□□□□□ -1.52
UBP9YER098W YER130CP39959 443 aa5.58□□□□□ -1.52
UBP9YER098W BNA1P47096 177 aa5.58□□□□□ -1.52
UBP9YER098W HFM1P51979 1187 aa5.58□□□□□ -1.52
UBP9YER098W EAR1Q03212 550 aa5.58□□□□□ -1.52
UBP9YER098W ARO80Q04052 950 aa5.58□□□□□ -1.52
UBP9YER098W ORM2Q06144 216 aa5.58□□□□□ -1.52
UBP9YER098W OPY2Q06810 360 aa5.58□□□□□ -1.52
UBP9YER098W XYL2Q07993 356 aa5.58□□□□□ -1.52
UBP9YER098W YVC1Q12324 675 aa5.58□□□□□ -1.52
UBP9YER098W TY1B-AO13527 1196 aaKnown RBP5.58□□□□□ -1.52
UBP9YER098W GPA1P08539 472 aa5.58□□□□□ -1.52
UBP9YER098W KAR3P17119 729 aa5.58□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 22.9 ms