RNA–Protein interactions for RNA: ENST00000607632.1

PRDM16-210, Transcript of PR/SET domain 16, humanhuman

TSL 2

Gene PRDM16, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-210ENST00000607632 GGA3Q9NZ52 723 aa17.85■□□□□ 0.45
PRDM16-210ENST00000607632 THSD7BQ9C0I4 1608 aa17.84■□□□□ 0.45
PRDM16-210ENST00000607632 WNT10BO00744 389 aa17.84■□□□□ 0.45
PRDM16-210ENST00000607632 IFIT1P09914 478 aaKnown RBP17.84■□□□□ 0.45
PRDM16-210ENST00000607632 SCARF1Q14162 830 aa17.84■□□□□ 0.45
PRDM16-210ENST00000607632 FBXW7Q969H0 707 aa17.84■□□□□ 0.45
PRDM16-210ENST00000607632 RCAN3Q9UKA8 241 aa17.84■□□□□ 0.45
PRDM16-210ENST00000607632 MYH13Q9UKX3 1938 aa17.83■□□□□ 0.44
PRDM16-210ENST00000607632 PNMA6EA0A0J9YXQ4 647 aa17.83■□□□□ 0.44
PRDM16-210ENST00000607632 POLA2Q14181 598 aa17.83■□□□□ 0.44
PRDM16-210ENST00000607632 CAVIN4Q5BKX8 364 aa17.83■□□□□ 0.44
PRDM16-210ENST00000607632 KRT26Q7Z3Y9 468 aa17.83■□□□□ 0.44
PRDM16-210ENST00000607632 USP48Q86UV5 1035 aa17.83■□□□□ 0.44
PRDM16-210ENST00000607632 KIAA0825Q8IV33 1275 aa17.83■□□□□ 0.44
PRDM16-210ENST00000607632 DCPSQ96C86 337 aaKnown RBP17.83■□□□□ 0.44
PRDM16-210ENST00000607632 SIL1Q9H173 461 aa17.83■□□□□ 0.44
PRDM16-210ENST00000607632 CEP126Q9P2H0 1117 aa17.83■□□□□ 0.44
PRDM16-210ENST00000607632 HDAC9Q9UKV0 1011 aa17.83■□□□□ 0.44
PRDM16-210ENST00000607632 MS4A1P11836 297 aa17.82■□□□□ 0.44
PRDM16-210ENST00000607632 SLC5A1P13866 664 aa17.82■□□□□ 0.44
PRDM16-210ENST00000607632 NBPF9Q3BBW0 867 aa17.82■□□□□ 0.44
PRDM16-210ENST00000607632 ANGEL2Q5VTE6 544 aaKnown RBP17.82■□□□□ 0.44
PRDM16-210ENST00000607632 SSH3Q8TE77 659 aa17.82■□□□□ 0.44
PRDM16-210ENST00000607632 TLL2Q9Y6L7 1015 aa17.82■□□□□ 0.44
PRDM16-210ENST00000607632 BCAMP50895 628 aa17.81■□□□□ 0.44
PRDM16-210ENST00000607632 ATP2B3Q16720 1220 aa17.81■□□□□ 0.44
PRDM16-210ENST00000607632 ITPRIPQ8IWB1 547 aa17.81■□□□□ 0.44
PRDM16-210ENST00000607632 HHIPL1Q96JK4 782 aa17.81■□□□□ 0.44
PRDM16-210ENST00000607632 ADM5C9JUS6 153 aa17.8■□□□□ 0.44
PRDM16-210ENST00000607632 CELF2O95319 508 aaKnown RBP17.8■□□□□ 0.44
PRDM16-210ENST00000607632 ATP8B2P98198 1209 aa17.8■□□□□ 0.44
PRDM16-210ENST00000607632 MFSD14BQ5SR56 506 aa17.8■□□□□ 0.44
PRDM16-210ENST00000607632 SAPCD2Q86UD0 394 aa17.8■□□□□ 0.44
PRDM16-210ENST00000607632 SULF1Q8IWU6 871 aa17.8■□□□□ 0.44
PRDM16-210ENST00000607632 PANK1Q8TE04 598 aa17.8■□□□□ 0.44
PRDM16-210ENST00000607632 MKRN1Q9UHC7 482 aaKnown RBP17.8■□□□□ 0.44
PRDM16-210ENST00000607632 COL1A1P02452 1464 aaPredicted RBP17.8■□□□□ 0.44
PRDM16-210ENST00000607632 DEFB115Q30KQ5 88 aa17.79■□□□□ 0.44
PRDM16-210ENST00000607632 DLK2Q6UY11 383 aa17.79■□□□□ 0.44
PRDM16-210ENST00000607632 VPS37DQ86XT2 251 aa17.79■□□□□ 0.44
PRDM16-210ENST00000607632 TBC1D22AQ8WUA7 517 aa17.79■□□□□ 0.44
PRDM16-210ENST00000607632 JAG2Q9Y219 1238 aa17.79■□□□□ 0.44
PRDM16-210ENST00000607632 PCNTO95613 3336 aa17.79■□□□□ 0.44
PRDM16-210ENST00000607632 MVPQ14764 893 aaKnown RBP17.78■□□□□ 0.44
PRDM16-210ENST00000607632 SUGT1Q9Y2Z0 365 aa17.78■□□□□ 0.44
PRDM16-210ENST00000607632 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.78■□□□□ 0.44
PRDM16-210ENST00000607632 PAPPA2Q9BXP8 1791 aa17.77■□□□□ 0.44
PRDM16-210ENST00000607632 SPDYE2BA6NHP3 402 aa17.77■□□□□ 0.44
PRDM16-210ENST00000607632 SPDYE6P0CI01 402 aa17.77■□□□□ 0.44
PRDM16-210ENST00000607632 VEGFBP49765 207 aa17.77■□□□□ 0.44
PRDM16-210ENST00000607632 HDLBPQ00341 1268 aaKnown RBP17.77■□□□□ 0.44
PRDM16-210ENST00000607632 DLGAP5Q15398 846 aa17.77■□□□□ 0.44
PRDM16-210ENST00000607632 CDCA5Q96FF9 252 aa17.77■□□□□ 0.44
PRDM16-210ENST00000607632 MRIQ9BWK5 157 aa17.77■□□□□ 0.44
PRDM16-210ENST00000607632 SERPINA10Q9UK55 444 aa17.77■□□□□ 0.44
PRDM16-210ENST00000607632 ABT1Q9ULW3 272 aaKnown RBP17.77■□□□□ 0.44
PRDM16-210ENST00000607632 IQSEC3Q9UPP2 1182 aaPredicted RBP17.77■□□□□ 0.44
PRDM16-210ENST00000607632 NOP58Q9Y2X3 529 aaKnown RBP17.77■□□□□ 0.44
PRDM16-210ENST00000607632 SEMA3EO15041 775 aa17.76■□□□□ 0.43
PRDM16-210ENST00000607632 TFCP2Q12800 502 aa17.76■□□□□ 0.43
PRDM16-210ENST00000607632 PDE3AQ14432 1141 aa17.76■□□□□ 0.43
PRDM16-210ENST00000607632 GRIK5Q16478 980 aa17.76■□□□□ 0.43
PRDM16-210ENST00000607632 CFAP100Q494V2 611 aa17.76■□□□□ 0.43
PRDM16-210ENST00000607632 CEP85Q6P2H3 762 aa17.76■□□□□ 0.43
PRDM16-210ENST00000607632 C1orf115Q9H7X2 142 aa17.76■□□□□ 0.43
PRDM16-210ENST00000607632 AKAP2Q9Y2D5 859 aa17.76■□□□□ 0.43
PRDM16-210ENST00000607632 PCDHAC2Q9Y5I4 1007 aa17.76■□□□□ 0.43
PRDM16-210ENST00000607632 PDS5AQ29RF7 1337 aaKnown RBP17.75■□□□□ 0.43
PRDM16-210ENST00000607632 SALL1Q9NSC2 1324 aa17.75■□□□□ 0.43
PRDM16-210ENST00000607632 A0A1B0GUL7 405 aa17.75■□□□□ 0.43
PRDM16-210ENST00000607632 PHKA1P46020 1223 aa17.75■□□□□ 0.43
PRDM16-210ENST00000607632 APOBEC3FQ8IUX4 373 aaKnown RBP17.75■□□□□ 0.43
PRDM16-210ENST00000607632 PRMT6Q96LA8 375 aaPredicted RBP17.75■□□□□ 0.43
PRDM16-210ENST00000607632 GBA2Q9HCG7 927 aaPredicted RBP17.75■□□□□ 0.43
PRDM16-210ENST00000607632 GPR108Q9NPR9 543 aa17.75■□□□□ 0.43
PRDM16-210ENST00000607632 DDX19BQ9UMR2 479 aa17.75■□□□□ 0.43
PRDM16-210ENST00000607632 TTF2Q9UNY4 1162 aaKnown RBP17.75■□□□□ 0.43
PRDM16-210ENST00000607632 WDR33Q9C0J8 1336 aaKnown RBP17.74■□□□□ 0.43
PRDM16-210ENST00000607632 F8W031 263 aaPredicted RBP17.74■□□□□ 0.43
PRDM16-210ENST00000607632 ADORA1P30542 326 aa17.74■□□□□ 0.43
PRDM16-210ENST00000607632 TIMM10P62072 90 aa17.74■□□□□ 0.43
PRDM16-210ENST00000607632 CHAF1AQ13111 956 aaPredicted RBP17.74■□□□□ 0.43
PRDM16-210ENST00000607632 CCDC102BQ68D86 513 aa17.74■□□□□ 0.43
PRDM16-210ENST00000607632 WDR66Q8TBY9 1149 aa17.74■□□□□ 0.43
PRDM16-210ENST00000607632 ZNF408Q9H9D4 720 aa17.74■□□□□ 0.43
PRDM16-210ENST00000607632 ZBTB40Q9NUA8 1239 aa17.74■□□□□ 0.43
PRDM16-210ENST00000607632 AOX1Q06278 1338 aa17.73■□□□□ 0.43
PRDM16-210ENST00000607632 FRAT2O75474 233 aaPredicted RBP17.73■□□□□ 0.43
PRDM16-210ENST00000607632 ECE1P42892 770 aa17.73■□□□□ 0.43
PRDM16-210ENST00000607632 FKBP1BP68106 108 aa17.73■□□□□ 0.43
PRDM16-210ENST00000607632 G3BP1Q13283 466 aaKnown RBP eCLIP17.73■□□□□ 0.43
PRDM16-210ENST00000607632 GNL3LQ9NVN8 582 aaKnown RBP17.73■□□□□ 0.43
PRDM16-210ENST00000607632 COG6Q9Y2V7 657 aa17.73■□□□□ 0.43
PRDM16-210ENST00000607632 CRKP46108 304 aa17.72■□□□□ 0.43
PRDM16-210ENST00000607632 SPDYE2Q495Y8 402 aa17.72■□□□□ 0.43
PRDM16-210ENST00000607632 COL13A1Q5TAT6 717 aaPredicted RBP17.72■□□□□ 0.43
PRDM16-210ENST00000607632 C2orf69Q8N8R5 385 aa17.72■□□□□ 0.43
PRDM16-210ENST00000607632 XAGE2Q96GT9 111 aa17.72■□□□□ 0.43
PRDM16-210ENST00000607632 CAPNS2Q96L46 248 aa17.72■□□□□ 0.43
PRDM16-210ENST00000607632 DENND2AQ9ULE3 1009 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms