RNA–Protein interactions for RNA: ENST00000490332.2

PTPRK-213, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 612 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-213ENST00000490332 SSH1Q8WYL5 1049 aa6.33□□□□□ -1.4
PTPRK-213ENST00000490332 PHOX2BQ99453 314 aa6.33□□□□□ -1.4
PTPRK-213ENST00000490332 RSPH6AQ9H0K4 717 aa6.33□□□□□ -1.4
PTPRK-213ENST00000490332 KIF20BQ96Q89 1820 aa6.33□□□□□ -1.4
PTPRK-213ENST00000490332 BRCA2P51587 3418 aa6.33□□□□□ -1.4
PTPRK-213ENST00000490332 RBBP6Q7Z6E9 1792 aaKnown RBP6.33□□□□□ -1.4
PTPRK-213ENST00000490332 LTN1O94822 1766 aa6.32□□□□□ -1.4
PTPRK-213ENST00000490332 TTC28Q96AY4 2481 aa6.32□□□□□ -1.4
PTPRK-213ENST00000490332 LOC102724428A0A0B4J2F2 783 aa6.32□□□□□ -1.4
PTPRK-213ENST00000490332 RFC4P35249 363 aa6.32□□□□□ -1.4
PTPRK-213ENST00000490332 SIK1P57059 783 aa6.32□□□□□ -1.4
PTPRK-213ENST00000490332 KCNMA1Q12791 1236 aa6.32□□□□□ -1.4
PTPRK-213ENST00000490332 INTS3Q68E01 1043 aaKnown RBP6.32□□□□□ -1.4
PTPRK-213ENST00000490332 KCTD17Q8N5Z5 321 aa6.32□□□□□ -1.4
PTPRK-213ENST00000490332 API5Q9BZZ5 524 aaKnown RBP6.32□□□□□ -1.4
PTPRK-213ENST00000490332 NOB1Q9ULX3 412 aaKnown RBP6.32□□□□□ -1.4
PTPRK-213ENST00000490332 PCDHB15Q9Y5E8 787 aa6.32□□□□□ -1.4
PTPRK-213ENST00000490332 SPTBN5Q9NRC6 3674 aaKnown RBP6.32□□□□□ -1.4
PTPRK-213ENST00000490332 PIEZO1Q92508 2521 aa6.32□□□□□ -1.4
PTPRK-213ENST00000490332 ITGB4P16144 1822 aa6.32□□□□□ -1.4
PTPRK-213ENST00000490332 KIF24Q5T7B8 1368 aa6.31□□□□□ -1.4
PTPRK-213ENST00000490332 TTC21AQ8NDW8 1320 aa6.31□□□□□ -1.4
PTPRK-213ENST00000490332 LAMA3Q16787 3333 aa6.31□□□□□ -1.4
PTPRK-213ENST00000490332 CAPN5O15484 640 aaPredicted RBP6.31□□□□□ -1.4
PTPRK-213ENST00000490332 ZNF853P0CG23 659 aa6.31□□□□□ -1.4
PTPRK-213ENST00000490332 DEKP35659 375 aaKnown RBP6.31□□□□□ -1.4
PTPRK-213ENST00000490332 FBXO46Q6PJ61 603 aaPredicted RBP6.31□□□□□ -1.4
PTPRK-213ENST00000490332 MPRIPQ6WCQ1 1025 aa6.31□□□□□ -1.4
PTPRK-213ENST00000490332 SMC5Q8IY18 1101 aa6.31□□□□□ -1.4
PTPRK-213ENST00000490332 TSR2Q969E8 191 aaKnown RBP6.31□□□□□ -1.4
PTPRK-213ENST00000490332 SNX27Q96L92 541 aa6.31□□□□□ -1.4
PTPRK-213ENST00000490332 TAOK3Q9H2K8 898 aa6.31□□□□□ -1.4
PTPRK-213ENST00000490332 USP31Q70CQ4 1352 aa6.31□□□□□ -1.4
PTPRK-213ENST00000490332 VAMP4O75379 141 aa6.3□□□□□ -1.4
PTPRK-213ENST00000490332 VSIG8P0DPA2 414 aa6.3□□□□□ -1.4
PTPRK-213ENST00000490332 RLBP1P12271 317 aa6.3□□□□□ -1.4
PTPRK-213ENST00000490332 TRIM27P14373 513 aa6.3□□□□□ -1.4
PTPRK-213ENST00000490332 Q3C1V9 767 aa6.3□□□□□ -1.4
PTPRK-213ENST00000490332 SOGA3Q5TF21 947 aa6.3□□□□□ -1.4
PTPRK-213ENST00000490332 CST9Q5W186 159 aa6.3□□□□□ -1.4
PTPRK-213ENST00000490332 ITPRIPQ8IWB1 547 aa6.3□□□□□ -1.4
PTPRK-213ENST00000490332 SULF1Q8IWU6 871 aa6.3□□□□□ -1.4
PTPRK-213ENST00000490332 ZFP42Q96MM3 310 aa6.3□□□□□ -1.4
PTPRK-213ENST00000490332 USB1Q9BQ65 265 aaKnown RBP6.3□□□□□ -1.4
PTPRK-213ENST00000490332 ZBTB40Q9NUA8 1239 aa6.3□□□□□ -1.4
PTPRK-213ENST00000490332 HDAC9Q9UKV0 1011 aa6.3□□□□□ -1.4
PTPRK-213ENST00000490332 TTC21BQ7Z4L5 1316 aa6.29□□□□□ -1.4
PTPRK-213ENST00000490332 PCDH11XQ9BZA7 1347 aa6.29□□□□□ -1.4
PTPRK-213ENST00000490332 PCDH11YQ9BZA8 1340 aa6.29□□□□□ -1.4
PTPRK-213ENST00000490332 GPR37O15354 613 aa6.29□□□□□ -1.4
PTPRK-213ENST00000490332 HTATSF1O43719 755 aaKnown RBP6.29□□□□□ -1.4
PTPRK-213ENST00000490332 GRIPAP1Q4V328 841 aa6.29□□□□□ -1.4
PTPRK-213ENST00000490332 NME9Q86XW9 330 aa6.29□□□□□ -1.4
PTPRK-213ENST00000490332 CCDC24Q8N4L8 307 aa6.29□□□□□ -1.4
PTPRK-213ENST00000490332 BCL2L13Q9BXK5 485 aa6.29□□□□□ -1.4
PTPRK-213ENST00000490332 CHMP4AQ9BY43 222 aa6.29□□□□□ -1.4
PTPRK-213ENST00000490332 STXBP5LQ9Y2K9 1186 aa6.29□□□□□ -1.4
PTPRK-213ENST00000490332 MAP3K19Q56UN5 1328 aa6.28□□□□□ -1.4
PTPRK-213ENST00000490332 A0A1W2PPC1 479 aa6.28□□□□□ -1.4
PTPRK-213ENST00000490332 H0YIN7 160 aa6.28□□□□□ -1.4
PTPRK-213ENST00000490332 POLRMTO00411 1230 aaKnown RBP6.28□□□□□ -1.4
PTPRK-213ENST00000490332 SEMA3EO15041 775 aa6.28□□□□□ -1.4
PTPRK-213ENST00000490332 TRPA1O75762 1119 aa6.28□□□□□ -1.4
PTPRK-213ENST00000490332 DDR1Q08345 913 aa6.28□□□□□ -1.4
PTPRK-213ENST00000490332 TWISTNBQ3B726 338 aaPredicted RBP6.28□□□□□ -1.4
PTPRK-213ENST00000490332 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.28□□□□□ -1.4
PTPRK-213ENST00000490332 TMEM57Q8N5G2 664 aa6.28□□□□□ -1.4
PTPRK-213ENST00000490332 PHACTR3Q96KR7 559 aa6.28□□□□□ -1.4
PTPRK-213ENST00000490332 RNF186Q9NXI6 227 aa6.28□□□□□ -1.4
PTPRK-213ENST00000490332 LAS1LQ9Y4W2 734 aaKnown RBP6.28□□□□□ -1.4
PTPRK-213ENST00000490332 EMILIN1Q9Y6C2 1016 aa6.28□□□□□ -1.4
PTPRK-213ENST00000490332 ZNF831Q5JPB2 1677 aa6.28□□□□□ -1.4
PTPRK-213ENST00000490332 MON2Q7Z3U7 1717 aa6.28□□□□□ -1.4
PTPRK-213ENST00000490332 SOS1Q07889 1333 aaPredicted RBP6.27□□□□□ -1.41
PTPRK-213ENST00000490332 CENPFP49454 3210 aa6.27□□□□□ -1.41
PTPRK-213ENST00000490332 ZBTB7BO15156 539 aaPredicted RBP6.27□□□□□ -1.41
PTPRK-213ENST00000490332 RPS6KA4O75676 772 aa6.27□□□□□ -1.41
PTPRK-213ENST00000490332 CELF2O95319 508 aaKnown RBP6.27□□□□□ -1.41
PTPRK-213ENST00000490332 HMOX1P09601 288 aa6.27□□□□□ -1.41
PTPRK-213ENST00000490332 LMOD1P29536 600 aaPredicted RBP6.27□□□□□ -1.41
PTPRK-213ENST00000490332 NUCB1Q02818 461 aa6.27□□□□□ -1.41
PTPRK-213ENST00000490332 ITPK1Q13572 414 aa6.27□□□□□ -1.41
PTPRK-213ENST00000490332 BICDL1Q6ZP65 573 aa6.27□□□□□ -1.41
PTPRK-213ENST00000490332 TBC1D32Q96NH3 1257 aa6.27□□□□□ -1.41
PTPRK-213ENST00000490332 BABAM1Q9NWV8 329 aa6.27□□□□□ -1.41
PTPRK-213ENST00000490332 MUC3AQ02505 3323 aa6.27□□□□□ -1.41
PTPRK-213ENST00000490332 NRXN2Q9P2S2 1712 aa6.27□□□□□ -1.41
PTPRK-213ENST00000490332 AFDNP55196 1824 aaKnown RBP6.27□□□□□ -1.41
PTPRK-213ENST00000490332 CNTNAP4Q9C0A0 1308 aa6.26□□□□□ -1.41
PTPRK-213ENST00000490332 PAPPA2Q9BXP8 1791 aa6.26□□□□□ -1.41
PTPRK-213ENST00000490332 SCN11AQ9UI33 1791 aa6.26□□□□□ -1.41
PTPRK-213ENST00000490332 H0YGN5 161 aa6.26□□□□□ -1.41
PTPRK-213ENST00000490332 CHL1O00533 1208 aa6.26□□□□□ -1.41
PTPRK-213ENST00000490332 C21orf2O43822 256 aa6.26□□□□□ -1.41
PTPRK-213ENST00000490332 NFKBIBQ15653 356 aa6.26□□□□□ -1.41
PTPRK-213ENST00000490332 RBM26Q5T8P6 1007 aaKnown RBP6.26□□□□□ -1.41
PTPRK-213ENST00000490332 USP50Q70EL3 339 aaPredicted RBP6.26□□□□□ -1.41
PTPRK-213ENST00000490332 CHD1LQ86WJ1 897 aa6.26□□□□□ -1.41
PTPRK-213ENST00000490332 SKAP1Q86WV1 359 aa6.26□□□□□ -1.41
PTPRK-213ENST00000490332 C2CD5Q86YS7 1000 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 121.2 ms