RNA–Protein interactions for RNA: YDR364C

CDC40, Transcript of Pre-mRNA splicing factor, yeastyeast

Gene CDC40, Length 1,368 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC40YDR364C PEA2P40091 420 aa3.89□□□□□ -1.79
CDC40YDR364C GYP7P48365 746 aa3.89□□□□□ -1.79
CDC40YDR364C YGR021WP53212 290 aa3.89□□□□□ -1.79
CDC40YDR364C SRP1Q02821 542 aaKnown RBP3.89□□□□□ -1.79
CDC40YDR364C DUS3Q06053 668 aaKnown RBP3.89□□□□□ -1.79
CDC40YDR364C ROM2P51862 1356 aaKnown RBP3.89□□□□□ -1.79
CDC40YDR364C RRP5Q05022 1729 aaKnown RBP3.89□□□□□ -1.79
CDC40YDR364C FBP1P09201 348 aa3.89□□□□□ -1.79
CDC40YDR364C SST2P11972 698 aaKnown RBP3.89□□□□□ -1.79
CDC40YDR364C PRP19P32523 503 aaKnown RBP3.89□□□□□ -1.79
CDC40YDR364C MTC2P34246 357 aa3.89□□□□□ -1.79
CDC40YDR364C YKL133CP36066 463 aa3.89□□□□□ -1.79
CDC40YDR364C GPP1P41277 250 aaKnown RBP3.89□□□□□ -1.79
CDC40YDR364C ALG2P43636 503 aa3.89□□□□□ -1.79
CDC40YDR364C IMO32P53219 342 aa3.89□□□□□ -1.79
CDC40YDR364C YNL050CP53952 270 aa3.89□□□□□ -1.79
CDC40YDR364C COG4Q06096 861 aa3.89□□□□□ -1.79
CDC40YDR364C PEX19Q07418 342 aa3.89□□□□□ -1.79
CDC40YDR364C YLR001CQ07895 862 aa3.89□□□□□ -1.79
CDC40YDR364C ICT1Q12385 394 aa3.89□□□□□ -1.79
CDC40YDR364C EDE1P34216 1381 aa3.88□□□□□ -1.79
CDC40YDR364C CDC9P04819 755 aa3.88□□□□□ -1.79
CDC40YDR364C SRD1P09007 221 aa3.88□□□□□ -1.79
CDC40YDR364C TUB1P09733 447 aaKnown RBP3.88□□□□□ -1.79
CDC40YDR364C DAL5P15365 543 aa3.88□□□□□ -1.79
CDC40YDR364C KCC4P25389 1037 aa3.88□□□□□ -1.79
CDC40YDR364C ILV6P25605 309 aaKnown RBP3.88□□□□□ -1.79
CDC40YDR364C SEC21P32074 935 aaKnown RBP3.88□□□□□ -1.79
CDC40YDR364C PLC1P32383 869 aa3.88□□□□□ -1.79
CDC40YDR364C PET10P36139 283 aa3.88□□□□□ -1.79
CDC40YDR364C YRO2P38079 344 aa3.88□□□□□ -1.79
CDC40YDR364C MAM1P40065 302 aa3.88□□□□□ -1.79
CDC40YDR364C YNL034WP53963 612 aa3.88□□□□□ -1.79
CDC40YDR364C YNL018CP53976 612 aa3.88□□□□□ -1.79
CDC40YDR364C ADE16P54113 591 aaKnown RBP3.88□□□□□ -1.79
CDC40YDR364C MTQ2Q03920 221 aaPredicted RBP3.88□□□□□ -1.79
CDC40YDR364C ENT2Q05785 613 aa3.88□□□□□ -1.79
CDC40YDR364C ADY4Q05955 493 aa3.88□□□□□ -1.79
CDC40YDR364C YNL162W-AQ3E7A8 72 aa3.88□□□□□ -1.79
CDC40YDR364C TY4B-HP0C2J7 1802 aa3.87□□□□□ -1.79
CDC40YDR364C TY4B-JP47024 1803 aa3.87□□□□□ -1.79
CDC40YDR364C MLP1Q02455 1875 aaKnown RBP3.87□□□□□ -1.79
CDC40YDR364C ADE8P04161 214 aa3.87□□□□□ -1.79
CDC40YDR364C PGI1P12709 554 aaKnown RBP3.87□□□□□ -1.79
CDC40YDR364C GFA1P14742 717 aaKnown RBP3.87□□□□□ -1.79
CDC40YDR364C MDM10P18409 493 aa3.87□□□□□ -1.79
CDC40YDR364C MRS6P32864 603 aaKnown RBP3.87□□□□□ -1.79
CDC40YDR364C PPZ2P33329 710 aa3.87□□□□□ -1.79
CDC40YDR364C YKR078WP36158 585 aaKnown RBP3.87□□□□□ -1.79
CDC40YDR364C NOC2P39744 710 aaKnown RBP3.87□□□□□ -1.79
CDC40YDR364C MGS1P40151 587 aa3.87□□□□□ -1.79
CDC40YDR364C BUD27P43573 796 aaKnown RBP RIP-Chip data3.87□□□□□ -1.79not detected
CDC40YDR364C MET13P53128 600 aa3.87□□□□□ -1.79
CDC40YDR364C DLT1Q04216 342 aa3.87□□□□□ -1.79
CDC40YDR364C LYS2P07702 1392 aa3.86□□□□□ -1.79
CDC40YDR364C MET3P08536 511 aa3.86□□□□□ -1.79
CDC40YDR364C SFL1P20134 766 aa3.86□□□□□ -1.79
CDC40YDR364C RPN12P32496 274 aa3.86□□□□□ -1.79
CDC40YDR364C TDP1P38319 544 aa3.86□□□□□ -1.79
CDC40YDR364C RIX1P38883 763 aaPredicted RBP3.86□□□□□ -1.79
CDC40YDR364C VID27P40157 782 aa3.86□□□□□ -1.79
CDC40YDR364C ELO3P40319 345 aa3.86□□□□□ -1.79
CDC40YDR364C YIL092WP40497 633 aa3.86□□□□□ -1.79
CDC40YDR364C GUS1P46655 708 aaKnown RBP RIP-Chip data3.86□□□□□ -1.79not detected
CDC40YDR364C TY4A-JP47023 414 aa3.86□□□□□ -1.79
CDC40YDR364C TAH11P47112 604 aa3.86□□□□□ -1.79
CDC40YDR364C PIP2P52960 996 aa3.86□□□□□ -1.79
CDC40YDR364C TAN1P53072 289 aaPredicted RBP3.86□□□□□ -1.79
CDC40YDR364C SPC105P53148 917 aa3.86□□□□□ -1.79
CDC40YDR364C MDG1P53885 366 aa3.86□□□□□ -1.79
CDC40YDR364C UBX4P54730 416 aa3.86□□□□□ -1.79
CDC40YDR364C TGL2P54857 326 aa3.86□□□□□ -1.79
CDC40YDR364C GUD1Q07729 489 aa3.86□□□□□ -1.79
CDC40YDR364C ALE1Q08548 619 aa3.86□□□□□ -1.79
CDC40YDR364C BMS1Q08965 1183 aaKnown RBP3.86□□□□□ -1.79
CDC40YDR364C TRM11Q12463 433 aa3.86□□□□□ -1.79
CDC40YDR364C APC1P53886 1748 aa3.85□□□□□ -1.79
CDC40YDR364C PIF1P07271 859 aa3.85□□□□□ -1.79
CDC40YDR364C PCL2P25693 308 aa3.85□□□□□ -1.79
CDC40YDR364C MPE1P35728 441 aaKnown RBP3.85□□□□□ -1.79
CDC40YDR364C YBR238CP38330 731 aaKnown RBP3.85□□□□□ -1.79
CDC40YDR364C RIM4P38741 713 aa3.85□□□□□ -1.79
CDC40YDR364C SDP1P40479 209 aa3.85□□□□□ -1.79
CDC40YDR364C YFR016CP43597 1233 aaKnown RBP3.85□□□□□ -1.79
CDC40YDR364C YJR096WP47137 282 aa3.85□□□□□ -1.79
CDC40YDR364C YKE2P52553 114 aa3.85□□□□□ -1.79
CDC40YDR364C YBP2P53169 641 aa3.85□□□□□ -1.79
CDC40YDR364C MET14Q02196 202 aa3.85□□□□□ -1.79
CDC40YDR364C RMT2Q03305 412 aa3.85□□□□□ -1.79
CDC40YDR364C LCD1Q04377 747 aa3.85□□□□□ -1.79
CDC40YDR364C YPR196WQ06595 470 aa3.85□□□□□ -1.79
CDC40YDR364C NOT3P06102 836 aaKnown RBP3.84□□□□□ -1.79
CDC40YDR364C AEP2P22136 580 aa3.84□□□□□ -1.79
CDC40YDR364C SPC29P33419 253 aa3.84□□□□□ -1.79
CDC40YDR364C NIC96P34077 839 aa3.84□□□□□ -1.79
CDC40YDR364C STO1P34160 861 aaKnown RBP3.84□□□□□ -1.79
CDC40YDR364C PTH2P34222 208 aa3.84□□□□□ -1.79
CDC40YDR364C DOT5P40553 215 aa3.84□□□□□ -1.79
CDC40YDR364C VPS73P53142 486 aaKnown RBP3.84□□□□□ -1.79
CDC40YDR364C SVL3Q03088 825 aaKnown RBP3.84□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms