RNA–Protein interactions for RNA: ENST00000517525.1

PVT1-204, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 392 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-204ENST00000517525 WNT10BO00744 389 aa30.71■■■□□ 2.51
PVT1-204ENST00000517525 ANGEL2Q5VTE6 544 aaKnown RBP30.71■■■□□ 2.51
PVT1-204ENST00000517525 SAPCD2Q86UD0 394 aa30.71■■■□□ 2.51
PVT1-204ENST00000517525 KIAA0825Q8IV33 1275 aa30.71■■■□□ 2.51
PVT1-204ENST00000517525 TMEM57Q8N5G2 664 aa30.71■■■□□ 2.51
PVT1-204ENST00000517525 CLUAP1Q96AJ1 413 aa30.71■■■□□ 2.51
PVT1-204ENST00000517525 CAVIN4Q5BKX8 364 aa30.7■■■□□ 2.51
PVT1-204ENST00000517525 GNAI2P04899 355 aa30.69■■■□□ 2.5
PVT1-204ENST00000517525 IFIT1P09914 478 aaKnown RBP30.69■■■□□ 2.5
PVT1-204ENST00000517525 IL15P40933 162 aaPredicted RBP30.69■■■□□ 2.5
PVT1-204ENST00000517525 NBPF9Q3BBW0 867 aa30.69■■■□□ 2.5
PVT1-204ENST00000517525 LPIN2Q92539 896 aa30.69■■■□□ 2.5
PVT1-204ENST00000517525 ADM5C9JUS6 153 aa30.68■■■□□ 2.5
PVT1-204ENST00000517525 DZIP1LQ8IYY4 767 aaKnown RBP30.68■■■□□ 2.5
PVT1-204ENST00000517525 ZBTB22O15209 634 aa30.67■■■□□ 2.5
PVT1-204ENST00000517525 CEP126Q9P2H0 1117 aa30.67■■■□□ 2.5
PVT1-204ENST00000517525 POLR2AP24928 1970 aaKnown RBP30.66■■■□□ 2.5
PVT1-204ENST00000517525 ECE1P42892 770 aa30.66■■■□□ 2.5
PVT1-204ENST00000517525 VPS37DQ86XT2 251 aa30.66■■■□□ 2.5
PVT1-204ENST00000517525 SRGAP3O43295 1099 aa30.65■■■□□ 2.5
PVT1-204ENST00000517525 SLC5A1P13866 664 aa30.65■■■□□ 2.5
PVT1-204ENST00000517525 DLK2Q6UY11 383 aa30.65■■■□□ 2.5
PVT1-204ENST00000517525 WDR33Q9C0J8 1336 aaKnown RBP30.65■■■□□ 2.5
PVT1-204ENST00000517525 MFSD14BQ5SR56 506 aa30.64■■■□□ 2.5
PVT1-204ENST00000517525 FTSJ3Q8IY81 847 aaKnown RBP30.64■■■□□ 2.5
PVT1-204ENST00000517525 TBC1D22AQ8WUA7 517 aa30.64■■■□□ 2.5
PVT1-204ENST00000517525 SIL1Q9H173 461 aa30.64■■■□□ 2.5
PVT1-204ENST00000517525 PA2G4Q9UQ80 394 aaKnown RBP30.64■■■□□ 2.5
PVT1-204ENST00000517525 BCAMP50895 628 aa30.63■■■□□ 2.49
PVT1-204ENST00000517525 DLGAP5Q15398 846 aa30.63■■■□□ 2.49
PVT1-204ENST00000517525 CDCA5Q96FF9 252 aa30.63■■■□□ 2.49
PVT1-204ENST00000517525 CAPNS2Q96L46 248 aa30.63■■■□□ 2.49
PVT1-204ENST00000517525 ZNF408Q9H9D4 720 aa30.63■■■□□ 2.49
PVT1-204ENST00000517525 GBA2Q9HCG7 927 aaPredicted RBP30.63■■■□□ 2.49
PVT1-204ENST00000517525 RLBP1P12271 317 aa30.62■■■□□ 2.49
PVT1-204ENST00000517525 FKBP1BP68106 108 aa30.61■■■□□ 2.49
PVT1-204ENST00000517525 ATP2B3Q16720 1220 aa30.61■■■□□ 2.49
PVT1-204ENST00000517525 APOBEC3FQ8IUX4 373 aaKnown RBP30.61■■■□□ 2.49
PVT1-204ENST00000517525 C2orf69Q8N8R5 385 aa30.61■■■□□ 2.49
PVT1-204ENST00000517525 ZBTB7BO15156 539 aaPredicted RBP30.6■■■□□ 2.49
PVT1-204ENST00000517525 HSPA1AP0DMV8 641 aaKnown RBP30.6■■■□□ 2.49
PVT1-204ENST00000517525 HSPA1BP0DMV9 641 aaKnown RBP30.6■■■□□ 2.49
PVT1-204ENST00000517525 SERPINA10Q9UK55 444 aa30.6■■■□□ 2.49
PVT1-204ENST00000517525 JAG2Q9Y219 1238 aa30.6■■■□□ 2.49
PVT1-204ENST00000517525 SUGT1Q9Y2Z0 365 aa30.6■■■□□ 2.49
PVT1-204ENST00000517525 SPDYE2BA6NHP3 402 aa30.59■■■□□ 2.49
PVT1-204ENST00000517525 SPDYE6P0CI01 402 aa30.59■■■□□ 2.49
PVT1-204ENST00000517525 MS4A1P11836 297 aa30.59■■■□□ 2.49
PVT1-204ENST00000517525 CFAP100Q494V2 611 aa30.59■■■□□ 2.49
PVT1-204ENST00000517525 MRIQ9BWK5 157 aa30.59■■■□□ 2.49
PVT1-204ENST00000517525 MAP2K2P36507 400 aa30.58■■■□□ 2.49
PVT1-204ENST00000517525 HDLBPQ00341 1268 aaKnown RBP30.58■■■□□ 2.49
PVT1-204ENST00000517525 CYP4F22Q6NT55 531 aa30.58■■■□□ 2.49
PVT1-204ENST00000517525 WBP1LQ9NX94 342 aa30.58■■■□□ 2.49
PVT1-204ENST00000517525 F8W031 263 aaPredicted RBP30.57■■■□□ 2.48
PVT1-204ENST00000517525 HUNKP57058 714 aa30.57■■■□□ 2.48
PVT1-204ENST00000517525 TTF2Q9UNY4 1162 aaKnown RBP30.57■■■□□ 2.48
PVT1-204ENST00000517525 THSD7BQ9C0I4 1608 aa30.56■■■□□ 2.48
PVT1-204ENST00000517525 PNMA6EA0A0J9YXQ4 647 aa30.56■■■□□ 2.48
PVT1-204ENST00000517525 FRAT2O75474 233 aaPredicted RBP30.56■■■□□ 2.48
PVT1-204ENST00000517525 POLA2Q14181 598 aa30.56■■■□□ 2.48
PVT1-204ENST00000517525 ITPRIPQ8IWB1 547 aa30.56■■■□□ 2.48
PVT1-204ENST00000517525 PRMT6Q96LA8 375 aaPredicted RBP30.56■■■□□ 2.48
PVT1-204ENST00000517525 IQSEC3Q9UPP2 1182 aaPredicted RBP30.56■■■□□ 2.48
PVT1-204ENST00000517525 COL1A1P02452 1464 aaPredicted RBP30.56■■■□□ 2.48
PVT1-204ENST00000517525 ATP8B2P98198 1209 aa30.55■■■□□ 2.48
PVT1-204ENST00000517525 MAP2K1Q02750 393 aaPredicted RBP30.55■■■□□ 2.48
PVT1-204ENST00000517525 SSH3Q8TE77 659 aa30.55■■■□□ 2.48
PVT1-204ENST00000517525 AKAP2Q9Y2D5 859 aa30.55■■■□□ 2.48
PVT1-204ENST00000517525 SEMA3EO15041 775 aa30.54■■■□□ 2.48
PVT1-204ENST00000517525 MYO1BO43795 1136 aa30.54■■■□□ 2.48
PVT1-204ENST00000517525 WDR66Q8TBY9 1149 aa30.54■■■□□ 2.48
PVT1-204ENST00000517525 GNL3LQ9NVN8 582 aaKnown RBP30.54■■■□□ 2.48
PVT1-204ENST00000517525 PPP2R3BQ9Y5P8 575 aa30.54■■■□□ 2.48
PVT1-204ENST00000517525 CHAF1AQ13111 956 aaPredicted RBP30.53■■■□□ 2.48
PVT1-204ENST00000517525 RGMBQ6NW40 437 aa30.53■■■□□ 2.48
PVT1-204ENST00000517525 PAXIP1Q6ZW49 1069 aaPredicted RBP30.53■■■□□ 2.48
PVT1-204ENST00000517525 RCAN3Q9UKA8 241 aa30.53■■■□□ 2.48
PVT1-204ENST00000517525 PCDHAC2Q9Y5I4 1007 aa30.53■■■□□ 2.48
PVT1-204ENST00000517525 PCNTO95613 3336 aa30.53■■■□□ 2.48
PVT1-204ENST00000517525 ARAP2Q8WZ64 1704 aa30.53■■■□□ 2.48
PVT1-204ENST00000517525 TFCP2Q12800 502 aa30.51■■■□□ 2.47
PVT1-204ENST00000517525 GRIK5Q16478 980 aa30.51■■■□□ 2.47
PVT1-204ENST00000517525 CCDC102AQ96A19 550 aa30.51■■■□□ 2.47
PVT1-204ENST00000517525 DEFB129Q9H1M3 183 aa30.51■■■□□ 2.47
PVT1-204ENST00000517525 CRKP46108 304 aa30.5■■■□□ 2.47
PVT1-204ENST00000517525 NOGQ13253 232 aa30.5■■■□□ 2.47
PVT1-204ENST00000517525 G3BP1Q13283 466 aaKnown RBP eCLIP30.5■■■□□ 2.47
PVT1-204ENST00000517525 PANK1Q8TE04 598 aa30.5■■■□□ 2.47
PVT1-204ENST00000517525 SCAF8Q9UPN6 1271 aaKnown RBP30.5■■■□□ 2.47
PVT1-204ENST00000517525 MAST3O60307 1309 aa30.49■■■□□ 2.47
PVT1-204ENST00000517525 PAPPA2Q9BXP8 1791 aa30.49■■■□□ 2.47
PVT1-204ENST00000517525 NF2P35240 595 aa30.49■■■□□ 2.47
PVT1-204ENST00000517525 SPDYE2Q495Y8 402 aa30.49■■■□□ 2.47
PVT1-204ENST00000517525 DENND2AQ9ULE3 1009 aa30.49■■■□□ 2.47
PVT1-204ENST00000517525 PDS5AQ29RF7 1337 aaKnown RBP30.48■■■□□ 2.47
PVT1-204ENST00000517525 SALL1Q9NSC2 1324 aa30.48■■■□□ 2.47
PVT1-204ENST00000517525 A0A1B0GUL7 405 aa30.48■■■□□ 2.47
PVT1-204ENST00000517525 FAM155AB1AL88 458 aaPredicted RBP30.48■■■□□ 2.47
PVT1-204ENST00000517525 PHKA1P46020 1223 aa30.48■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms