RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 NOL7Q9UMY1 257 aaKnown RBP3.73□□□□□ -1.81
CHD9-216ENST00000565803 TTF2Q9UNY4 1162 aaKnown RBP3.73□□□□□ -1.81
CHD9-216ENST00000565803 SH3BP1Q9Y3L3 701 aa3.73□□□□□ -1.81
CHD9-216ENST00000565803 MRVI1Q9Y6F6 885 aa3.73□□□□□ -1.81
CHD9-216ENST00000565803 RGPD8O14715 1765 aaPredicted RBP3.73□□□□□ -1.81
CHD9-216ENST00000565803 RGPD5Q99666 1765 aa3.73□□□□□ -1.81
CHD9-216ENST00000565803 RBAK-RBAKDNI3L0D1 243 aa3.72□□□□□ -1.81
CHD9-216ENST00000565803 PPFIA3O75145 1194 aa3.72□□□□□ -1.81
CHD9-216ENST00000565803 TSPAN18Q96SJ8 248 aa3.72□□□□□ -1.81
CHD9-216ENST00000565803 LIMD1Q9UGP4 676 aa3.72□□□□□ -1.81
CHD9-216ENST00000565803 R3HCC1Q9Y3T6 440 aaKnown RBP3.72□□□□□ -1.81
CHD9-216ENST00000565803 SPATA31A1Q5TZJ5 1347 aa3.72□□□□□ -1.81
CHD9-216ENST00000565803 CFAP65Q6ZU64 1925 aaKnown RBP3.72□□□□□ -1.81
CHD9-216ENST00000565803 KIF3BO15066 747 aa3.72□□□□□ -1.81
CHD9-216ENST00000565803 USP17L8P0C7I0 530 aa3.72□□□□□ -1.81
CHD9-216ENST00000565803 LCA5Q86VQ0 697 aa3.72□□□□□ -1.81
CHD9-216ENST00000565803 CKAP2LQ8IYA6 745 aa3.72□□□□□ -1.81
CHD9-216ENST00000565803 MYRIPQ8NFW9 859 aa3.72□□□□□ -1.81
CHD9-216ENST00000565803 ENOX1Q8TC92 643 aaKnown RBP3.72□□□□□ -1.81
CHD9-216ENST00000565803 CCDC47Q96A33 483 aaKnown RBP3.72□□□□□ -1.81
CHD9-216ENST00000565803 SCLT1Q96NL6 688 aa3.72□□□□□ -1.81
CHD9-216ENST00000565803 HOMER2Q9NSB8 354 aa3.72□□□□□ -1.81
CHD9-216ENST00000565803 DAAM1Q9Y4D1 1078 aa3.72□□□□□ -1.81
CHD9-216ENST00000565803 PRMT3O60678 531 aa3.72□□□□□ -1.81
CHD9-216ENST00000565803 SSBP05455 408 aaKnown RBP eCLIP3.72□□□□□ -1.81
CHD9-216ENST00000565803 RASA1P20936 1047 aa3.72□□□□□ -1.81
CHD9-216ENST00000565803 PTPREP23469 700 aa3.72□□□□□ -1.81
CHD9-216ENST00000565803 GTF2E1P29083 439 aaPredicted RBP3.72□□□□□ -1.81
CHD9-216ENST00000565803 PSMD2Q13200 908 aa3.72□□□□□ -1.81
CHD9-216ENST00000565803 IDI1Q13907 227 aa3.72□□□□□ -1.81
CHD9-216ENST00000565803 PRPF38BQ5VTL8 546 aaKnown RBP3.72□□□□□ -1.81
CHD9-216ENST00000565803 ZNF710Q8N1W2 664 aa3.72□□□□□ -1.81
CHD9-216ENST00000565803 ZNF454Q8N9F8 522 aa3.72□□□□□ -1.81
CHD9-216ENST00000565803 FLCNQ8NFG4 579 aa3.72□□□□□ -1.81
CHD9-216ENST00000565803 STAG1Q8WVM7 1258 aa3.72□□□□□ -1.81
CHD9-216ENST00000565803 MRGBPQ9NV56 204 aa3.72□□□□□ -1.81
CHD9-216ENST00000565803 FANCLQ9NW38 375 aa3.72□□□□□ -1.81
CHD9-216ENST00000565803 LZTS1Q9Y250 596 aa3.72□□□□□ -1.81
CHD9-216ENST00000565803 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.72□□□□□ -1.81
CHD9-216ENST00000565803 PDGFRBP09619 1106 aa3.71□□□□□ -1.81
CHD9-216ENST00000565803 NBPF7P0C2Y1 421 aaPredicted RBP3.71□□□□□ -1.81
CHD9-216ENST00000565803 HCLS1P14317 486 aaPredicted RBP3.71□□□□□ -1.81
CHD9-216ENST00000565803 HNRNPMP52272 730 aaKnown RBP eCLIP3.71□□□□□ -1.81
CHD9-216ENST00000565803 UBE4AQ14139 1066 aa3.71□□□□□ -1.81
CHD9-216ENST00000565803 RGL3Q3MIN7 710 aa3.71□□□□□ -1.81
CHD9-216ENST00000565803 ARMC3Q5W041 872 aa3.71□□□□□ -1.81
CHD9-216ENST00000565803 TRIM63Q969Q1 353 aa3.71□□□□□ -1.81
CHD9-216ENST00000565803 CFAP53Q96M91 514 aa3.71□□□□□ -1.81
CHD9-216ENST00000565803 FHDC1Q9C0D6 1143 aaPredicted RBP3.71□□□□□ -1.81
CHD9-216ENST00000565803 ATG3Q9NT62 314 aa3.71□□□□□ -1.81
CHD9-216ENST00000565803 NDUFB9Q9Y6M9 179 aa3.71□□□□□ -1.81
CHD9-216ENST00000565803 MYOM3Q5VTT5 1437 aa3.71□□□□□ -1.81
CHD9-216ENST00000565803 SORBS3O60504 671 aa3.71□□□□□ -1.82
CHD9-216ENST00000565803 MLLT1Q03111 559 aaPredicted RBP3.71□□□□□ -1.82
CHD9-216ENST00000565803 NEXNQ0ZGT2 675 aa3.71□□□□□ -1.82
CHD9-216ENST00000565803 RAPGEF1Q13905 1077 aa3.71□□□□□ -1.82
CHD9-216ENST00000565803 C21orf62-AS1Q17RA5 79 aa3.71□□□□□ -1.82
CHD9-216ENST00000565803 OTUD6BQ8N6M0 293 aa3.71□□□□□ -1.82
CHD9-216ENST00000565803 ATP6V1E2Q96A05 226 aa3.71□□□□□ -1.82
CHD9-216ENST00000565803 CEP63Q96MT8 703 aa3.71□□□□□ -1.82
CHD9-216ENST00000565803 HS3ST6Q96QI5 342 aa3.71□□□□□ -1.82
CHD9-216ENST00000565803 SCINQ9Y6U3 715 aa3.71□□□□□ -1.82
CHD9-216ENST00000565803 EP400Q96L91 3159 aa3.71□□□□□ -1.82
CHD9-216ENST00000565803 KANK1Q14678 1352 aa3.71□□□□□ -1.82
CHD9-216ENST00000565803 CFAP69A5D8W1 941 aa3.71□□□□□ -1.82
CHD9-216ENST00000565803 MAP3K7O43318 606 aa3.71□□□□□ -1.82
CHD9-216ENST00000565803 RRP9O43818 475 aaKnown RBP3.71□□□□□ -1.82
CHD9-216ENST00000565803 MYL1P05976 194 aa3.71□□□□□ -1.82
CHD9-216ENST00000565803 TRIM29Q14134 588 aa3.71□□□□□ -1.82
CHD9-216ENST00000565803 NBPF20Q3BBV1 942 aa3.71□□□□□ -1.82
CHD9-216ENST00000565803 HSP90AB3PQ58FF7 597 aa3.71□□□□□ -1.82
CHD9-216ENST00000565803 ZSCAN30Q86W11 494 aa3.71□□□□□ -1.82
CHD9-216ENST00000565803 RAVER1Q8IY67 606 aaKnown RBP3.71□□□□□ -1.82
CHD9-216ENST00000565803 PRR7Q8TB68 274 aa3.71□□□□□ -1.82
CHD9-216ENST00000565803 UCN2Q96RP3 112 aa3.71□□□□□ -1.82
CHD9-216ENST00000565803 LAMB4A4D0S4 1761 aa3.71□□□□□ -1.82
CHD9-216ENST00000565803 NSD3Q9BZ95 1437 aa3.7□□□□□ -1.82
CHD9-216ENST00000565803 FIBPO43427 364 aa3.7□□□□□ -1.82
CHD9-216ENST00000565803 TIMM44O43615 452 aa3.7□□□□□ -1.82
CHD9-216ENST00000565803 CDC45O75419 566 aa3.7□□□□□ -1.82
CHD9-216ENST00000565803 PHLDB3Q6NSJ2 640 aa3.7□□□□□ -1.82
CHD9-216ENST00000565803 BTN2A1Q7KYR7 527 aa3.7□□□□□ -1.82
CHD9-216ENST00000565803 MAATS1Q7Z4T9 603 aa3.7□□□□□ -1.82
CHD9-216ENST00000565803 ARL10Q8N8L6 244 aa3.7□□□□□ -1.82
CHD9-216ENST00000565803 TATDN2Q93075 761 aa3.7□□□□□ -1.82
CHD9-216ENST00000565803 GPR101Q96P66 508 aaPredicted RBP3.7□□□□□ -1.82
CHD9-216ENST00000565803 SRCAPQ6ZRS2 3230 aa3.7□□□□□ -1.82
CHD9-216ENST00000565803 CAND2O75155 1236 aa3.7□□□□□ -1.82
CHD9-216ENST00000565803 SKIP12755 728 aa3.7□□□□□ -1.82
CHD9-216ENST00000565803 LRRC41Q15345 812 aa3.7□□□□□ -1.82
CHD9-216ENST00000565803 QPCTQ16769 361 aa3.7□□□□□ -1.82
CHD9-216ENST00000565803 GRAMD1BQ3KR37 738 aa3.7□□□□□ -1.82
CHD9-216ENST00000565803 LARP1Q6PKG0 1096 aaKnown RBP3.7□□□□□ -1.82
CHD9-216ENST00000565803 DDX46Q7L014 1031 aaKnown RBP3.7□□□□□ -1.82
CHD9-216ENST00000565803 NUTM1Q86Y26 1132 aa3.7□□□□□ -1.82
CHD9-216ENST00000565803 RPUSD2Q8IZ73 545 aaKnown RBP3.7□□□□□ -1.82
CHD9-216ENST00000565803 ANKRD42Q8N9B4 389 aa3.7□□□□□ -1.82
CHD9-216ENST00000565803 NGDNQ8NEJ9 315 aaKnown RBP3.7□□□□□ -1.82
CHD9-216ENST00000565803 FAM200AQ8TCP9 573 aa3.7□□□□□ -1.82
CHD9-216ENST00000565803 PAIP2Q9BPZ3 127 aaKnown RBP3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms