RNA–Protein interactions for RNA: YDL025C

RTK1, Transcript of Putative protein kinase, potentially phosphorylated by Cdc28p, yeast

Gene RTK1, Length 1,863 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RTK1	YDL025C	ADP1	P25371	1049 aa		4.88	□□□□□ -1.63
RTK1	YDL025C	COQ2	P32378	372 aa		4.88	□□□□□ -1.63
RTK1	YDL025C	ATG19	P35193	415 aa		4.88	□□□□□ -1.63
RTK1	YDL025C	NDE1	P40215	560 aa		4.88	□□□□□ -1.63
RTK1	YDL025C	SMK1	P41808	388 aa		4.88	□□□□□ -1.63
RTK1	YDL025C	ENP2	P48234	707 aa	Known RBP	4.88	□□□□□ -1.63
RTK1	YDL025C	MEP3	P53390	489 aa		4.88	□□□□□ -1.63
RTK1	YDL025C	WHI4	Q07655	649 aa	Known RBP	4.88	□□□□□ -1.63
RTK1	YDL025C	VHS3	Q08438	674 aa		4.88	□□□□□ -1.63
RTK1	YDL025C	RTP1	Q12751	981 aa		4.88	□□□□□ -1.63
RTK1	YDL025C	VAS1	P07806	1104 aa	Known RBP	4.88	□□□□□ -1.63
RTK1	YDL025C	MF(ALPHA)2	P32435	120 aa		4.88	□□□□□ -1.63
RTK1	YDL025C	RRN3	P36070	627 aa		4.88	□□□□□ -1.63
RTK1	YDL025C	SKN7	P38889	622 aa		4.88	□□□□□ -1.63
RTK1	YDL025C	SPC72	P39723	622 aa		4.88	□□□□□ -1.63
RTK1	YDL025C	RAD26	P40352	1085 aa		4.88	□□□□□ -1.63
RTK1	YDL025C	MND2	P40577	368 aa		4.88	□□□□□ -1.63
RTK1	YDL025C	PUS4	P48567	403 aa	Known RBP	4.88	□□□□□ -1.63
RTK1	YDL025C	YDR215C	Q12240	137 aa		4.88	□□□□□ -1.63
RTK1	YDL025C	CLF1	Q12309	687 aa	Predicted RBP	4.88	□□□□□ -1.63
RTK1	YDL025C	NUC1	P08466	329 aa		4.87	□□□□□ -1.63
RTK1	YDL025C	CBP3	P21560	335 aa		4.87	□□□□□ -1.63
RTK1	YDL025C	LRG1	P35688	1017 aa		4.87	□□□□□ -1.63
RTK1	YDL025C	TAT1	P38085	619 aa		4.87	□□□□□ -1.63
RTK1	YDL025C	TAF5	P38129	798 aa		4.87	□□□□□ -1.63
RTK1	YDL025C	SWD1	P39706	426 aa		4.87	□□□□□ -1.63
RTK1	YDL025C	SLN1	P39928	1220 aa	Predicted RBP	4.87	□□□□□ -1.63
RTK1	YDL025C	MUS81	Q04149	632 aa	Predicted RBP	4.87	□□□□□ -1.63
RTK1	YDL025C	TSR2	Q06672	205 aa	Known RBP	4.87	□□□□□ -1.63
RTK1	YDL025C	CYC1	P00044	109 aa	Predicted RBP	4.86	□□□□□ -1.63
RTK1	YDL025C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
RTK1	YDL025C	SED4	P25365	1065 aa		4.86	□□□□□ -1.63
RTK1	YDL025C	HOS4	P40480	1083 aa		4.86	□□□□□ -1.63
RTK1	YDL025C	VHR1	P40522	640 aa		4.86	□□□□□ -1.63
RTK1	YDL025C	PFA3	P42836	336 aa		4.86	□□□□□ -1.63
RTK1	YDL025C	MRPL13	Q02204	264 aa		4.86	□□□□□ -1.63
RTK1	YDL025C	STP4	Q07351	490 aa		4.86	□□□□□ -1.63
RTK1	YDL025C	PDR15	Q04182	1529 aa	Known RBP	4.86	□□□□□ -1.63
RTK1	YDL025C	GAL10	P04397	699 aa		4.86	□□□□□ -1.63
RTK1	YDL025C	XRS2	P33301	854 aa		4.86	□□□□□ -1.63
RTK1	YDL025C	SLC1	P33333	303 aa		4.86	□□□□□ -1.63
RTK1	YDL025C	YHR033W	P38690	423 aa		4.86	□□□□□ -1.63
RTK1	YDL025C	KAP123	P40069	1113 aa	Known RBP	4.86	□□□□□ -1.63
RTK1	YDL025C	PRP31	P49704	494 aa	Predicted RBP	4.86	□□□□□ -1.63
RTK1	YDL025C	RTK1	Q12100	620 aa	Predicted RBP	4.86	□□□□□ -1.63
RTK1	YDL025C	GPR1	Q12361	961 aa		4.86	□□□□□ -1.63
RTK1	YDL025C	PHO5	P00635	467 aa		4.85	□□□□□ -1.63
RTK1	YDL025C	GCD1	P09032	578 aa	Predicted RBP	4.85	□□□□□ -1.63
RTK1	YDL025C	PYC1	P11154	1178 aa	Known RBP	4.85	□□□□□ -1.63
RTK1	YDL025C	SEG2	P34250	1132 aa		4.85	□□□□□ -1.63
RTK1	YDL025C	SSP120	P39931	234 aa	Known RBP	4.85	□□□□□ -1.63
RTK1	YDL025C	IMA5	P40884	581 aa		4.85	□□□□□ -1.63
RTK1	YDL025C	GTF1	P53260	183 aa	Predicted RBP	4.85	□□□□□ -1.63
RTK1	YDL025C	ARC35	P53731	342 aa	Known RBP	4.85	□□□□□ -1.63
RTK1	YDL025C	YMR187C	Q03236	431 aa		4.85	□□□□□ -1.63
RTK1	YDL025C	TPO1	Q07824	586 aa		4.85	□□□□□ -1.63
RTK1	YDL025C	SGO1	Q08490	590 aa		4.85	□□□□□ -1.63
RTK1	YDL025C	ERP4	Q12450	207 aa		4.85	□□□□□ -1.63
RTK1	YDL025C	TY1B-H	O13535	1793 aa		4.85	□□□□□ -1.63
RTK1	YDL025C	TY1B-DR5	P0C2I2	1755 aa		4.85	□□□□□ -1.63
RTK1	YDL025C	TY1B-DR6	P0C2I3	1755 aa		4.85	□□□□□ -1.63
RTK1	YDL025C	TY1B-LR2	P0C2I5	1755 aa		4.85	□□□□□ -1.63
RTK1	YDL025C	TY1B-LR3	P0C2I6	1755 aa	Known RBP	4.85	□□□□□ -1.63
RTK1	YDL025C	TY1B-PR1	P0C2I9	1755 aa	Known RBP	4.85	□□□□□ -1.63
RTK1	YDL025C	TY1B-PR2	P0C2J0	1756 aa		4.85	□□□□□ -1.63
RTK1	YDL025C	TY1B-PR3	P0C2J1	1755 aa	Known RBP	4.85	□□□□□ -1.63
RTK1	YDL025C	TY1B-JR1	P47098	1755 aa		4.85	□□□□□ -1.63
RTK1	YDL025C	TY1B-ML2	Q03434	1755 aa	Known RBP	4.85	□□□□□ -1.63
RTK1	YDL025C	TY1B-ER1	Q03612	1755 aa		4.85	□□□□□ -1.63
RTK1	YDL025C	TY1B-ML1	Q04711	1755 aa	Known RBP	4.85	□□□□□ -1.63
RTK1	YDL025C	TY1B-GR2	Q12269	1755 aa		4.85	□□□□□ -1.63
RTK1	YDL025C	TY1B-OL	Q12273	1755 aa		4.85	□□□□□ -1.63
RTK1	YDL025C	TY1B-PL	Q12414	1755 aa	Known RBP	4.85	□□□□□ -1.63
RTK1	YDL025C	MCM3	P24279	971 aa	Known RBP	4.84	□□□□□ -1.63
RTK1	YDL025C	PET127	P32606	800 aa		4.84	□□□□□ -1.63
RTK1	YDL025C	LAM1	P38851	1228 aa		4.84	□□□□□ -1.63
RTK1	YDL025C	PUG1	P40100	303 aa		4.84	□□□□□ -1.63
RTK1	YDL025C	FAF1	P40546	346 aa	Predicted RBP	4.84	□□□□□ -1.63
RTK1	YDL025C	MAD2	P40958	196 aa		4.84	□□□□□ -1.63
RTK1	YDL025C	UPC2	Q12151	913 aa		4.84	□□□□□ -1.63
RTK1	YDL025C	MED1	Q12321	566 aa		4.84	□□□□□ -1.63
RTK1	YDL025C	ENT1	Q12518	454 aa		4.84	□□□□□ -1.63
RTK1	YDL025C	FRS1	P15624	595 aa	Known RBP	4.83	□□□□□ -1.64
RTK1	YDL025C	PSF2	P40359	213 aa		4.83	□□□□□ -1.64
RTK1	YDL025C	MNT2	P53059	558 aa		4.83	□□□□□ -1.64
RTK1	YDL025C	COX18	P53239	316 aa		4.83	□□□□□ -1.64
RTK1	YDL025C	PKH1	Q03407	766 aa		4.83	□□□□□ -1.64
RTK1	YDL025C	SWM1	Q12379	170 aa		4.83	□□□□□ -1.64
RTK1	YDL025C	DBP10	Q12389	995 aa	Known RBP	4.83	□□□□□ -1.64
RTK1	YDL025C	YPR053C	Q6Q5F3	151 aa		4.83	□□□□□ -1.64
RTK1	YDL025C	FOB1	O13329	566 aa		4.83	□□□□□ -1.64
RTK1	YDL025C	MIS1	P09440	975 aa	Known RBP	4.83	□□□□□ -1.64
RTK1	YDL025C	POL3	P15436	1097 aa		4.83	□□□□□ -1.64
RTK1	YDL025C	NCP1	P16603	691 aa	Known RBP	4.83	□□□□□ -1.64
RTK1	YDL025C	ADE2	P21264	571 aa	Known RBP	4.83	□□□□□ -1.64
RTK1	YDL025C	CLB4	P24871	460 aa		4.83	□□□□□ -1.64
RTK1	YDL025C	IMP2'	P32351	346 aa		4.83	□□□□□ -1.64
RTK1	YDL025C	APL2	P36000	726 aa	Predicted RBP	4.83	□□□□□ -1.64
RTK1	YDL025C	MSS4	P38994	779 aa		4.83	□□□□□ -1.64
RTK1	YDL025C	STT3	P39007	718 aa	Known RBP	4.83	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 110.7 ms