RNA–Protein interactions for RNA: ENST00000488910.1

ATG3-205, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 681 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-205ENST00000488910 NBPF9Q3BBW0 867 aa21.82■■□□□ 1.08
ATG3-205ENST00000488910 CAVIN4Q5BKX8 364 aa21.82■■□□□ 1.08
ATG3-205ENST00000488910 ZKSCAN2Q63HK3 967 aa21.82■■□□□ 1.08
ATG3-205ENST00000488910 DLK2Q6UY11 383 aa21.82■■□□□ 1.08
ATG3-205ENST00000488910 FBXO33Q7Z6M2 555 aa21.82■■□□□ 1.08
ATG3-205ENST00000488910 VPS37DQ86XT2 251 aa21.82■■□□□ 1.08
ATG3-205ENST00000488910 CERS5Q8N5B7 392 aa21.82■■□□□ 1.08
ATG3-205ENST00000488910 C2orf69Q8N8R5 385 aa21.82■■□□□ 1.08
ATG3-205ENST00000488910 PAXIP1Q6ZW49 1069 aaPredicted RBP21.81■■□□□ 1.08
ATG3-205ENST00000488910 GBA2Q9HCG7 927 aaPredicted RBP21.81■■□□□ 1.08
ATG3-205ENST00000488910 CIAO1O76071 339 aa21.8■■□□□ 1.08
ATG3-205ENST00000488910 IFIT1P09914 478 aaKnown RBP21.8■■□□□ 1.08
ATG3-205ENST00000488910 PUM3Q15397 648 aaKnown RBP21.8■■□□□ 1.08
ATG3-205ENST00000488910 CYP4F22Q6NT55 531 aa21.8■■□□□ 1.08
ATG3-205ENST00000488910 MTMR14Q8NCE2 650 aa21.8■■□□□ 1.08
ATG3-205ENST00000488910 ZBED3Q96IU2 234 aaPredicted RBP21.8■■□□□ 1.08
ATG3-205ENST00000488910 FGFR2P21802 821 aa21.79■■□□□ 1.08
ATG3-205ENST00000488910 MAP2K1Q02750 393 aaPredicted RBP21.79■■□□□ 1.08
ATG3-205ENST00000488910 DLGAP5Q15398 846 aa21.79■■□□□ 1.08
ATG3-205ENST00000488910 ATG9AQ7Z3C6 839 aa21.79■■□□□ 1.08
ATG3-205ENST00000488910 CDCA5Q96FF9 252 aa21.79■■□□□ 1.08
ATG3-205ENST00000488910 MAP2K2P36507 400 aa21.78■■□□□ 1.08
ATG3-205ENST00000488910 HUNKP57058 714 aa21.78■■□□□ 1.08
ATG3-205ENST00000488910 CLUAP1Q96AJ1 413 aa21.78■■□□□ 1.08
ATG3-205ENST00000488910 COPRSQ9NQ92 184 aa21.78■■□□□ 1.08
ATG3-205ENST00000488910 WBP1LQ9NX94 342 aa21.78■■□□□ 1.08
ATG3-205ENST00000488910 CEP126Q9P2H0 1117 aa21.78■■□□□ 1.08
ATG3-205ENST00000488910 IL15P40933 162 aaPredicted RBP21.77■■□□□ 1.08
ATG3-205ENST00000488910 MFSD14BQ5SR56 506 aa21.77■■□□□ 1.08
ATG3-205ENST00000488910 LPIN2Q92539 896 aa21.77■■□□□ 1.08
ATG3-205ENST00000488910 AIDAQ96BJ3 306 aa21.77■■□□□ 1.08
ATG3-205ENST00000488910 JAG2Q9Y219 1238 aa21.77■■□□□ 1.08
ATG3-205ENST00000488910 F8W031 263 aaPredicted RBP21.76■■□□□ 1.07
ATG3-205ENST00000488910 FRAT2O75474 233 aaPredicted RBP21.76■■□□□ 1.07
ATG3-205ENST00000488910 GNAI2P04899 355 aa21.76■■□□□ 1.07
ATG3-205ENST00000488910 SLC5A1P13866 664 aa21.76■■□□□ 1.07
ATG3-205ENST00000488910 FKBP1BP68106 108 aa21.76■■□□□ 1.07
ATG3-205ENST00000488910 GRM1Q13255 1194 aa21.76■■□□□ 1.07
ATG3-205ENST00000488910 MTX1Q13505 466 aa21.76■■□□□ 1.07
ATG3-205ENST00000488910 APOBEC3FQ8IUX4 373 aaKnown RBP21.76■■□□□ 1.07
ATG3-205ENST00000488910 SIL1Q9H173 461 aa21.76■■□□□ 1.07
ATG3-205ENST00000488910 TNNQ9UQP3 1299 aa21.76■■□□□ 1.07
ATG3-205ENST00000488910 BCAMP50895 628 aa21.75■■□□□ 1.07
ATG3-205ENST00000488910 CFAP100Q494V2 611 aa21.75■■□□□ 1.07
ATG3-205ENST00000488910 TBC1D22AQ8WUA7 517 aa21.75■■□□□ 1.07
ATG3-205ENST00000488910 SRGAP3O43295 1099 aa21.74■■□□□ 1.07
ATG3-205ENST00000488910 MYO1BO43795 1136 aa21.74■■□□□ 1.07
ATG3-205ENST00000488910 RGMBQ6NW40 437 aa21.74■■□□□ 1.07
ATG3-205ENST00000488910 TMEM57Q8N5G2 664 aa21.74■■□□□ 1.07
ATG3-205ENST00000488910 SPDYE2BA6NHP3 402 aa21.73■■□□□ 1.07
ATG3-205ENST00000488910 FOXN1O15353 648 aa21.73■■□□□ 1.07
ATG3-205ENST00000488910 SPDYE6P0CI01 402 aa21.73■■□□□ 1.07
ATG3-205ENST00000488910 CCDC102AQ96A19 550 aa21.73■■□□□ 1.07
ATG3-205ENST00000488910 SERPINA10Q9UK55 444 aa21.73■■□□□ 1.07
ATG3-205ENST00000488910 TTF2Q9UNY4 1162 aaKnown RBP21.73■■□□□ 1.07
ATG3-205ENST00000488910 SCAF8Q9UPN6 1271 aaKnown RBP21.73■■□□□ 1.07
ATG3-205ENST00000488910 PA2G4Q9UQ80 394 aaKnown RBP21.73■■□□□ 1.07
ATG3-205ENST00000488910 AOC2O75106 756 aa21.72■■□□□ 1.07
ATG3-205ENST00000488910 NF2P35240 595 aa21.72■■□□□ 1.07
ATG3-205ENST00000488910 CTCFP49711 727 aaPredicted RBP21.72■■□□□ 1.07
ATG3-205ENST00000488910 NOGQ13253 232 aa21.72■■□□□ 1.07
ATG3-205ENST00000488910 ATP2B3Q16720 1220 aa21.72■■□□□ 1.07
ATG3-205ENST00000488910 FTSJ3Q8IY81 847 aaKnown RBP21.72■■□□□ 1.07
ATG3-205ENST00000488910 DZIP1LQ8IYY4 767 aaKnown RBP21.72■■□□□ 1.07
ATG3-205ENST00000488910 PRMT6Q96LA8 375 aaPredicted RBP21.72■■□□□ 1.07
ATG3-205ENST00000488910 IQSEC3Q9UPP2 1182 aaPredicted RBP21.72■■□□□ 1.07
ATG3-205ENST00000488910 THSD7BQ9C0I4 1608 aa21.71■■□□□ 1.07
ATG3-205ENST00000488910 RBM5P52756 815 aaKnown RBP eCLIP21.71■■□□□ 1.07
ATG3-205ENST00000488910 CHAF1AQ13111 956 aaPredicted RBP21.71■■□□□ 1.07
ATG3-205ENST00000488910 COL13A1Q5TAT6 717 aaPredicted RBP21.71■■□□□ 1.07
ATG3-205ENST00000488910 BEGAINQ9BUH8 593 aa21.71■■□□□ 1.07
ATG3-205ENST00000488910 SUGT1Q9Y2Z0 365 aa21.71■■□□□ 1.07
ATG3-205ENST00000488910 ZNF157P51786 506 aaPredicted RBP21.7■■□□□ 1.06
ATG3-205ENST00000488910 HDLBPQ00341 1268 aaKnown RBP21.7■■□□□ 1.06
ATG3-205ENST00000488910 PRAMEF18Q5VWM3 479 aa21.7■■□□□ 1.06
ATG3-205ENST00000488910 MRIQ9BWK5 157 aa21.7■■□□□ 1.06
ATG3-205ENST00000488910 GNL3LQ9NVN8 582 aaKnown RBP21.7■■□□□ 1.06
ATG3-205ENST00000488910 PPP2R3BQ9Y5P8 575 aa21.7■■□□□ 1.06
ATG3-205ENST00000488910 DEFB129Q9H1M3 183 aa21.69■■□□□ 1.06
ATG3-205ENST00000488910 PRDM10Q9NQV6 1147 aa21.69■■□□□ 1.06
ATG3-205ENST00000488910 PCDHAC2Q9Y5I4 1007 aa21.69■■□□□ 1.06
ATG3-205ENST00000488910 COL1A1P02452 1464 aaPredicted RBP21.69■■□□□ 1.06
ATG3-205ENST00000488910 FAM155AB1AL88 458 aaPredicted RBP21.68■■□□□ 1.06
ATG3-205ENST00000488910 WDR66Q8TBY9 1149 aa21.68■■□□□ 1.06
ATG3-205ENST00000488910 AKAP2Q9Y2D5 859 aa21.68■■□□□ 1.06
ATG3-205ENST00000488910 PAPPA2Q9BXP8 1791 aa21.68■■□□□ 1.06
ATG3-205ENST00000488910 ECM29Q5VYK3 1845 aa21.68■■□□□ 1.06
ATG3-205ENST00000488910 ZBTB22O15209 634 aa21.67■■□□□ 1.06
ATG3-205ENST00000488910 CRKP46108 304 aa21.67■■□□□ 1.06
ATG3-205ENST00000488910 IFFO2Q5TF58 517 aa21.67■■□□□ 1.06
ATG3-205ENST00000488910 ARAP2Q8WZ64 1704 aa21.66■■□□□ 1.06
ATG3-205ENST00000488910 MAST3O60307 1309 aa21.66■■□□□ 1.06
ATG3-205ENST00000488910 CLRN2A0PK11 232 aa21.66■■□□□ 1.06
ATG3-205ENST00000488910 ZBTB7BO15156 539 aaPredicted RBP21.66■■□□□ 1.06
ATG3-205ENST00000488910 CA12O43570 354 aa21.66■■□□□ 1.06
ATG3-205ENST00000488910 MS4A1P11836 297 aa21.66■■□□□ 1.06
ATG3-205ENST00000488910 ITPRIPQ8IWB1 547 aa21.66■■□□□ 1.06
ATG3-205ENST00000488910 PNMA6EA0A0J9YXQ4 647 aa21.65■■□□□ 1.06
ATG3-205ENST00000488910 SEMA3EO15041 775 aa21.65■■□□□ 1.06
ATG3-205ENST00000488910 SLC10A3P09131 477 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms