RNA–Protein interactions for RNA: ENST00000497139.5

VEGFA-215, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 2,746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-215ENST00000497139 NUTM2FA1L443 756 aa14.94□□□□□ -0.02
VEGFA-215ENST00000497139 CUTAO60888 179 aa14.94□□□□□ -0.02
VEGFA-215ENST00000497139 UBASH3AP57075 661 aa14.94□□□□□ -0.02
VEGFA-215ENST00000497139 NUTM2GQ5VZR2 741 aa14.94□□□□□ -0.02
VEGFA-215ENST00000497139 USPL1Q5W0Q7 1092 aa14.94□□□□□ -0.02
VEGFA-215ENST00000497139 FOXR1Q6PIV2 292 aa14.94□□□□□ -0.02
VEGFA-215ENST00000497139 CTCFLQ8NI51 663 aaPredicted RBP14.94□□□□□ -0.02
VEGFA-215ENST00000497139 ANKZF1Q9H8Y5 726 aa14.94□□□□□ -0.02
VEGFA-215ENST00000497139 SLC3A2P08195 630 aaKnown RBP14.94□□□□□ -0.02
VEGFA-215ENST00000497139 STK3Q13188 491 aa14.94□□□□□ -0.02
VEGFA-215ENST00000497139 NMIQ13287 307 aaPredicted RBP14.94□□□□□ -0.02
VEGFA-215ENST00000497139 MCM6Q14566 821 aa14.94□□□□□ -0.02
VEGFA-215ENST00000497139 SART3Q15020 963 aaKnown RBP14.94□□□□□ -0.02
VEGFA-215ENST00000497139 CEP120Q8N960 986 aa14.94□□□□□ -0.02
VEGFA-215ENST00000497139 CNNM3Q8NE01 707 aa14.94□□□□□ -0.02
VEGFA-215ENST00000497139 CPS1P31327 1500 aa14.94□□□□□ -0.02
VEGFA-215ENST00000497139 DDX54Q8TDD1 881 aaKnown RBP14.94□□□□□ -0.02
VEGFA-215ENST00000497139 DHX58Q96C10 678 aa14.94□□□□□ -0.02
VEGFA-215ENST00000497139 PFKFB2O60825 505 aa14.93□□□□□ -0.02
VEGFA-215ENST00000497139 AARSP49588 968 aaKnown RBP eCLIP14.93□□□□□ -0.028e-9■□□□□ 10.9
VEGFA-215ENST00000497139 CEBPZQ03701 1054 aaKnown RBP14.93□□□□□ -0.02
VEGFA-215ENST00000497139 KCNG4Q8TDN1 519 aa14.93□□□□□ -0.02
VEGFA-215ENST00000497139 BAG1Q99933 345 aaPredicted RBP14.93□□□□□ -0.02
VEGFA-215ENST00000497139 A1CFQ9NQ94 594 aaKnown RBP14.93□□□□□ -0.02
VEGFA-215ENST00000497139 NEDD4P46934 1319 aa14.93□□□□□ -0.02
VEGFA-215ENST00000497139 ALDH1L1O75891 902 aa14.93□□□□□ -0.02
VEGFA-215ENST00000497139 MYL5Q02045 173 aa14.93□□□□□ -0.02
VEGFA-215ENST00000497139 CDC23Q9UJX2 597 aa14.93□□□□□ -0.02
VEGFA-215ENST00000497139 PCDHA7Q9UN72 937 aa14.93□□□□□ -0.02
VEGFA-215ENST00000497139 A0A087WWV3 80 aa14.92□□□□□ -0.02
VEGFA-215ENST00000497139 ERLIN2O94905 339 aa14.92□□□□□ -0.02
VEGFA-215ENST00000497139 YEATS4O95619 227 aa14.92□□□□□ -0.02
VEGFA-215ENST00000497139 TBX2Q13207 712 aaPredicted RBP14.92□□□□□ -0.02
VEGFA-215ENST00000497139 SERPINC1P01008 464 aa14.92□□□□□ -0.02
VEGFA-215ENST00000497139 OS9Q13438 667 aaPredicted RBP14.92□□□□□ -0.02
VEGFA-215ENST00000497139 CASP8Q14790 479 aa14.92□□□□□ -0.02
VEGFA-215ENST00000497139 POTEDQ86YR6 584 aa14.92□□□□□ -0.02
VEGFA-215ENST00000497139 NEK1Q96PY6 1258 aa14.92□□□□□ -0.02
VEGFA-215ENST00000497139 DNAJC5Q9H3Z4 198 aa14.92□□□□□ -0.02
VEGFA-215ENST00000497139 LMOD1P29536 600 aaPredicted RBP14.91□□□□□ -0.02
VEGFA-215ENST00000497139 CFAP100Q494V2 611 aa14.91□□□□□ -0.02
VEGFA-215ENST00000497139 CCDC12Q8WUD4 166 aaPredicted RBP14.91□□□□□ -0.02
VEGFA-215ENST00000497139 STAG1Q8WVM7 1258 aa14.91□□□□□ -0.02
VEGFA-215ENST00000497139 HSD3B7Q9H2F3 369 aa14.91□□□□□ -0.02
VEGFA-215ENST00000497139 MIS18AQ9NYP9 233 aa14.91□□□□□ -0.02
VEGFA-215ENST00000497139 NALCNQ8IZF0 1738 aa14.91□□□□□ -0.02
VEGFA-215ENST00000497139 MYCNP04198 464 aaPredicted RBP14.91□□□□□ -0.02
VEGFA-215ENST00000497139 HMGB1P09429 215 aaKnown RBP14.91□□□□□ -0.02
VEGFA-215ENST00000497139 NBPF6Q5VWK0 638 aa14.91□□□□□ -0.02
VEGFA-215ENST00000497139 MICALL1Q8N3F8 863 aa14.91□□□□□ -0.02
VEGFA-215ENST00000497139 NSUN7Q8NE18 718 aaKnown RBP14.91□□□□□ -0.02
VEGFA-215ENST00000497139 AFAP1L1Q8TED9 768 aa14.91□□□□□ -0.02
VEGFA-215ENST00000497139 NBPF4Q96M43 638 aa14.91□□□□□ -0.02
VEGFA-215ENST00000497139 FAM227BQ96M60 508 aa14.91□□□□□ -0.02
VEGFA-215ENST00000497139 NDUFA8P51970 172 aa14.9□□□□□ -0.02
VEGFA-215ENST00000497139 E2F4Q16254 413 aa14.9□□□□□ -0.02
VEGFA-215ENST00000497139 WAPLQ7Z5K2 1190 aa14.9□□□□□ -0.02
VEGFA-215ENST00000497139 CCDC102AQ96A19 550 aa14.9□□□□□ -0.02
VEGFA-215ENST00000497139 TCEANC2Q96MN5 208 aa14.9□□□□□ -0.02
VEGFA-215ENST00000497139 SENP3Q9H4L4 574 aaPredicted RBP14.9□□□□□ -0.02
VEGFA-215ENST00000497139 BICC1Q9H694 974 aaKnown RBP14.9□□□□□ -0.02
VEGFA-215ENST00000497139 FAM204AQ9H8W3 233 aa14.9□□□□□ -0.02
VEGFA-215ENST00000497139 ABCB6Q9NP58 842 aa14.9□□□□□ -0.02
VEGFA-215ENST00000497139 RFX7Q2KHR2 1363 aa14.9□□□□□ -0.02
VEGFA-215ENST00000497139 ATXN2Q99700 1313 aaKnown RBP14.9□□□□□ -0.02
VEGFA-215ENST00000497139 SHOX2O60902 331 aaPredicted RBP14.9□□□□□ -0.02
VEGFA-215ENST00000497139 HSP90B1P14625 803 aaKnown RBP14.9□□□□□ -0.02
VEGFA-215ENST00000497139 SATB1Q01826 763 aa14.9□□□□□ -0.02
VEGFA-215ENST00000497139 POLR3EQ9NVU0 708 aa14.9□□□□□ -0.02
VEGFA-215ENST00000497139 BCCIPQ9P287 314 aaKnown RBP eCLIP14.9□□□□□ -0.02
VEGFA-215ENST00000497139 TUBE1Q9UJT0 475 aa14.9□□□□□ -0.02
VEGFA-215ENST00000497139 SUFUQ9UMX1 484 aa14.9□□□□□ -0.02
VEGFA-215ENST00000497139 NCAPD2Q15021 1401 aa14.9□□□□□ -0.02
VEGFA-215ENST00000497139 MED1Q15648 1581 aaPredicted RBP14.89□□□□□ -0.03
VEGFA-215ENST00000497139 WDHD1O75717 1129 aaPredicted RBP14.89□□□□□ -0.03
VEGFA-215ENST00000497139 MCM3P25205 808 aa14.89□□□□□ -0.03
VEGFA-215ENST00000497139 SCRN1Q12765 414 aa14.89□□□□□ -0.03
VEGFA-215ENST00000497139 SF3B2Q13435 895 aaKnown RBP14.89□□□□□ -0.03
VEGFA-215ENST00000497139 AEBP2Q6ZN18 517 aaPredicted RBP14.89□□□□□ -0.03
VEGFA-215ENST00000497139 Q6ZUG5 572 aa14.89□□□□□ -0.03
VEGFA-215ENST00000497139 FAM177A1Q8N128 213 aaPredicted RBP14.89□□□□□ -0.03
VEGFA-215ENST00000497139 ZRANB1Q9UGI0 708 aa14.89□□□□□ -0.03
VEGFA-215ENST00000497139 KDRP35968 1356 aa14.89□□□□□ -0.03
VEGFA-215ENST00000497139 SALL1Q9NSC2 1324 aa14.89□□□□□ -0.03
VEGFA-215ENST00000497139 N4BP1O75113 896 aaKnown RBP14.89□□□□□ -0.03
VEGFA-215ENST00000497139 CCDC175P0C221 793 aa14.89□□□□□ -0.03
VEGFA-215ENST00000497139 WDR93Q6P2C0 686 aa14.89□□□□□ -0.03
VEGFA-215ENST00000497139 FTOQ9C0B1 505 aaKnown RBP eCLIP14.89□□□□□ -0.03
VEGFA-215ENST00000497139 A0A1B0GVL5 298 aa14.88□□□□□ -0.03
VEGFA-215ENST00000497139 PIP4K2BP78356 416 aa14.88□□□□□ -0.03
VEGFA-215ENST00000497139 SETQ01105 290 aaPredicted RBP14.88□□□□□ -0.03
VEGFA-215ENST00000497139 LINC00301Q8NCQ3 95 aa14.88□□□□□ -0.03
VEGFA-215ENST00000497139 FBXW7Q969H0 707 aa14.88□□□□□ -0.03
VEGFA-215ENST00000497139 FMNL2Q96PY5 1086 aa14.88□□□□□ -0.03
VEGFA-215ENST00000497139 PNKPQ96T60 521 aa14.88□□□□□ -0.03
VEGFA-215ENST00000497139 CARD10Q9BWT7 1032 aa14.88□□□□□ -0.03
VEGFA-215ENST00000497139 A0A0D9SFI3 127 aa14.88□□□□□ -0.03
VEGFA-215ENST00000497139 ATP1A3P13637 1013 aa14.88□□□□□ -0.03
VEGFA-215ENST00000497139 COL9A3Q14050 684 aaPredicted RBP14.88□□□□□ -0.03
VEGFA-215ENST00000497139 WHAMMP3Q1A5X7 153 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms