RNA–Protein interactions for RNA: YDL216C

RRI1, Transcript of Catalytic subunit of the COP9 signalosome (CSN) complex, yeastyeast

Gene RRI1, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRI1YDL216C BCS1P32839 456 aa5.42□□□□□ -1.54
RRI1YDL216C SEC6P32844 805 aa5.42□□□□□ -1.54
RRI1YDL216C PHO11P35842 467 aa5.42□□□□□ -1.54
RRI1YDL216C PHO12P38693 467 aa5.42□□□□□ -1.54
RRI1YDL216C SDS3P40505 327 aa5.42□□□□□ -1.54
RRI1YDL216C YPS7Q06325 596 aa5.42□□□□□ -1.54
RRI1YDL216C TRE2Q08693 809 aa5.42□□□□□ -1.54
RRI1YDL216C RPS9BP05755 195 aaKnown RBP5.41□□□□□ -1.54
RRI1YDL216C SSB1P11484 613 aaKnown RBP5.41□□□□□ -1.54
RRI1YDL216C PAF1P38351 445 aa5.41□□□□□ -1.54
RRI1YDL216C DUN1P39009 513 aa5.41□□□□□ -1.54
RRI1YDL216C SSB2P40150 613 aaKnown RBP5.41□□□□□ -1.54
RRI1YDL216C PXA1P41909 870 aa5.41□□□□□ -1.54
RRI1YDL216C ENP2P48234 707 aaKnown RBP5.41□□□□□ -1.54
RRI1YDL216C SMX3P54999 86 aaPredicted RBP5.41□□□□□ -1.54
RRI1YDL216C RMP1Q12530 201 aa5.41□□□□□ -1.54
RRI1YDL216C RPS21AP0C0V8 87 aaKnown RBP5.4□□□□□ -1.55
RRI1YDL216C ABF1P14164 731 aa5.4□□□□□ -1.55
RRI1YDL216C IME1P21190 360 aa5.4□□□□□ -1.55
RRI1YDL216C AEP2P22136 580 aa5.4□□□□□ -1.55
RRI1YDL216C EUG1P32474 517 aa5.4□□□□□ -1.55
RRI1YDL216C ARG2P40360 574 aa5.4□□□□□ -1.55
RRI1YDL216C IES1P43579 692 aa5.4□□□□□ -1.55
RRI1YDL216C RNR4P49723 345 aaKnown RBP5.4□□□□□ -1.55
RRI1YDL216C RCR2Q03446 210 aaKnown RBP5.4□□□□□ -1.55
RRI1YDL216C RGC1Q06108 1083 aaKnown RBP5.4□□□□□ -1.55
RRI1YDL216C CHS5Q12114 671 aaKnown RBP5.4□□□□□ -1.55
RRI1YDL216C TMA17Q12513 150 aa5.4□□□□□ -1.55
RRI1YDL216C MRC1P25588 1096 aa5.39□□□□□ -1.55
RRI1YDL216C FEN2P25621 512 aaKnown RBP5.39□□□□□ -1.55
RRI1YDL216C FAT1P38225 669 aa5.39□□□□□ -1.55
RRI1YDL216C NDC80P40460 691 aa5.39□□□□□ -1.55
RRI1YDL216C STU2P46675 888 aa5.39□□□□□ -1.55
RRI1YDL216C ATG4P53867 494 aa5.39□□□□□ -1.55
RRI1YDL216C SKY1Q03656 742 aa5.39□□□□□ -1.55
RRI1YDL216C NSE5Q03718 556 aa5.39□□□□□ -1.55
RRI1YDL216C STP4Q07351 490 aa5.39□□□□□ -1.55
RRI1YDL216C MLH3Q12083 715 aa5.39□□□□□ -1.55
RRI1YDL216C GLN4P13188 809 aaKnown RBP5.38□□□□□ -1.55
RRI1YDL216C THR1P17423 357 aaKnown RBP5.38□□□□□ -1.55
RRI1YDL216C CDC43P18898 376 aa5.38□□□□□ -1.55
RRI1YDL216C NTH1P32356 751 aa5.38□□□□□ -1.55
RRI1YDL216C MTH1P35198 433 aa5.38□□□□□ -1.55
RRI1YDL216C YBR071WP38243 211 aa5.38□□□□□ -1.55
RRI1YDL216C GPP2P40106 250 aaKnown RBP5.38□□□□□ -1.55
RRI1YDL216C YIL077CP40508 320 aa5.38□□□□□ -1.55
RRI1YDL216C VID28P40547 921 aa5.38□□□□□ -1.55
RRI1YDL216C BUD8P41698 603 aa5.38□□□□□ -1.55
RRI1YDL216C GND2P53319 492 aa5.38□□□□□ -1.55
RRI1YDL216C SPO1P53541 631 aa5.38□□□□□ -1.55
RRI1YDL216C YPR027CQ12079 277 aa5.38□□□□□ -1.55
RRI1YDL216C ACO1P19414 778 aaKnown RBP RIP-Chip data5.37□□□□□ -1.55not detected
RRI1YDL216C COS111P38308 924 aa5.37□□□□□ -1.55
RRI1YDL216C NIT2P47016 307 aa5.37□□□□□ -1.55
RRI1YDL216C CTR1P49573 406 aa5.37□□□□□ -1.55
RRI1YDL216C TAF4P50105 388 aa5.37□□□□□ -1.55
RRI1YDL216C YML122CQ03207 126 aa5.37□□□□□ -1.55
RRI1YDL216C YFT2Q06676 274 aa5.37□□□□□ -1.55
RRI1YDL216C IRC10Q08118 586 aa5.37□□□□□ -1.55
RRI1YDL216C USV1Q12132 391 aa5.37□□□□□ -1.55
RRI1YDL216C DMC1P25453 334 aa5.36□□□□□ -1.55
RRI1YDL216C GLG1P36143 616 aa5.36□□□□□ -1.55
RRI1YDL216C RFX1P48743 811 aa5.36□□□□□ -1.55
RRI1YDL216C MRH1Q12117 320 aaPredicted RBP5.36□□□□□ -1.55
RRI1YDL216C NOP56Q12460 504 aaKnown RBP RIP-Chip data5.36□□□□□ -1.55not detected
RRI1YDL216C CDC26P14724 124 aa5.35□□□□□ -1.55
RRI1YDL216C KIN3P22209 435 aa5.35□□□□□ -1.55
RRI1YDL216C MF(ALPHA)2P32435 120 aa5.35□□□□□ -1.55
RRI1YDL216C DAL3P32459 195 aa5.35□□□□□ -1.55
RRI1YDL216C CTP1P38152 299 aa5.35□□□□□ -1.55
RRI1YDL216C YJL206CP39529 758 aa5.35□□□□□ -1.55
RRI1YDL216C BDH2P39713 417 aa5.35□□□□□ -1.55
RRI1YDL216C EMP65P40085 556 aa5.35□□□□□ -1.55
RRI1YDL216C MPS3P47069 682 aa5.35□□□□□ -1.55
RRI1YDL216C DGR2P32330 852 aa5.34□□□□□ -1.55
RRI1YDL216C QRI1P43123 477 aaKnown RBP5.34□□□□□ -1.55
RRI1YDL216C SPC105P53148 917 aa5.34□□□□□ -1.55
RRI1YDL216C YGR151CP53287 111 aa5.34□□□□□ -1.55
RRI1YDL216C YSH1Q06224 779 aaPredicted RBP5.34□□□□□ -1.55
RRI1YDL216C YDL086WQ07505 273 aa5.34□□□□□ -1.55
RRI1YDL216C GFA1P14742 717 aaKnown RBP5.33□□□□□ -1.56
RRI1YDL216C FUB1P25659 250 aa5.33□□□□□ -1.56
RRI1YDL216C PRE4P30657 266 aa5.33□□□□□ -1.56
RRI1YDL216C KHA1P40309 873 aa5.33□□□□□ -1.56
RRI1YDL216C YJR120WP47157 116 aa5.33□□□□□ -1.56
RRI1YDL216C SLD3P53135 668 aa5.33□□□□□ -1.56
RRI1YDL216C COG6P53959 839 aa5.33□□□□□ -1.56
RRI1YDL216C FDC1Q03034 503 aa5.33□□□□□ -1.56
RRI1YDL216C TAF3Q12297 353 aa5.33□□□□□ -1.56
RRI1YDL216C HCA4P20448 770 aaKnown RBP5.32□□□□□ -1.56
RRI1YDL216C SER1P33330 395 aaKnown RBP5.32□□□□□ -1.56
RRI1YDL216C SET3P36124 751 aa5.32□□□□□ -1.56
RRI1YDL216C HLR1Q04429 423 aa5.32□□□□□ -1.56
RRI1YDL216C BMS1Q08965 1183 aaKnown RBP5.32□□□□□ -1.56
RRI1YDL216C COX11P19516 300 aaKnown RBP5.31□□□□□ -1.56
RRI1YDL216C HXT4P32467 576 aa5.31□□□□□ -1.56
RRI1YDL216C MSS1P32559 526 aaPredicted RBP5.31□□□□□ -1.56
RRI1YDL216C GMH1P36125 273 aa5.31□□□□□ -1.56
RRI1YDL216C APL3P38065 1025 aa5.31□□□□□ -1.56
RRI1YDL216C SRP68P38687 599 aaKnown RBP5.31□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 1389 ms