RNA–Protein interactions for RNA: ENST00000520868.5

PABPC1-216, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-216ENST00000520868 RICTORQ6R327 1708 aa9.51□□□□□ -0.89
PABPC1-216ENST00000520868 TTC37Q6PGP7 1564 aa9.5□□□□□ -0.89
PABPC1-216ENST00000520868 ABL1P00519 1130 aa9.5□□□□□ -0.89
PABPC1-216ENST00000520868 CEBPAP49715 358 aaPredicted RBP9.5□□□□□ -0.89
PABPC1-216ENST00000520868 AAMPQ13685 434 aa9.5□□□□□ -0.89
PABPC1-216ENST00000520868 ZNF438Q7Z4V0 828 aa9.5□□□□□ -0.89
PABPC1-216ENST00000520868 TPSG1Q9NRR2 321 aa9.5□□□□□ -0.89
PABPC1-216ENST00000520868 CDK11AQ9UQ88 783 aaPredicted RBP9.5□□□□□ -0.89
PABPC1-216ENST00000520868 EFCAB5A4FU69 1503 aa9.5□□□□□ -0.89
PABPC1-216ENST00000520868 PDGFAP04085 211 aa9.49□□□□□ -0.89
PABPC1-216ENST00000520868 MTMR3Q13615 1198 aa9.49□□□□□ -0.89
PABPC1-216ENST00000520868 XKR5Q6UX68 686 aa9.49□□□□□ -0.89
PABPC1-216ENST00000520868 FMR1NBQ8N0W7 255 aaPredicted RBP9.49□□□□□ -0.89
PABPC1-216ENST00000520868 CACTIN-AS1Q8N1I8 211 aa9.49□□□□□ -0.89
PABPC1-216ENST00000520868 ELP3Q9H9T3 547 aa9.49□□□□□ -0.89
PABPC1-216ENST00000520868 EGFL7Q9UHF1 273 aa9.49□□□□□ -0.89
PABPC1-216ENST00000520868 HECW1Q76N89 1606 aa9.49□□□□□ -0.89
PABPC1-216ENST00000520868 MAGI2Q86UL8 1455 aa9.48□□□□□ -0.89
PABPC1-216ENST00000520868 C9orf172C9J069 976 aa9.48□□□□□ -0.89
PABPC1-216ENST00000520868 USP5P45974 858 aa9.48□□□□□ -0.89
PABPC1-216ENST00000520868 AFAP1Q8N556 730 aa9.48□□□□□ -0.89
PABPC1-216ENST00000520868 RETREG2Q8NC44 543 aa9.48□□□□□ -0.89
PABPC1-216ENST00000520868 CFAP74Q9C0B2 1584 aa9.48□□□□□ -0.89
PABPC1-216ENST00000520868 ATP10AO60312 1499 aa9.47□□□□□ -0.89
PABPC1-216ENST00000520868 ZMYM4Q5VZL5 1548 aa9.47□□□□□ -0.89
PABPC1-216ENST00000520868 CYP2E1P05181 493 aaPredicted RBP9.47□□□□□ -0.89
PABPC1-216ENST00000520868 C8orf34Q49A92 452 aa9.47□□□□□ -0.89
PABPC1-216ENST00000520868 GDF6Q6KF10 455 aaPredicted RBP9.47□□□□□ -0.89
PABPC1-216ENST00000520868 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.47□□□□□ -0.89
PABPC1-216ENST00000520868 SIGLEC1Q9BZZ2 1709 aa9.46□□□□□ -0.89
PABPC1-216ENST00000520868 DEAF1O75398 565 aaPredicted RBP9.46□□□□□ -0.9
PABPC1-216ENST00000520868 KIF4AO95239 1232 aa9.46□□□□□ -0.9
PABPC1-216ENST00000520868 NRG1Q02297 640 aaPredicted RBP9.46□□□□□ -0.9
PABPC1-216ENST00000520868 EHHADHQ08426 723 aa9.46□□□□□ -0.9
PABPC1-216ENST00000520868 ADGRE1Q14246 886 aa9.46□□□□□ -0.9
PABPC1-216ENST00000520868 MBTPS1Q14703 1052 aa9.46□□□□□ -0.9
PABPC1-216ENST00000520868 RSPO4Q2I0M5 234 aaPredicted RBP9.46□□□□□ -0.9
PABPC1-216ENST00000520868 SEMA6BQ9H3T3 888 aa9.46□□□□□ -0.9
PABPC1-216ENST00000520868 TMEM63CQ9P1W3 806 aa9.46□□□□□ -0.9
PABPC1-216ENST00000520868 FMN1Q68DA7 1419 aa9.46□□□□□ -0.9
PABPC1-216ENST00000520868 A6NHS1 94 aa9.45□□□□□ -0.9
PABPC1-216ENST00000520868 ATP11AP98196 1134 aa9.45□□□□□ -0.9
PABPC1-216ENST00000520868 ZNF211Q13398 564 aaPredicted RBP9.45□□□□□ -0.9
PABPC1-216ENST00000520868 ADAMTSL4Q6UY14 1074 aa9.45□□□□□ -0.9
PABPC1-216ENST00000520868 FBXO11Q86XK2 927 aa9.45□□□□□ -0.9
PABPC1-216ENST00000520868 DCAF11Q8TEB1 546 aa9.45□□□□□ -0.9
PABPC1-216ENST00000520868 PMEPA1Q969W9 287 aa9.45□□□□□ -0.9
PABPC1-216ENST00000520868 LENG1Q96BZ8 264 aaPredicted RBP9.45□□□□□ -0.9
PABPC1-216ENST00000520868 MUC3BQ9H195 1237 aa9.45□□□□□ -0.9
PABPC1-216ENST00000520868 POLIQ9UNA4 740 aa9.45□□□□□ -0.9
PABPC1-216ENST00000520868 TRIM33Q9UPN9 1127 aa9.45□□□□□ -0.9
PABPC1-216ENST00000520868 ARHGAP35Q9NRY4 1499 aa9.45□□□□□ -0.9
PABPC1-216ENST00000520868 SMNDC1O75940 238 aaKnown RBP eCLIP9.44□□□□□ -0.9
PABPC1-216ENST00000520868 NKAPLQ5M9Q1 402 aa9.44□□□□□ -0.9
PABPC1-216ENST00000520868 NCAPG2Q86XI2 1143 aa9.44□□□□□ -0.9
PABPC1-216ENST00000520868 GGNBP2Q9H3C7 697 aa9.44□□□□□ -0.9
PABPC1-216ENST00000520868 SRA1Q9HD15 236 aaKnown RBP9.44□□□□□ -0.9
PABPC1-216ENST00000520868 ANO2Q9NQ90 1003 aa9.44□□□□□ -0.9
PABPC1-216ENST00000520868 C9orf84Q5VXU9 1444 aa9.44□□□□□ -0.9
PABPC1-216ENST00000520868 ICMTO60725 284 aa9.43□□□□□ -0.9
PABPC1-216ENST00000520868 MAP4K3Q8IVH8 894 aa9.43□□□□□ -0.9
PABPC1-216ENST00000520868 IL22RA1Q8N6P7 574 aa9.43□□□□□ -0.9
PABPC1-216ENST00000520868 ARHGAP5Q13017 1502 aa9.42□□□□□ -0.9
PABPC1-216ENST00000520868 TROQ12816 1431 aaPredicted RBP9.42□□□□□ -0.9
PABPC1-216ENST00000520868 CES1P23141 567 aa9.42□□□□□ -0.9
PABPC1-216ENST00000520868 GLYCTKQ8IVS8 523 aa9.42□□□□□ -0.9
PABPC1-216ENST00000520868 CNTN3Q9P232 1028 aa9.42□□□□□ -0.9
PABPC1-216ENST00000520868 KANSL3Q9P2N6 904 aa9.42□□□□□ -0.9
PABPC1-216ENST00000520868 USP21Q9UK80 565 aa9.42□□□□□ -0.9
PABPC1-216ENST00000520868 ARHGEF12Q9NZN5 1544 aa9.41□□□□□ -0.9
PABPC1-216ENST00000520868 CLIP1P30622 1438 aa9.41□□□□□ -0.9
PABPC1-216ENST00000520868 H3BRB1 525 aa9.41□□□□□ -0.9
PABPC1-216ENST00000520868 FZD6O60353 706 aa9.41□□□□□ -0.9
PABPC1-216ENST00000520868 CEP135Q66GS9 1140 aa9.41□□□□□ -0.9
PABPC1-216ENST00000520868 TUT1Q9H6E5 874 aaKnown RBP9.41□□□□□ -0.9
PABPC1-216ENST00000520868 FER1L4A9Z1Z3 1794 aa9.41□□□□□ -0.9
PABPC1-216ENST00000520868 KIF14Q15058 1648 aa9.41□□□□□ -0.9
PABPC1-216ENST00000520868 ZNF518AQ6AHZ1 1483 aa9.4□□□□□ -0.9
PABPC1-216ENST00000520868 FAM177BA6PVY3 158 aa9.4□□□□□ -0.9
PABPC1-216ENST00000520868 ACPPP15309 386 aa9.4□□□□□ -0.9
PABPC1-216ENST00000520868 SERPINB4P48594 390 aa9.4□□□□□ -0.9
PABPC1-216ENST00000520868 IGF2-ASQ6U949 168 aa9.4□□□□□ -0.9
PABPC1-216ENST00000520868 TXNRD3Q86VQ6 643 aa9.4□□□□□ -0.9
PABPC1-216ENST00000520868 CEP120Q8N960 986 aa9.4□□□□□ -0.9
PABPC1-216ENST00000520868 C1orf127Q8N9H9 656 aa9.4□□□□□ -0.9
PABPC1-216ENST00000520868 SNX29Q8TEQ0 813 aa9.4□□□□□ -0.9
PABPC1-216ENST00000520868 PBX4Q9BYU1 374 aa9.4□□□□□ -0.9
PABPC1-216ENST00000520868 RASSF4Q9H2L5 321 aa9.4□□□□□ -0.9
PABPC1-216ENST00000520868 SALL4Q9UJQ4 1053 aa9.4□□□□□ -0.9
PABPC1-216ENST00000520868 PPME1Q9Y570 386 aa9.4□□□□□ -0.9
PABPC1-216ENST00000520868 MYO5CQ9NQX4 1742 aa9.39□□□□□ -0.91
PABPC1-216ENST00000520868 TXNDC11Q6PKC3 985 aa9.39□□□□□ -0.91
PABPC1-216ENST00000520868 GJD3Q8N144 294 aa9.39□□□□□ -0.91
PABPC1-216ENST00000520868 CCER1Q8TC90 406 aaPredicted RBP9.39□□□□□ -0.91
PABPC1-216ENST00000520868 LACRTQ9GZZ8 138 aa9.39□□□□□ -0.91
PABPC1-216ENST00000520868 UHRF1BP1Q6BDS2 1440 aa9.39□□□□□ -0.91
PABPC1-216ENST00000520868 TRAPPC8Q9Y2L5 1435 aa9.39□□□□□ -0.91
PABPC1-216ENST00000520868 DLL1O00548 723 aa9.38□□□□□ -0.91
PABPC1-216ENST00000520868 DYRK3O43781 588 aa9.38□□□□□ -0.91
PABPC1-216ENST00000520868 PHACTR2O75167 634 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms