RNA–Protein interactions for RNA: YDR092W

UBC13, Transcript of E2 ubiquitin-conjugating enzyme, yeast

Gene UBC13, Length 462 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC13	YDR092W	PXA1	P41909	870 aa		4.23	□□□□□ -1.73
UBC13	YDR092W	BIT61	P47041	543 aa		4.23	□□□□□ -1.73
UBC13	YDR092W	ECM9	Q02202	377 aa		4.23	□□□□□ -1.73
UBC13	YDR092W	CHS5	Q12114	671 aa	Known RBP	4.23	□□□□□ -1.73
UBC13	YDR092W	APM4	Q99186	491 aa		4.23	□□□□□ -1.73
UBC13	YDR092W	SEC65	P29478	273 aa		4.22	□□□□□ -1.73
UBC13	YDR092W	YPT7	P32939	208 aa		4.22	□□□□□ -1.73
UBC13	YDR092W	YJL206C	P39529	758 aa		4.22	□□□□□ -1.73
UBC13	YDR092W	BDH2	P39713	417 aa		4.22	□□□□□ -1.73
UBC13	YDR092W	GPP1	P41277	250 aa	Known RBP	4.22	□□□□□ -1.73
UBC13	YDR092W	ENP2	P48234	707 aa	Known RBP	4.22	□□□□□ -1.73
UBC13	YDR092W	GPG1	P53130	126 aa		4.22	□□□□□ -1.73
UBC13	YDR092W	HFI1	Q12060	488 aa		4.22	□□□□□ -1.73
UBC13	YDR092W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
UBC13	YDR092W	RPS9B	P05755	195 aa	Known RBP	4.21	□□□□□ -1.74
UBC13	YDR092W	THR1	P17423	357 aa	Known RBP	4.21	□□□□□ -1.74
UBC13	YDR092W	FEN2	P25621	512 aa	Known RBP	4.21	□□□□□ -1.74
UBC13	YDR092W	HXT6	P39003	570 aa	Known RBP	4.21	□□□□□ -1.74
UBC13	YDR092W	HXT7	P39004	570 aa		4.21	□□□□□ -1.74
UBC13	YDR092W	UBP12	P39538	1254 aa		4.21	□□□□□ -1.74
UBC13	YDR092W	NOP15	P53927	220 aa	Predicted RBP	4.21	□□□□□ -1.74
UBC13	YDR092W	NSE5	Q03718	556 aa		4.21	□□□□□ -1.74
UBC13	YDR092W	YHM2	Q04013	314 aa		4.21	□□□□□ -1.74
UBC13	YDR092W	VPS36	Q06696	566 aa		4.21	□□□□□ -1.74
UBC13	YDR092W	MLH3	Q12083	715 aa		4.21	□□□□□ -1.74
UBC13	YDR092W	TAF3	Q12297	353 aa		4.21	□□□□□ -1.74
UBC13	YDR092W	RPS17A	P02407	136 aa	Known RBP	4.2	□□□□□ -1.74
UBC13	YDR092W	RPS17B	P14127	136 aa	Known RBP	4.2	□□□□□ -1.74
UBC13	YDR092W	OAF3	P36023	863 aa		4.2	□□□□□ -1.74
UBC13	YDR092W	CTP1	P38152	299 aa		4.2	□□□□□ -1.74
UBC13	YDR092W	DUN1	P39009	513 aa		4.2	□□□□□ -1.74
UBC13	YDR092W	YIL166C	P40445	542 aa		4.2	□□□□□ -1.74
UBC13	YDR092W	YIL077C	P40508	320 aa		4.2	□□□□□ -1.74
UBC13	YDR092W	DUG1	P43616	481 aa	Known RBP	4.2	□□□□□ -1.74
UBC13	YDR092W	VPS73	P53142	486 aa	Known RBP	4.2	□□□□□ -1.74
UBC13	YDR092W	SPO1	P53541	631 aa		4.2	□□□□□ -1.74
UBC13	YDR092W	YFT2	Q06676	274 aa		4.2	□□□□□ -1.74
UBC13	YDR092W	BMS1	Q08965	1183 aa	Known RBP	4.2	□□□□□ -1.74
UBC13	YDR092W	USV1	Q12132	391 aa		4.2	□□□□□ -1.74
UBC13	YDR092W	RPN13	O13563	156 aa		4.19	□□□□□ -1.74
UBC13	YDR092W	KCC4	P25389	1037 aa		4.19	□□□□□ -1.74
UBC13	YDR092W	ILV6	P25605	309 aa	Known RBP	4.19	□□□□□ -1.74
UBC13	YDR092W	GMH1	P36125	273 aa		4.19	□□□□□ -1.74
UBC13	YDR092W	COS111	P38308	924 aa		4.19	□□□□□ -1.74
UBC13	YDR092W	MPS3	P47069	682 aa		4.19	□□□□□ -1.74
UBC13	YDR092W	YGR151C	P53287	111 aa		4.19	□□□□□ -1.74
UBC13	YDR092W	YSH1	Q06224	779 aa	Predicted RBP	4.19	□□□□□ -1.74
UBC13	YDR092W	YPS7	Q06325	596 aa		4.19	□□□□□ -1.74
UBC13	YDR092W	YDL086W	Q07505	273 aa		4.19	□□□□□ -1.74
UBC13	YDR092W	RPS21B	Q3E754	87 aa	Known RBP	4.19	□□□□□ -1.74
UBC13	YDR092W	FUB1	P25659	250 aa		4.18	□□□□□ -1.74
UBC13	YDR092W	APL3	P38065	1025 aa		4.18	□□□□□ -1.74
UBC13	YDR092W	TDP1	P38319	544 aa		4.18	□□□□□ -1.74
UBC13	YDR092W	CCT7	P42943	550 aa	Known RBP	4.18	□□□□□ -1.74
UBC13	YDR092W	IES1	P43579	692 aa		4.18	□□□□□ -1.74
UBC13	YDR092W	RGC1	Q06108	1083 aa	Known RBP	4.18	□□□□□ -1.74
UBC13	YDR092W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
UBC13	YDR092W	IME1	P21190	360 aa		4.17	□□□□□ -1.74
UBC13	YDR092W	KHA1	P40309	873 aa		4.17	□□□□□ -1.74
UBC13	YDR092W	BUD8	P41698	603 aa		4.17	□□□□□ -1.74
UBC13	YDR092W	TAH11	P47112	604 aa		4.17	□□□□□ -1.74
UBC13	YDR092W	RFX1	P48743	811 aa		4.17	□□□□□ -1.74
UBC13	YDR092W	RNR4	P49723	345 aa	Known RBP	4.17	□□□□□ -1.74
UBC13	YDR092W	TAF4	P50105	388 aa		4.17	□□□□□ -1.74
UBC13	YDR092W	APM1	Q00776	475 aa	Predicted RBP	4.17	□□□□□ -1.74
UBC13	YDR092W	RCR2	Q03446	210 aa	Known RBP	4.17	□□□□□ -1.74
UBC13	YDR092W	STP4	Q07351	490 aa		4.17	□□□□□ -1.74
UBC13	YDR092W	RMP1	Q12530	201 aa		4.17	□□□□□ -1.74
UBC13	YDR092W	DGR2	P32330	852 aa		4.16	□□□□□ -1.74
UBC13	YDR092W	GRX4	P32642	244 aa		4.16	□□□□□ -1.74
UBC13	YDR092W	SET3	P36124	751 aa		4.16	□□□□□ -1.74
UBC13	YDR092W	UBS1	P38290	277 aa		4.16	□□□□□ -1.74
UBC13	YDR092W	YEN1	P40028	759 aa		4.16	□□□□□ -1.74
UBC13	YDR092W	FDC1	Q03034	503 aa		4.16	□□□□□ -1.74
UBC13	YDR092W	CEF1	Q03654	590 aa	Predicted RBP	4.16	□□□□□ -1.74
UBC13	YDR092W	SKY1	Q03656	742 aa		4.16	□□□□□ -1.74
UBC13	YDR092W	GIS1	Q03833	894 aa		4.16	□□□□□ -1.74
UBC13	YDR092W	HLR1	Q04429	423 aa		4.16	□□□□□ -1.74
UBC13	YDR092W	TRE2	Q08693	809 aa		4.16	□□□□□ -1.74
UBC13	YDR092W	RPS21A	P0C0V8	87 aa	Known RBP	4.15	□□□□□ -1.75
UBC13	YDR092W	GLN4	P13188	809 aa	Known RBP	4.15	□□□□□ -1.75
UBC13	YDR092W	AEP2	P22136	580 aa		4.15	□□□□□ -1.75
UBC13	YDR092W	SPO11	P23179	398 aa		4.15	□□□□□ -1.75
UBC13	YDR092W	VID28	P40547	921 aa		4.15	□□□□□ -1.75
UBC13	YDR092W	THI6	P41835	540 aa		4.15	□□□□□ -1.75
UBC13	YDR092W	DAK1	P54838	584 aa	Known RBP	4.15	□□□□□ -1.75
UBC13	YDR092W	TUF1	P02992	437 aa	Known RBP	4.14	□□□□□ -1.75
UBC13	YDR092W	PRE4	P30657	266 aa		4.14	□□□□□ -1.75
UBC13	YDR092W	MF(ALPHA)2	P32435	120 aa		4.14	□□□□□ -1.75
UBC13	YDR092W	MSS1	P32559	526 aa	Predicted RBP	4.14	□□□□□ -1.75
UBC13	YDR092W	FAT1	P38225	669 aa		4.14	□□□□□ -1.75
UBC13	YDR092W	KSP1	P38691	1029 aa	Known RBP	4.14	□□□□□ -1.75
UBC13	YDR092W	YEL020C	P39994	560 aa		4.14	□□□□□ -1.75
UBC13	YDR092W	EMP65	P40085	556 aa		4.14	□□□□□ -1.75
UBC13	YDR092W	GPP2	P40106	250 aa	Known RBP	4.14	□□□□□ -1.75
UBC13	YDR092W	SPC98	P53540	846 aa		4.14	□□□□□ -1.75
UBC13	YDR092W	UFO1	Q04511	668 aa		4.14	□□□□□ -1.75
UBC13	YDR092W	IZH3	Q07959	543 aa		4.14	□□□□□ -1.75
UBC13	YDR092W	AIM41	Q12032	185 aa		4.14	□□□□□ -1.75
UBC13	YDR092W	YPR027C	Q12079	277 aa		4.14	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 71.6 ms