RNA–Protein interactions for RNA: YDR354W

TRP4, Transcript of Anthranilate phosphoribosyl transferase, yeast

Gene TRP4, Length 1,143 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRP4	YDR354W	YPT7	P32939	208 aa		5.76	□□□□□ -1.49
TRP4	YDR354W	BIT61	P47041	543 aa		5.76	□□□□□ -1.49
TRP4	YDR354W	PRP28	P23394	588 aa		5.75	□□□□□ -1.49
TRP4	YDR354W	EMP70	P32802	667 aa		5.75	□□□□□ -1.49
TRP4	YDR354W	PPZ2	P33329	710 aa		5.75	□□□□□ -1.49
TRP4	YDR354W	BDH2	P39713	417 aa		5.75	□□□□□ -1.49
TRP4	YDR354W	MPS3	P47069	682 aa		5.75	□□□□□ -1.49
TRP4	YDR354W	GPG1	P53130	126 aa		5.75	□□□□□ -1.49
TRP4	YDR354W	YGR151C	P53287	111 aa		5.75	□□□□□ -1.49
TRP4	YDR354W	RPS9B	P05755	195 aa	Known RBP	5.74	□□□□□ -1.49
TRP4	YDR354W	SWI6	P09959	803 aa		5.74	□□□□□ -1.49
TRP4	YDR354W	SEC15	P22224	910 aa		5.74	□□□□□ -1.49
TRP4	YDR354W	COS111	P38308	924 aa		5.74	□□□□□ -1.49
TRP4	YDR354W	YHR097C	P38809	366 aa	Known RBP	5.74	□□□□□ -1.49
TRP4	YDR354W	CCT5	P40413	562 aa	Known RBP	5.74	□□□□□ -1.49
TRP4	YDR354W	PMT3	P47190	753 aa		5.74	□□□□□ -1.49
TRP4	YDR354W	ECM9	Q02202	377 aa		5.74	□□□□□ -1.49
TRP4	YDR354W	VBA4	Q04602	768 aa	Known RBP	5.74	□□□□□ -1.49
TRP4	YDR354W	BNR1	P40450	1375 aa		5.73	□□□□□ -1.49
TRP4	YDR354W	KIN82	P25341	720 aa		5.73	□□□□□ -1.49
TRP4	YDR354W	FUB1	P25659	250 aa		5.73	□□□□□ -1.49
TRP4	YDR354W	SEC65	P29478	273 aa		5.73	□□□□□ -1.49
TRP4	YDR354W	HXT6	P39003	570 aa	Known RBP	5.73	□□□□□ -1.49
TRP4	YDR354W	HXT7	P39004	570 aa		5.73	□□□□□ -1.49
TRP4	YDR354W	YFT2	Q06676	274 aa		5.73	□□□□□ -1.49
TRP4	YDR354W	YDL086W	Q07505	273 aa		5.73	□□□□□ -1.49
TRP4	YDR354W	SGS1	P35187	1447 aa		5.73	□□□□□ -1.49
TRP4	YDR354W	IME1	P21190	360 aa		5.72	□□□□□ -1.49
TRP4	YDR354W	KSP1	P38691	1029 aa	Known RBP	5.72	□□□□□ -1.49
TRP4	YDR354W	OAF1	P39720	1047 aa	Predicted RBP	5.72	□□□□□ -1.49
TRP4	YDR354W	ATF1	P40353	525 aa		5.72	□□□□□ -1.49
TRP4	YDR354W	YIL166C	P40445	542 aa		5.72	□□□□□ -1.49
TRP4	YDR354W	GZF3	P42944	551 aa	Known RBP	5.72	□□□□□ -1.49
TRP4	YDR354W	YHM2	Q04013	314 aa		5.72	□□□□□ -1.49
TRP4	YDR354W	RPS17A	P02407	136 aa	Known RBP	5.71	□□□□□ -1.5
TRP4	YDR354W	RPS17B	P14127	136 aa	Known RBP	5.71	□□□□□ -1.5
TRP4	YDR354W	ABF1	P14164	731 aa		5.71	□□□□□ -1.5
TRP4	YDR354W	MSS1	P32559	526 aa	Predicted RBP	5.71	□□□□□ -1.5
TRP4	YDR354W	PEX2	P32800	271 aa		5.71	□□□□□ -1.5
TRP4	YDR354W	CTP1	P38152	299 aa		5.71	□□□□□ -1.5
TRP4	YDR354W	KHA1	P40309	873 aa		5.71	□□□□□ -1.5
TRP4	YDR354W	GPP1	P41277	250 aa	Known RBP	5.71	□□□□□ -1.5
TRP4	YDR354W	YGR237C	P50089	785 aa		5.71	□□□□□ -1.5
TRP4	YDR354W	NMA2	P53204	395 aa		5.71	□□□□□ -1.5
TRP4	YDR354W	NOP15	P53927	220 aa	Predicted RBP	5.71	□□□□□ -1.5
TRP4	YDR354W	LGE1	Q02796	332 aa	Known RBP	5.71	□□□□□ -1.5
TRP4	YDR354W	STP4	Q07351	490 aa		5.71	□□□□□ -1.5
TRP4	YDR354W	YTM1	Q12024	460 aa	Predicted RBP	5.71	□□□□□ -1.5
TRP4	YDR354W	GMH1	P36125	273 aa		5.7	□□□□□ -1.5
TRP4	YDR354W	RIX1	P38883	763 aa	Predicted RBP	5.7	□□□□□ -1.5
TRP4	YDR354W	BUD8	P41698	603 aa		5.7	□□□□□ -1.5
TRP4	YDR354W	PXA1	P41909	870 aa		5.7	□□□□□ -1.5
TRP4	YDR354W	HFD1	Q04458	532 aa		5.7	□□□□□ -1.5
TRP4	YDR354W	FAP7	Q12055	197 aa	Predicted RBP	5.7	□□□□□ -1.5
TRP4	YDR354W	RPS21A	P0C0V8	87 aa	Known RBP	5.69	□□□□□ -1.5
TRP4	YDR354W	GLN4	P13188	809 aa	Known RBP	5.69	□□□□□ -1.5
TRP4	YDR354W	ADY2	P25613	283 aa		5.69	□□□□□ -1.5
TRP4	YDR354W	YPT53	P36019	220 aa		5.69	□□□□□ -1.5
TRP4	YDR354W	OAF3	P36023	863 aa		5.69	□□□□□ -1.5
TRP4	YDR354W	CUE2	P36075	443 aa	Known RBP	5.69	□□□□□ -1.5
TRP4	YDR354W	FAT1	P38225	669 aa		5.69	□□□□□ -1.5
TRP4	YDR354W	DUN1	P39009	513 aa		5.69	□□□□□ -1.5
TRP4	YDR354W	YML122C	Q03207	126 aa		5.69	□□□□□ -1.5
TRP4	YDR354W	FLO10	P36170	1169 aa		5.68	□□□□□ -1.5
TRP4	YDR354W	BRN1	P38170	754 aa		5.68	□□□□□ -1.5
TRP4	YDR354W	MNN11	P46985	422 aa	Known RBP	5.68	□□□□□ -1.5
TRP4	YDR354W	SPC98	P53540	846 aa		5.68	□□□□□ -1.5
TRP4	YDR354W	HFI1	Q12060	488 aa		5.68	□□□□□ -1.5
TRP4	YDR354W	TUB1	P09733	447 aa	Known RBP	5.67	□□□□□ -1.5
TRP4	YDR354W	SPO11	P23179	398 aa		5.67	□□□□□ -1.5
TRP4	YDR354W	PRP22	P24384	1145 aa	Known RBP	5.67	□□□□□ -1.5
TRP4	YDR354W	YEL020C	P39994	560 aa		5.67	□□□□□ -1.5
TRP4	YDR354W	APM1	Q00776	475 aa	Predicted RBP	5.67	□□□□□ -1.5
TRP4	YDR354W	YSH1	Q06224	779 aa	Predicted RBP	5.67	□□□□□ -1.5
TRP4	YDR354W	LAM4	P38800	1345 aa		5.67	□□□□□ -1.5
TRP4	YDR354W	KCC4	P25389	1037 aa		5.66	□□□□□ -1.5
TRP4	YDR354W	NTH1	P32356	751 aa		5.66	□□□□□ -1.5
TRP4	YDR354W	ELF1	P36053	145 aa		5.66	□□□□□ -1.5
TRP4	YDR354W	IES1	P43579	692 aa		5.66	□□□□□ -1.5
TRP4	YDR354W	DIP5	P53388	608 aa		5.66	□□□□□ -1.5
TRP4	YDR354W	DOS2	P54858	310 aa		5.66	□□□□□ -1.5
TRP4	YDR354W	ARO10	Q06408	635 aa		5.66	□□□□□ -1.5
TRP4	YDR354W	IZH3	Q07959	543 aa		5.66	□□□□□ -1.5
TRP4	YDR354W	RKI1	Q12189	258 aa		5.66	□□□□□ -1.5
TRP4	YDR354W	DID4	P36108	232 aa		5.65	□□□□□ -1.5
TRP4	YDR354W	APL3	P38065	1025 aa		5.65	□□□□□ -1.5
TRP4	YDR354W	VID28	P40547	921 aa		5.65	□□□□□ -1.5
TRP4	YDR354W	PTA1	Q01329	785 aa	Predicted RBP	5.65	□□□□□ -1.5
TRP4	YDR354W	PPN1	Q04119	674 aa		5.65	□□□□□ -1.5
TRP4	YDR354W	SSN2	P38931	1420 aa		5.65	□□□□□ -1.51
TRP4	YDR354W	INO80	P53115	1489 aa		5.64	□□□□□ -1.51
TRP4	YDR354W	YMC2	P38087	329 aa		5.64	□□□□□ -1.51
TRP4	YDR354W	MUP3	P38734	546 aa		5.64	□□□□□ -1.51
TRP4	YDR354W	MIT1	P40002	666 aa		5.64	□□□□□ -1.51
TRP4	YDR354W	TMN3	P40071	706 aa		5.64	□□□□□ -1.51
TRP4	YDR354W	TAF4	P50105	388 aa		5.64	□□□□□ -1.51
TRP4	YDR354W	SPO1	P53541	631 aa		5.64	□□□□□ -1.51
TRP4	YDR354W	SNF12	P53628	566 aa		5.64	□□□□□ -1.51
TRP4	YDR354W	BMS1	Q08965	1183 aa	Known RBP	5.64	□□□□□ -1.51
TRP4	YDR354W	APM4	Q99186	491 aa		5.64	□□□□□ -1.51

Retrieved 100 of 5,963 RNA–protein pairs in 47.6 ms