RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 EDN3P14138 238 aa8.19□□□□□ -1.1
SMCHD1-205ENST00000581383 SSTR4P31391 388 aa8.19□□□□□ -1.1
SMCHD1-205ENST00000581383 PIP4K2BP78356 416 aa8.19□□□□□ -1.1
SMCHD1-205ENST00000581383 FKBP4Q02790 459 aaKnown RBP eCLIP8.19□□□□□ -1.1
SMCHD1-205ENST00000581383 FDX2Q6P4F2 183 aa8.19□□□□□ -1.1
SMCHD1-205ENST00000581383 XKR5Q6UX68 686 aa8.19□□□□□ -1.1
SMCHD1-205ENST00000581383 SLC51AQ86UW1 340 aa8.19□□□□□ -1.1
SMCHD1-205ENST00000581383 KLHDC7BQ96G42 594 aa8.19□□□□□ -1.1
SMCHD1-205ENST00000581383 OSMRQ99650 979 aa8.19□□□□□ -1.1
SMCHD1-205ENST00000581383 GAS2O43903 313 aaKnown RBP8.18□□□□□ -1.1
SMCHD1-205ENST00000581383 ACPPP15309 386 aa8.18□□□□□ -1.1
SMCHD1-205ENST00000581383 SF3B2Q13435 895 aaKnown RBP8.18□□□□□ -1.1
SMCHD1-205ENST00000581383 UBASH3BQ8TF42 649 aa8.18□□□□□ -1.1
SMCHD1-205ENST00000581383 KCNK4Q9NYG8 393 aa8.18□□□□□ -1.1
SMCHD1-205ENST00000581383 SALL4Q9UJQ4 1053 aa8.18□□□□□ -1.1
SMCHD1-205ENST00000581383 SNX29Q8TEQ0 813 aa8.17□□□□□ -1.1
SMCHD1-205ENST00000581383 WNT8BQ93098 351 aa8.17□□□□□ -1.1
SMCHD1-205ENST00000581383 UBL7Q96S82 380 aaPredicted RBP8.17□□□□□ -1.1
SMCHD1-205ENST00000581383 RUSC1Q9BVN2 902 aa8.17□□□□□ -1.1
SMCHD1-205ENST00000581383 ADAM19Q9H013 955 aa8.17□□□□□ -1.1
SMCHD1-205ENST00000581383 OSGEPQ9NPF4 335 aa8.17□□□□□ -1.1
SMCHD1-205ENST00000581383 DZANK1Q9NVP4 752 aa8.17□□□□□ -1.1
SMCHD1-205ENST00000581383 IGLV1-40P01703 118 aa8.16□□□□□ -1.1
SMCHD1-205ENST00000581383 C19orf57Q0VDD7 668 aa8.16□□□□□ -1.1
SMCHD1-205ENST00000581383 IKBKEQ14164 716 aa8.16□□□□□ -1.1
SMCHD1-205ENST00000581383 UVSSAQ2YD98 709 aa8.16□□□□□ -1.1
SMCHD1-205ENST00000581383 USP26Q9BXU7 913 aa8.16□□□□□ -1.1
SMCHD1-205ENST00000581383 RNF208Q9H0X6 261 aa8.16□□□□□ -1.1
SMCHD1-205ENST00000581383 EREGO14944 169 aa8.15□□□□□ -1.1
SMCHD1-205ENST00000581383 RXRBP28702 533 aa8.15□□□□□ -1.1
SMCHD1-205ENST00000581383 ECM1Q16610 540 aa8.15□□□□□ -1.1
SMCHD1-205ENST00000581383 ANKRD34AQ69YU3 496 aa8.15□□□□□ -1.1
SMCHD1-205ENST00000581383 BSNDQ8WZ55 320 aa8.15□□□□□ -1.1
SMCHD1-205ENST00000581383 TNFRSF21O75509 655 aa8.14□□□□□ -1.11
SMCHD1-205ENST00000581383 GRIK1P39086 918 aa8.14□□□□□ -1.11
SMCHD1-205ENST00000581383 Q6ZS46 218 aa8.14□□□□□ -1.11
SMCHD1-205ENST00000581383 KIAA1211Q6ZU35 1233 aa8.14□□□□□ -1.11
SMCHD1-205ENST00000581383 RGS22Q8NE09 1264 aa8.14□□□□□ -1.11
SMCHD1-205ENST00000581383 FOXD4L4Q8WXT5 416 aaPredicted RBP8.14□□□□□ -1.11
SMCHD1-205ENST00000581383 HHIPQ96QV1 700 aa8.14□□□□□ -1.11
SMCHD1-205ENST00000581383 FOXD3Q9UJU5 478 aaPredicted RBP8.14□□□□□ -1.11
SMCHD1-205ENST00000581383 AMOTL2Q9Y2J4 779 aa8.14□□□□□ -1.11
SMCHD1-205ENST00000581383 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.14□□□□□ -1.11
SMCHD1-205ENST00000581383 BMP3P12645 472 aa8.13□□□□□ -1.11
SMCHD1-205ENST00000581383 ARHGAP4P98171 946 aa8.13□□□□□ -1.11
SMCHD1-205ENST00000581383 NUTM2GQ5VZR2 741 aa8.13□□□□□ -1.11
SMCHD1-205ENST00000581383 ADAMTSL4Q6UY14 1074 aa8.13□□□□□ -1.11
SMCHD1-205ENST00000581383 TRIM42Q8IWZ5 723 aa8.13□□□□□ -1.11
SMCHD1-205ENST00000581383 TMEM102Q8N9M5 508 aaPredicted RBP8.13□□□□□ -1.11
SMCHD1-205ENST00000581383 C12orf50Q8NA57 414 aaPredicted RBP8.13□□□□□ -1.11
SMCHD1-205ENST00000581383 ZKSCAN3Q9BRR0 538 aa8.13□□□□□ -1.11
SMCHD1-205ENST00000581383 ADAM11O75078 769 aa8.12□□□□□ -1.11
SMCHD1-205ENST00000581383 NFIAQ12857 509 aa8.12□□□□□ -1.11
SMCHD1-205ENST00000581383 GIMAP7Q8NHV1 300 aa8.12□□□□□ -1.11
SMCHD1-205ENST00000581383 MYRFLQ96LU7 910 aa8.12□□□□□ -1.11
SMCHD1-205ENST00000581383 CHRDQ9H2X0 955 aa8.12□□□□□ -1.11
SMCHD1-205ENST00000581383 BRPF3Q9ULD4 1205 aa8.12□□□□□ -1.11
SMCHD1-205ENST00000581383 HMX2A2RU54 273 aa8.11□□□□□ -1.11
SMCHD1-205ENST00000581383 NPR3P17342 541 aa8.11□□□□□ -1.11
SMCHD1-205ENST00000581383 GSTM4Q03013 218 aa8.11□□□□□ -1.11
SMCHD1-205ENST00000581383 BEND4Q6ZU67 534 aa8.11□□□□□ -1.11
SMCHD1-205ENST00000581383 ARMC10Q8N2F6 343 aa8.11□□□□□ -1.11
SMCHD1-205ENST00000581383 TMC1Q8TDI8 760 aa8.11□□□□□ -1.11
SMCHD1-205ENST00000581383 NXPE3Q969Y0 559 aa8.11□□□□□ -1.11
SMCHD1-205ENST00000581383 C7orf69Q9H7B7 122 aa8.11□□□□□ -1.11
SMCHD1-205ENST00000581383 CYP4F12Q9HCS2 524 aa8.11□□□□□ -1.11
SMCHD1-205ENST00000581383 NFKBIEO00221 500 aa8.1□□□□□ -1.11
SMCHD1-205ENST00000581383 NEFLP07196 543 aa8.1□□□□□ -1.11
SMCHD1-205ENST00000581383 YBX3P16989 372 aaKnown RBP eCLIP8.1□□□□□ -1.11
SMCHD1-205ENST00000581383 USP11P51784 963 aa8.1□□□□□ -1.11
SMCHD1-205ENST00000581383 CLEC10AQ8IUN9 316 aa8.1□□□□□ -1.11
SMCHD1-205ENST00000581383 FAM46AQ96IP4 442 aaKnown RBP8.1□□□□□ -1.11
SMCHD1-205ENST00000581383 CCDC87Q9NVE4 849 aa8.1□□□□□ -1.11
SMCHD1-205ENST00000581383 SOX13Q9UN79 622 aa8.1□□□□□ -1.11
SMCHD1-205ENST00000581383 TGFB1P01137 390 aa8.09□□□□□ -1.11
SMCHD1-205ENST00000581383 POLR3DP05423 398 aaPredicted RBP8.09□□□□□ -1.11
SMCHD1-205ENST00000581383 MAPK1P28482 360 aa8.09□□□□□ -1.11
SMCHD1-205ENST00000581383 FAM20CQ8IXL6 584 aa8.09□□□□□ -1.11
SMCHD1-205ENST00000581383 DBNDD2Q9BQY9 259 aa8.09□□□□□ -1.11
SMCHD1-205ENST00000581383 SOX1O00570 391 aaPredicted RBP8.08□□□□□ -1.12
SMCHD1-205ENST00000581383 NDUFB5O43674 189 aa8.08□□□□□ -1.12
SMCHD1-205ENST00000581383 EIF4EBP3O60516 100 aaPredicted RBP8.08□□□□□ -1.12
SMCHD1-205ENST00000581383 PREPP48147 710 aa8.08□□□□□ -1.12
SMCHD1-205ENST00000581383 RNF43Q68DV7 783 aa8.08□□□□□ -1.12
SMCHD1-205ENST00000581383 DNAJC14Q6Y2X3 702 aaPredicted RBP8.08□□□□□ -1.12
SMCHD1-205ENST00000581383 LATS2Q9NRM7 1088 aa8.08□□□□□ -1.12
SMCHD1-205ENST00000581383 DCTN4Q9UJW0 460 aa8.08□□□□□ -1.12
SMCHD1-205ENST00000581383 HIF3AQ9Y2N7 669 aa8.08□□□□□ -1.12
SMCHD1-205ENST00000581383 FZD6O60353 706 aa8.07□□□□□ -1.12
SMCHD1-205ENST00000581383 HGSNATQ68CP4 663 aa8.07□□□□□ -1.12
SMCHD1-205ENST00000581383 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.07□□□□□ -1.12
SMCHD1-205ENST00000581383 DDX54Q8TDD1 881 aaKnown RBP8.07□□□□□ -1.12
SMCHD1-205ENST00000581383 FAM83CQ9BQN1 747 aa8.07□□□□□ -1.12
SMCHD1-205ENST00000581383 KRTAP4-9Q9BYQ8 210 aa8.07□□□□□ -1.12
SMCHD1-205ENST00000581383 ZFYVE28Q9HCC9 887 aa8.07□□□□□ -1.12
SMCHD1-205ENST00000581383 ATG3Q9NT62 314 aa8.07□□□□□ -1.12
SMCHD1-205ENST00000581383 WDR64B1ANS9 1081 aa8.06□□□□□ -1.12
SMCHD1-205ENST00000581383 MAP4P27816 1152 aaKnown RBP8.06□□□□□ -1.12
SMCHD1-205ENST00000581383 TXKP42681 527 aa8.06□□□□□ -1.12
SMCHD1-205ENST00000581383 NFKBIBQ15653 356 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms