RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 SPINK5Q9NQ38 1064 aaPredicted RBP22.22■■□□□ 1.15
SHKBP1-203ENST00000594298 TBC1D8O95759 1140 aa22.21■■□□□ 1.15
SHKBP1-203ENST00000594298 SREBF2Q12772 1141 aa22.21■■□□□ 1.15
SHKBP1-203ENST00000594298 PKN2Q16513 984 aaKnown RBP22.21■■□□□ 1.15
SHKBP1-203ENST00000594298 CCDC57Q2TAC2 916 aa22.21■■□□□ 1.15
SHKBP1-203ENST00000594298 LMBR1LQ6UX01 489 aa22.21■■□□□ 1.15
SHKBP1-203ENST00000594298 CFHR5Q9BXR6 569 aa22.21■■□□□ 1.15
SHKBP1-203ENST00000594298 DEFB129Q9H1M3 183 aa22.21■■□□□ 1.15
SHKBP1-203ENST00000594298 CHMP3Q9Y3E7 222 aa22.21■■□□□ 1.15
SHKBP1-203ENST00000594298 PPP2R3BQ9Y5P8 575 aa22.21■■□□□ 1.15
SHKBP1-203ENST00000594298 GRM8O00222 908 aa22.2■■□□□ 1.14
SHKBP1-203ENST00000594298 MAP3K11Q16584 847 aa22.2■■□□□ 1.14
SHKBP1-203ENST00000594298 EPHA10Q5JZY3 1008 aa22.2■■□□□ 1.14
SHKBP1-203ENST00000594298 ZNF296Q8WUU4 475 aaPredicted RBP22.2■■□□□ 1.14
SHKBP1-203ENST00000594298 SLC34A2O95436 690 aa22.19■■□□□ 1.14
SHKBP1-203ENST00000594298 LDHAL6AQ6ZMR3 332 aa22.19■■□□□ 1.14
SHKBP1-203ENST00000594298 ANGEL1Q9UNK9 670 aaKnown RBP22.19■■□□□ 1.14
SHKBP1-203ENST00000594298 ALDH1L1O75891 902 aa22.18■■□□□ 1.14
SHKBP1-203ENST00000594298 MKRN3Q13064 507 aaKnown RBP22.18■■□□□ 1.14
SHKBP1-203ENST00000594298 PRKG1Q13976 671 aa22.18■■□□□ 1.14
SHKBP1-203ENST00000594298 SPRYD7Q5W111 196 aa22.18■■□□□ 1.14
SHKBP1-203ENST00000594298 SPDYE2BA6NHP3 402 aa22.17■■□□□ 1.14
SHKBP1-203ENST00000594298 UNCXA6NJT0 531 aa22.17■■□□□ 1.14
SHKBP1-203ENST00000594298 GPR25O00155 361 aa22.17■■□□□ 1.14
SHKBP1-203ENST00000594298 MYO1BO43795 1136 aa22.17■■□□□ 1.14
SHKBP1-203ENST00000594298 SPDYE6P0CI01 402 aa22.17■■□□□ 1.14
SHKBP1-203ENST00000594298 CFAP100Q494V2 611 aa22.17■■□□□ 1.14
SHKBP1-203ENST00000594298 TAF7LQ5H9L4 462 aa22.17■■□□□ 1.14
SHKBP1-203ENST00000594298 ZNF594Q96JF6 807 aaPredicted RBP22.17■■□□□ 1.14
SHKBP1-203ENST00000594298 HPS5Q9UPZ3 1129 aa22.17■■□□□ 1.14
SHKBP1-203ENST00000594298 SOX10P56693 466 aa22.16■■□□□ 1.14
SHKBP1-203ENST00000594298 SLFN5Q08AF3 891 aa22.16■■□□□ 1.14
SHKBP1-203ENST00000594298 CNNM1Q9NRU3 951 aa22.16■■□□□ 1.14
SHKBP1-203ENST00000594298 C9orf78Q9NZ63 289 aaPredicted RBP22.16■■□□□ 1.14
SHKBP1-203ENST00000594298 PCDHAC2Q9Y5I4 1007 aa22.16■■□□□ 1.14
SHKBP1-203ENST00000594298 A0A1B0GUL6 1792 aa22.16■■□□□ 1.14
SHKBP1-203ENST00000594298 FAM205AQ6ZU69 1335 aa22.15■■□□□ 1.14
SHKBP1-203ENST00000594298 F8W031 263 aaPredicted RBP22.15■■□□□ 1.14
SHKBP1-203ENST00000594298 INHBEP58166 350 aa22.15■■□□□ 1.14
SHKBP1-203ENST00000594298 PRMT6Q96LA8 375 aaPredicted RBP22.15■■□□□ 1.14
SHKBP1-203ENST00000594298 SRCIN1Q9C0H9 1055 aa22.15■■□□□ 1.14
SHKBP1-203ENST00000594298 SSC5DA1L4H1 1573 aa22.15■■□□□ 1.14
SHKBP1-203ENST00000594298 MANSC4A6NHS7 340 aaPredicted RBP22.14■■□□□ 1.13
SHKBP1-203ENST00000594298 PPP1R12BO60237 982 aaPredicted RBP22.14■■□□□ 1.13
SHKBP1-203ENST00000594298 ALDH1A1P00352 501 aa22.14■■□□□ 1.13
SHKBP1-203ENST00000594298 ZBTB48P10074 688 aaPredicted RBP22.14■■□□□ 1.13
SHKBP1-203ENST00000594298 UBE4AQ14139 1066 aa22.14■■□□□ 1.13
SHKBP1-203ENST00000594298 SUPT20HL1Q3ZLR7 823 aa22.14■■□□□ 1.13
SHKBP1-203ENST00000594298 FZD1Q9UP38 647 aa22.14■■□□□ 1.13
SHKBP1-203ENST00000594298 CLRN2A0PK11 232 aa22.13■■□□□ 1.13
SHKBP1-203ENST00000594298 PLIN1O60240 522 aa22.13■■□□□ 1.13
SHKBP1-203ENST00000594298 TDRD7Q8NHU6 1098 aaKnown RBP22.13■■□□□ 1.13
SHKBP1-203ENST00000594298 SLC10A4Q96EP9 437 aa22.13■■□□□ 1.13
SHKBP1-203ENST00000594298 FKTNO75072 461 aa22.12■■□□□ 1.13
SHKBP1-203ENST00000594298 SLC4A10Q6U841 1118 aa22.12■■□□□ 1.13
SHKBP1-203ENST00000594298 KAZALD1Q96I82 304 aa22.12■■□□□ 1.13
SHKBP1-203ENST00000594298 JAG2Q9Y219 1238 aa22.12■■□□□ 1.13
SHKBP1-203ENST00000594298 UTYO14607 1347 aa22.11■■□□□ 1.13
SHKBP1-203ENST00000594298 AOX1Q06278 1338 aa22.11■■□□□ 1.13
SHKBP1-203ENST00000594298 FBXO46Q6PJ61 603 aaPredicted RBP22.11■■□□□ 1.13
SHKBP1-203ENST00000594298 SUCLG2Q96I99 432 aa22.11■■□□□ 1.13
SHKBP1-203ENST00000594298 WNK4Q96J92 1243 aa22.11■■□□□ 1.13
SHKBP1-203ENST00000594298 R3HDMLQ9H3Y0 253 aa22.11■■□□□ 1.13
SHKBP1-203ENST00000594298 HIBADHP31937 336 aaKnown RBP22.1■■□□□ 1.13
SHKBP1-203ENST00000594298 MFSD14BQ5SR56 506 aa22.1■■□□□ 1.13
SHKBP1-203ENST00000594298 NBPF12Q5TAG4 269 aaPredicted RBP22.1■■□□□ 1.13
SHKBP1-203ENST00000594298 IFNL1Q8IU54 200 aa22.1■■□□□ 1.13
SHKBP1-203ENST00000594298 CLMNQ96JQ2 1002 aa22.1■■□□□ 1.13
SHKBP1-203ENST00000594298 VEZTQ9HBM0 779 aa22.1■■□□□ 1.13
SHKBP1-203ENST00000594298 SERPINA10Q9UK55 444 aa22.1■■□□□ 1.13
SHKBP1-203ENST00000594298 RIPOR2Q9Y4F9 1068 aa22.1■■□□□ 1.13
SHKBP1-203ENST00000594298 NBPF7P0C2Y1 421 aaPredicted RBP22.09■■□□□ 1.13
SHKBP1-203ENST00000594298 RBM5P52756 815 aaKnown RBP eCLIP22.09■■□□□ 1.13
SHKBP1-203ENST00000594298 HNRNPUQ00839 825 aaKnown RBP eCLIP22.09■■□□□ 1.13
SHKBP1-203ENST00000594298 TNFAIP1Q13829 316 aa22.09■■□□□ 1.13
SHKBP1-203ENST00000594298 RASA3Q14644 834 aa22.09■■□□□ 1.13
SHKBP1-203ENST00000594298 CDCA7LQ96GN5 454 aa22.09■■□□□ 1.13
SHKBP1-203ENST00000594298 FAM84BQ96KN1 310 aaPredicted RBP22.09■■□□□ 1.13
SHKBP1-203ENST00000594298 PUS3Q9BZE2 481 aaKnown RBP22.09■■□□□ 1.13
SHKBP1-203ENST00000594298 MROH5Q6ZUA9 1318 aa22.08■■□□□ 1.13
SHKBP1-203ENST00000594298 ECM29Q5VYK3 1845 aa22.08■■□□□ 1.13
SHKBP1-203ENST00000594298 GYG1P46976 350 aa22.08■■□□□ 1.13
SHKBP1-203ENST00000594298 IREB2P48200 963 aaKnown RBP22.08■■□□□ 1.13
SHKBP1-203ENST00000594298 RABL6Q3YEC7 729 aaPredicted RBP22.08■■□□□ 1.13
SHKBP1-203ENST00000594298 SPDYE2Q495Y8 402 aa22.08■■□□□ 1.13
SHKBP1-203ENST00000594298 TRMT2AQ8IZ69 625 aaKnown RBP22.08■■□□□ 1.13
SHKBP1-203ENST00000594298 TTF2Q9UNY4 1162 aaKnown RBP22.08■■□□□ 1.13
SHKBP1-203ENST00000594298 USP2O75604 605 aaPredicted RBP22.07■■□□□ 1.12
SHKBP1-203ENST00000594298 ANKRD13AQ8IZ07 590 aa22.07■■□□□ 1.12
SHKBP1-203ENST00000594298 ZNF70Q9UC06 446 aaPredicted RBP22.07■■□□□ 1.12
SHKBP1-203ENST00000594298 IGF2BP3O00425 579 aaKnown RBP eCLIP22.06■■□□□ 1.12
SHKBP1-203ENST00000594298 CT47B1P0C2W7 299 aaPredicted RBP22.06■■□□□ 1.12
SHKBP1-203ENST00000594298 FBXO33Q7Z6M2 555 aa22.05■■□□□ 1.12
SHKBP1-203ENST00000594298 BICC1Q9H694 974 aaKnown RBP22.05■■□□□ 1.12
SHKBP1-203ENST00000594298 TNRC18O15417 2968 aaPredicted RBP22.05■■□□□ 1.12
SHKBP1-203ENST00000594298 LAMB1P07942 1786 aa22.04■■□□□ 1.12
SHKBP1-203ENST00000594298 TESPA1A2RU30 521 aaPredicted RBP22.04■■□□□ 1.12
SHKBP1-203ENST00000594298 GJA5P36382 358 aa22.04■■□□□ 1.12
SHKBP1-203ENST00000594298 DZIP1LQ8IYY4 767 aaKnown RBP22.04■■□□□ 1.12
SHKBP1-203ENST00000594298 MRPL50Q8N5N7 158 aaKnown RBP22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms