RNA–Protein interactions for RNA: YDR025W

RPS11A, Transcript of Protein component of the small (40S) ribosomal subunit, yeast

Gene RPS11A, Length 471 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPS11A	YDR025W	PUS2	P53167	370 aa		4.62	□□□□□ -1.67
RPS11A	YDR025W	YNR014W	P53719	212 aa		4.62	□□□□□ -1.67
RPS11A	YDR025W	TEP1	P53916	434 aa		4.62	□□□□□ -1.67
RPS11A	YDR025W	MOT3	P54785	490 aa	Known RBP	4.62	□□□□□ -1.67
RPS11A	YDR025W	LEE1	Q02799	301 aa	Known RBP	4.62	□□□□□ -1.67
RPS11A	YDR025W	MSC2	Q03455	724 aa		4.62	□□□□□ -1.67
RPS11A	YDR025W	TRS130	Q03660	1102 aa		4.62	□□□□□ -1.67
RPS11A	YDR025W	ARO80	Q04052	950 aa		4.62	□□□□□ -1.67
RPS11A	YDR025W	GYL1	Q04322	720 aa		4.62	□□□□□ -1.67
RPS11A	YDR025W	ENT2	Q05785	613 aa		4.62	□□□□□ -1.67
RPS11A	YDR025W	ARR1	Q06596	294 aa		4.62	□□□□□ -1.67
RPS11A	YDR025W	HIM1	Q06674	414 aa		4.62	□□□□□ -1.67
RPS11A	YDR025W	YDL144C	Q07589	356 aa		4.62	□□□□□ -1.67
RPS11A	YDR025W	YPL225W	Q08971	146 aa	Known RBP	4.62	□□□□□ -1.67
RPS11A	YDR025W	PHM7	Q12252	991 aa		4.62	□□□□□ -1.67
RPS11A	YDR025W	RAD50	P12753	1312 aa		4.62	□□□□□ -1.67
RPS11A	YDR025W	AUS1	Q08409	1394 aa		4.62	□□□□□ -1.67
RPS11A	YDR025W	YBT1	P32386	1661 aa		4.61	□□□□□ -1.67
RPS11A	YDR025W	HSF1	P10961	833 aa		4.61	□□□□□ -1.67
RPS11A	YDR025W	CDC26	P14724	124 aa		4.61	□□□□□ -1.67
RPS11A	YDR025W	GFD2	P25370	566 aa	Known RBP	4.61	□□□□□ -1.67
RPS11A	YDR025W	AIM26	P32858	118 aa		4.61	□□□□□ -1.67
RPS11A	YDR025W	AKL1	P38080	1108 aa	Known RBP	4.61	□□□□□ -1.67
RPS11A	YDR025W	RFC1	P38630	861 aa	Known RBP	4.61	□□□□□ -1.67
RPS11A	YDR025W	MIP6	P38760	659 aa	Known RBP	4.61	□□□□□ -1.67
RPS11A	YDR025W	TAF1	P46677	1066 aa		4.61	□□□□□ -1.67
RPS11A	YDR025W	BFA1	P47113	574 aa		4.61	□□□□□ -1.67
RPS11A	YDR025W	PUS4	P48567	403 aa	Known RBP	4.61	□□□□□ -1.67
RPS11A	YDR025W	INP52	P50942	1183 aa		4.61	□□□□□ -1.67
RPS11A	YDR025W	HOL1	P53389	586 aa		4.61	□□□□□ -1.67
RPS11A	YDR025W	HOT1	Q03213	719 aa		4.61	□□□□□ -1.67
RPS11A	YDR025W	UBX2	Q04228	584 aa		4.61	□□□□□ -1.67
RPS11A	YDR025W	OMS1	Q06668	471 aa		4.61	□□□□□ -1.67
RPS11A	YDR025W	NGL1	Q08213	363 aa	Known RBP	4.61	□□□□□ -1.67
RPS11A	YDR025W	SSP2	Q08646	371 aa		4.61	□□□□□ -1.67
RPS11A	YDR025W	TRE1	Q08919	783 aa		4.61	□□□□□ -1.67
RPS11A	YDR025W	CWC2	Q12046	339 aa	Predicted RBP	4.61	□□□□□ -1.67
RPS11A	YDR025W	CFT2	Q12102	859 aa	Predicted RBP	4.61	□□□□□ -1.67
RPS11A	YDR025W	HAP1	P0CE41	1502 aa		4.61	□□□□□ -1.67
RPS11A	YDR025W	KIN2	P13186	1147 aa	Known RBP	4.6	□□□□□ -1.67
RPS11A	YDR025W	GLN4	P13188	809 aa	Known RBP	4.6	□□□□□ -1.67
RPS11A	YDR025W	HSC82	P15108	705 aa	Known RBP	4.6	□□□□□ -1.67
RPS11A	YDR025W	MCM10	P32354	571 aa		4.6	□□□□□ -1.67
RPS11A	YDR025W	PIM1	P36775	1133 aa		4.6	□□□□□ -1.67
RPS11A	YDR025W	LAM1	P38851	1228 aa		4.6	□□□□□ -1.67
RPS11A	YDR025W	AKR1	P39010	764 aa		4.6	□□□□□ -1.67
RPS11A	YDR025W	VID28	P40547	921 aa		4.6	□□□□□ -1.67
RPS11A	YDR025W	AIM21	P40563	679 aa		4.6	□□□□□ -1.67
RPS11A	YDR025W	GTS1	P40956	396 aa		4.6	□□□□□ -1.67
RPS11A	YDR025W	IRC5	P43610	853 aa		4.6	□□□□□ -1.67
RPS11A	YDR025W	UBA2	P52488	636 aa		4.6	□□□□□ -1.67
RPS11A	YDR025W	YGR012W	P53206	393 aa		4.6	□□□□□ -1.67
RPS11A	YDR025W	NOP15	P53927	220 aa	Predicted RBP	4.6	□□□□□ -1.67
RPS11A	YDR025W	TIM50	Q02776	476 aa		4.6	□□□□□ -1.67
RPS11A	YDR025W	SIZ1	Q04195	904 aa		4.6	□□□□□ -1.67
RPS11A	YDR025W	HLR1	Q04429	423 aa		4.6	□□□□□ -1.67
RPS11A	YDR025W	YLR407W	Q06070	228 aa		4.6	□□□□□ -1.67
RPS11A	YDR025W	PSR1	Q07800	427 aa		4.6	□□□□□ -1.67
RPS11A	YDR025W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.6	□□□□□ -1.67	not detected
RPS11A	YDR025W	CIR2	Q08822	631 aa		4.6	□□□□□ -1.67
RPS11A	YDR025W	AI1	P03875	834 aa		4.59	□□□□□ -1.67
RPS11A	YDR025W	SPS1	P08458	490 aa		4.59	□□□□□ -1.67
RPS11A	YDR025W	HXT4	P32467	576 aa		4.59	□□□□□ -1.67
RPS11A	YDR025W	YME2	P32843	850 aa		4.59	□□□□□ -1.67
RPS11A	YDR025W	MFT1	P33441	392 aa	Known RBP	4.59	□□□□□ -1.67
RPS11A	YDR025W	SHM2	P37291	469 aa	Known RBP	4.59	□□□□□ -1.67
RPS11A	YDR025W	MCX1	P38323	520 aa	Predicted RBP	4.59	□□□□□ -1.67
RPS11A	YDR025W	PTC7	P38797	343 aa		4.59	□□□□□ -1.67
RPS11A	YDR025W	YHR202W	P38887	602 aa		4.59	□□□□□ -1.67
RPS11A	YDR025W	HOS4	P40480	1083 aa		4.59	□□□□□ -1.67
RPS11A	YDR025W	SSY5	P47002	699 aa		4.59	□□□□□ -1.67
RPS11A	YDR025W	IML2	P47031	731 aa		4.59	□□□□□ -1.67
RPS11A	YDR025W	PRY1	P47032	299 aa		4.59	□□□□□ -1.67
RPS11A	YDR025W	NPA3	P47122	385 aa		4.59	□□□□□ -1.67
RPS11A	YDR025W	PRP31	P49704	494 aa	Predicted RBP	4.59	□□□□□ -1.67
RPS11A	YDR025W	GPD1	Q00055	391 aa	Known RBP	4.59	□□□□□ -1.67
RPS11A	YDR025W	ASM4	Q05166	528 aa		4.59	□□□□□ -1.67
RPS11A	YDR025W	NUR1	Q12066	484 aa		4.59	□□□□□ -1.67
RPS11A	YDR025W	ARP7	Q12406	477 aa		4.59	□□□□□ -1.67
RPS11A	YDR025W	VPS5	Q92331	675 aa		4.59	□□□□□ -1.67
RPS11A	YDR025W	GFA1	P14742	717 aa	Known RBP	4.58	□□□□□ -1.68
RPS11A	YDR025W	CMP2	P14747	604 aa		4.58	□□□□□ -1.68
RPS11A	YDR025W	PHO3	P24031	467 aa		4.58	□□□□□ -1.68
RPS11A	YDR025W	GAR1	P28007	205 aa	Known RBP	4.58	□□□□□ -1.68
RPS11A	YDR025W	HSP104	P31539	908 aa	Known RBP	4.58	□□□□□ -1.68
RPS11A	YDR025W	ELM1	P32801	640 aa		4.58	□□□□□ -1.68
RPS11A	YDR025W	YKR075C	P36155	307 aa		4.58	□□□□□ -1.68
RPS11A	YDR025W	SRP68	P38687	599 aa	Known RBP	4.58	□□□□□ -1.68
RPS11A	YDR025W	TOM71	P38825	639 aa	Known RBP	4.58	□□□□□ -1.68
RPS11A	YDR025W	CTF8	P38877	133 aa		4.58	□□□□□ -1.68
RPS11A	YDR025W	STL1	P39932	569 aa		4.58	□□□□□ -1.68
RPS11A	YDR025W	MNT3	P40549	630 aa		4.58	□□□□□ -1.68
RPS11A	YDR025W	YFL066C	P43538	392 aa		4.58	□□□□□ -1.68
RPS11A	YDR025W	IES1	P43579	692 aa		4.58	□□□□□ -1.68
RPS11A	YDR025W	YGR035C	P53222	116 aa		4.58	□□□□□ -1.68
RPS11A	YDR025W	JJJ1	P53863	590 aa		4.58	□□□□□ -1.68
RPS11A	YDR025W	GTR1	Q00582	310 aa		4.58	□□□□□ -1.68
RPS11A	YDR025W	SPO19	Q03029	223 aa		4.58	□□□□□ -1.68
RPS11A	YDR025W	GIR2	Q03768	265 aa	Predicted RBP	4.58	□□□□□ -1.68
RPS11A	YDR025W	RSM24	Q03976	319 aa		4.58	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms