RNA–Protein interactions for RNA: RDN18-2

RDN18-2, Transcript of 18S ribosomal RNA (18S rRNA), yeastyeast

Gene RDN18-2, Length 1,800 nt, Biotype rRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RDN18-2RDN18-2 YBL036CP38197 257 aa10.69□□□□□ -0.7
RDN18-2RDN18-2 PCM1P38628 557 aaKnown RBP10.69□□□□□ -0.7
RDN18-2RDN18-2 FLC2P39719 783 aa10.69□□□□□ -0.7
RDN18-2RDN18-2 SAW1P39735 261 aa10.69□□□□□ -0.7
RDN18-2RDN18-2 RGD2P43556 714 aa10.69□□□□□ -0.7
RDN18-2RDN18-2 SNU56Q03782 492 aaKnown RBP10.69□□□□□ -0.7
RDN18-2RDN18-2 PRM6Q04705 352 aa10.69□□□□□ -0.7
RDN18-2RDN18-2 THI7Q05998 598 aa10.69□□□□□ -0.7
RDN18-2RDN18-2 CDD1Q06549 142 aa10.69□□□□□ -0.7
RDN18-2RDN18-2 CMS1Q07897 291 aaKnown RBP10.69□□□□□ -0.7
RDN18-2RDN18-2 HVG1P0CE11 249 aa10.68□□□□□ -0.7
RDN18-2RDN18-2 PDR1P12383 1068 aa10.68□□□□□ -0.7
RDN18-2RDN18-2 OXP1P28273 1286 aa10.68□□□□□ -0.7
RDN18-2RDN18-2 EFB1P32471 206 aaKnown RBP10.68□□□□□ -0.7
RDN18-2RDN18-2 TFG1P41895 735 aaPredicted RBP10.68□□□□□ -0.7
RDN18-2RDN18-2 ALT1P52893 592 aa10.68□□□□□ -0.7
RDN18-2RDN18-2 SUB1P54000 292 aaKnown RBP10.68□□□□□ -0.7
RDN18-2RDN18-2 ELP3Q02908 557 aaKnown RBP10.68□□□□□ -0.7
RDN18-2RDN18-2 SXM1Q04175 944 aaKnown RBP10.68□□□□□ -0.7
RDN18-2RDN18-2 CDC73Q06697 393 aa10.68□□□□□ -0.7
RDN18-2RDN18-2 CHS1P08004 1131 aa10.68□□□□□ -0.7
RDN18-2RDN18-2 YMR085WP0CF18 432 aa10.68□□□□□ -0.7
RDN18-2RDN18-2 MRPL25P23369 157 aa10.68□□□□□ -0.7
RDN18-2RDN18-2 SEC1P30619 724 aaKnown RBP10.68□□□□□ -0.7
RDN18-2RDN18-2 AGP2P38090 596 aa10.68□□□□□ -0.7
RDN18-2RDN18-2 HEK2P38199 381 aaKnown RBP RIP-Chip data10.68□□□□□ -0.7not detected
RDN18-2RDN18-2 SWC5P38326 303 aa10.68□□□□□ -0.7
RDN18-2RDN18-2 MND1P53102 219 aa10.68□□□□□ -0.7
RDN18-2RDN18-2 FAP7Q12055 197 aaPredicted RBP10.68□□□□□ -0.7
RDN18-2RDN18-2 YPR027CQ12079 277 aa10.68□□□□□ -0.7
RDN18-2RDN18-2 TY3A-GQ12173 290 aa10.68□□□□□ -0.7
RDN18-2RDN18-2 TY3A-IQ99219 290 aa10.68□□□□□ -0.7
RDN18-2RDN18-2 ADE4P04046 510 aaKnown RBP10.67□□□□□ -0.7
RDN18-2RDN18-2 PRP4P20053 465 aaKnown RBP10.67□□□□□ -0.7
RDN18-2RDN18-2 SLY1P22213 666 aa10.67□□□□□ -0.7
RDN18-2RDN18-2 MEI4P29467 408 aa10.67□□□□□ -0.7
RDN18-2RDN18-2 NIP1P32497 812 aaKnown RBP10.67□□□□□ -0.7
RDN18-2RDN18-2 SPC97P38863 823 aa10.67□□□□□ -0.7
RDN18-2RDN18-2 RPT2P40327 437 aaKnown RBP10.67□□□□□ -0.7
RDN18-2RDN18-2 YNL040WP53960 456 aaPredicted RBP10.67□□□□□ -0.7
RDN18-2RDN18-2 CDC55Q00362 526 aa10.67□□□□□ -0.7
RDN18-2RDN18-2 YML119WQ03208 357 aa10.67□□□□□ -0.7
RDN18-2RDN18-2 VPS16Q03308 798 aa10.67□□□□□ -0.7
RDN18-2RDN18-2 YRR1Q12172 810 aa10.67□□□□□ -0.7
RDN18-2RDN18-2 ATG11Q12527 1178 aa10.67□□□□□ -0.7
RDN18-2RDN18-2 VBA3P25594 458 aa10.66□□□□□ -0.7
RDN18-2RDN18-2 YCR015CP25616 317 aa10.66□□□□□ -0.7
RDN18-2RDN18-2 VBA5P36172 582 aa10.66□□□□□ -0.7
RDN18-2RDN18-2 YMC2P38087 329 aa10.66□□□□□ -0.7
RDN18-2RDN18-2 YLR177WQ06251 628 aa10.66□□□□□ -0.7
RDN18-2RDN18-2 AIM39Q08223 395 aa10.66□□□□□ -0.7
RDN18-2RDN18-2 PUT4P15380 627 aa10.65□□□□□ -0.7
RDN18-2RDN18-2 GLN3P18494 730 aa10.65□□□□□ -0.7
RDN18-2RDN18-2 MSR1P38714 643 aa10.65□□□□□ -0.7
RDN18-2RDN18-2 OAF1P39720 1047 aaPredicted RBP10.65□□□□□ -0.7
RDN18-2RDN18-2 YIL054WP40524 105 aa10.65□□□□□ -0.7
RDN18-2RDN18-2 SPR3P41901 512 aa10.65□□□□□ -0.7
RDN18-2RDN18-2 UBX4P54730 416 aa10.65□□□□□ -0.7
RDN18-2RDN18-2 YPL109CQ02981 657 aa10.65□□□□□ -0.7
RDN18-2RDN18-2 ARO80Q04052 950 aa10.65□□□□□ -0.7
RDN18-2RDN18-2 DIS3Q08162 1001 aaKnown RBP10.65□□□□□ -0.7
RDN18-2RDN18-2 TRE1Q08919 783 aa10.65□□□□□ -0.7
RDN18-2RDN18-2 VPS54Q12071 889 aa10.65□□□□□ -0.7
RDN18-2RDN18-2 SAT4P25333 603 aaKnown RBP10.65□□□□□ -0.71
RDN18-2RDN18-2 KAR4P25583 335 aa10.65□□□□□ -0.71
RDN18-2RDN18-2 CDC20P26309 610 aa10.65□□□□□ -0.71
RDN18-2RDN18-2 HXT3P32466 567 aaKnown RBP10.65□□□□□ -0.71
RDN18-2RDN18-2 ABZ1P37254 787 aaPredicted RBP10.65□□□□□ -0.71
RDN18-2RDN18-2 SMF2P38778 549 aa10.65□□□□□ -0.71
RDN18-2RDN18-2 YHR054CP38780 354 aa10.65□□□□□ -0.71
RDN18-2RDN18-2 RSC30P38781 883 aa10.65□□□□□ -0.71
RDN18-2RDN18-2 EMW1P42842 904 aaKnown RBP10.65□□□□□ -0.71
RDN18-2RDN18-2 SAE2P46946 345 aa10.65□□□□□ -0.71
RDN18-2RDN18-2 TMA22P47089 198 aaPredicted RBP10.65□□□□□ -0.71
RDN18-2RDN18-2 HLJ1P48353 224 aa10.65□□□□□ -0.71
RDN18-2RDN18-2 MSC2Q03455 724 aa10.65□□□□□ -0.71
RDN18-2RDN18-2 SHE9Q04172 456 aa10.65□□□□□ -0.71
RDN18-2RDN18-2 MAG2Q06436 670 aaKnown RBP10.65□□□□□ -0.71
RDN18-2RDN18-2 PCD1Q12524 340 aa10.65□□□□□ -0.71
RDN18-2RDN18-2 SSA4P22202 642 aaKnown RBP10.64□□□□□ -0.71
RDN18-2RDN18-2 NOP4P37838 685 aaKnown RBP10.64□□□□□ -0.71
RDN18-2RDN18-2 APN2P38207 520 aa10.64□□□□□ -0.71
RDN18-2RDN18-2 NMA111P53920 997 aa10.64□□□□□ -0.71
RDN18-2RDN18-2 CWC21Q03375 135 aaKnown RBP10.64□□□□□ -0.71
RDN18-2RDN18-2 AVL9Q12500 764 aa10.64□□□□□ -0.71
RDN18-2RDN18-2 ILS1P09436 1072 aaKnown RBP10.63□□□□□ -0.71
RDN18-2RDN18-2 PSE1P32337 1089 aaKnown RBP10.63□□□□□ -0.71
RDN18-2RDN18-2 MVD1P32377 396 aaKnown RBP10.63□□□□□ -0.71
RDN18-2RDN18-2 TIM23P32897 222 aa10.63□□□□□ -0.71
RDN18-2RDN18-2 HEL1P36113 551 aa10.63□□□□□ -0.71
RDN18-2RDN18-2 SET3P36124 751 aa10.63□□□□□ -0.71
RDN18-2RDN18-2 APE3P37302 537 aaKnown RBP10.63□□□□□ -0.71
RDN18-2RDN18-2 BSD2P38356 321 aa10.63□□□□□ -0.71
RDN18-2RDN18-2 GEM1P39722 662 aa10.63□□□□□ -0.71
RDN18-2RDN18-2 YER186CP40101 306 aa10.63□□□□□ -0.71
RDN18-2RDN18-2 PFK26P40433 827 aaKnown RBP10.63□□□□□ -0.71
RDN18-2RDN18-2 MZM1Q03429 123 aaPredicted RBP10.63□□□□□ -0.71
RDN18-2RDN18-2 DOT1Q04089 582 aaKnown RBP10.63□□□□□ -0.71
RDN18-2RDN18-2 ADE13Q05911 482 aaKnown RBP10.63□□□□□ -0.71
RDN18-2RDN18-2 TEF1P02994 458 aaKnown RBP10.63□□□□□ -0.71
Retrieved 100 of 5,963 RNA–protein pairs in 29.6 ms