RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 FKBP1AP62942 108 aaKnown RBP14.32□□□□□ -0.12
SPEN-205ENST00000487496 ATF7IPQ6VMQ6 1270 aa14.32□□□□□ -0.12
SPEN-205ENST00000487496 CDCA5Q96FF9 252 aa14.32□□□□□ -0.12
SPEN-205ENST00000487496 GBA2Q9HCG7 927 aaPredicted RBP14.32□□□□□ -0.12
SPEN-205ENST00000487496 WBP1LQ9NX94 342 aa14.32□□□□□ -0.12
SPEN-205ENST00000487496 SCAF8Q9UPN6 1271 aaKnown RBP14.32□□□□□ -0.12
SPEN-205ENST00000487496 TNNQ9UQP3 1299 aa14.32□□□□□ -0.12
SPEN-205ENST00000487496 ZBED9Q6R2W3 1325 aa14.32□□□□□ -0.12
SPEN-205ENST00000487496 FAM205AQ6ZU69 1335 aa14.32□□□□□ -0.12
SPEN-205ENST00000487496 PCNTO95613 3336 aa14.31□□□□□ -0.12
SPEN-205ENST00000487496 HUNKP57058 714 aa14.31□□□□□ -0.12
SPEN-205ENST00000487496 COL13A1Q5TAT6 717 aaPredicted RBP14.31□□□□□ -0.12
SPEN-205ENST00000487496 FBXO33Q7Z6M2 555 aa14.31□□□□□ -0.12
SPEN-205ENST00000487496 C2orf69Q8N8R5 385 aa14.31□□□□□ -0.12
SPEN-205ENST00000487496 ZBED3Q96IU2 234 aaPredicted RBP14.31□□□□□ -0.12
SPEN-205ENST00000487496 F8W031 263 aaPredicted RBP14.3□□□□□ -0.12
SPEN-205ENST00000487496 FOXN1O15353 648 aa14.3□□□□□ -0.12
SPEN-205ENST00000487496 GNAI3P08754 354 aa14.3□□□□□ -0.12
SPEN-205ENST00000487496 MAP2K1Q02750 393 aaPredicted RBP14.3□□□□□ -0.12
SPEN-205ENST00000487496 ATG9AQ7Z3C6 839 aa14.3□□□□□ -0.12
SPEN-205ENST00000487496 VPS37DQ86XT2 251 aa14.3□□□□□ -0.12
SPEN-205ENST00000487496 MTMR14Q8NCE2 650 aa14.3□□□□□ -0.12
SPEN-205ENST00000487496 CLUAP1Q96AJ1 413 aa14.3□□□□□ -0.12
SPEN-205ENST00000487496 AOC2O75106 756 aa14.29□□□□□ -0.12
SPEN-205ENST00000487496 CIAO1O76071 339 aa14.29□□□□□ -0.12
SPEN-205ENST00000487496 FGFR2P21802 821 aa14.29□□□□□ -0.12
SPEN-205ENST00000487496 MAP2K2P36507 400 aa14.29□□□□□ -0.12
SPEN-205ENST00000487496 PUM3Q15397 648 aaKnown RBP14.29□□□□□ -0.12
SPEN-205ENST00000487496 DLGAP5Q15398 846 aa14.29□□□□□ -0.12
SPEN-205ENST00000487496 CAVIN4Q5BKX8 364 aa14.29□□□□□ -0.12
SPEN-205ENST00000487496 MFSD14BQ5SR56 506 aa14.29□□□□□ -0.12
SPEN-205ENST00000487496 ZKSCAN2Q63HK3 967 aa14.29□□□□□ -0.12
SPEN-205ENST00000487496 AIDAQ96BJ3 306 aa14.29□□□□□ -0.12
SPEN-205ENST00000487496 SIL1Q9H173 461 aa14.29□□□□□ -0.12
SPEN-205ENST00000487496 FBXO3Q9UK99 471 aa14.29□□□□□ -0.12
SPEN-205ENST00000487496 IQSEC3Q9UPP2 1182 aaPredicted RBP14.29□□□□□ -0.12
SPEN-205ENST00000487496 IFIT1P09914 478 aaKnown RBP14.28□□□□□ -0.12
SPEN-205ENST00000487496 KCNA4P22459 653 aa14.28□□□□□ -0.12
SPEN-205ENST00000487496 BCAMP50895 628 aa14.28□□□□□ -0.12
SPEN-205ENST00000487496 CFAP100Q494V2 611 aa14.28□□□□□ -0.12
SPEN-205ENST00000487496 PRAMEF18Q5VWM3 479 aa14.28□□□□□ -0.12
SPEN-205ENST00000487496 COPRSQ9NQ92 184 aa14.28□□□□□ -0.12
SPEN-205ENST00000487496 PA2G4Q9UQ80 394 aaKnown RBP14.28□□□□□ -0.12
SPEN-205ENST00000487496 PCDHAC2Q9Y5I4 1007 aa14.28□□□□□ -0.12
SPEN-205ENST00000487496 IL15P40933 162 aaPredicted RBP14.27□□□□□ -0.13
SPEN-205ENST00000487496 FKBP1BP68106 108 aa14.27□□□□□ -0.13
SPEN-205ENST00000487496 RGMBQ6NW40 437 aa14.27□□□□□ -0.13
SPEN-205ENST00000487496 APOBEC3FQ8IUX4 373 aaKnown RBP14.27□□□□□ -0.13
SPEN-205ENST00000487496 TMEM57Q8N5G2 664 aa14.27□□□□□ -0.13
SPEN-205ENST00000487496 LPIN2Q92539 896 aa14.27□□□□□ -0.13
SPEN-205ENST00000487496 PRMT6Q96LA8 375 aaPredicted RBP14.27□□□□□ -0.13
SPEN-205ENST00000487496 CEP126Q9P2H0 1117 aa14.27□□□□□ -0.13
SPEN-205ENST00000487496 SPDYE2BA6NHP3 402 aa14.26□□□□□ -0.13
SPEN-205ENST00000487496 SRGAP3O43295 1099 aa14.26□□□□□ -0.13
SPEN-205ENST00000487496 FRAT2O75474 233 aaPredicted RBP14.26□□□□□ -0.13
SPEN-205ENST00000487496 SPDYE6P0CI01 402 aa14.26□□□□□ -0.13
SPEN-205ENST00000487496 SLC5A1P13866 664 aa14.26□□□□□ -0.13
SPEN-205ENST00000487496 CTCFP49711 727 aaPredicted RBP14.26□□□□□ -0.13
SPEN-205ENST00000487496 CHAF1AQ13111 956 aaPredicted RBP14.26□□□□□ -0.13
SPEN-205ENST00000487496 NOGQ13253 232 aa14.26□□□□□ -0.13
SPEN-205ENST00000487496 MTX1Q13505 466 aa14.26□□□□□ -0.13
SPEN-205ENST00000487496 IFFO2Q5TF58 517 aa14.26□□□□□ -0.13
SPEN-205ENST00000487496 TTF2Q9UNY4 1162 aaKnown RBP14.26□□□□□ -0.13
SPEN-205ENST00000487496 THSD7BQ9C0I4 1608 aa14.26□□□□□ -0.13
SPEN-205ENST00000487496 FAM155AB1AL88 458 aaPredicted RBP14.25□□□□□ -0.13
SPEN-205ENST00000487496 MYO1BO43795 1136 aa14.25□□□□□ -0.13
SPEN-205ENST00000487496 GNAI2P04899 355 aa14.25□□□□□ -0.13
SPEN-205ENST00000487496 ZNF157P51786 506 aaPredicted RBP14.25□□□□□ -0.13
SPEN-205ENST00000487496 RBM5P52756 815 aaKnown RBP eCLIP14.25□□□□□ -0.13
SPEN-205ENST00000487496 GRIK5Q16478 980 aa14.25□□□□□ -0.13
SPEN-205ENST00000487496 ATP2B3Q16720 1220 aa14.25□□□□□ -0.13
SPEN-205ENST00000487496 MOB2Q70IA6 237 aa14.25□□□□□ -0.13
SPEN-205ENST00000487496 TBC1D22AQ8WUA7 517 aa14.25□□□□□ -0.13
SPEN-205ENST00000487496 CCDC102AQ96A19 550 aa14.25□□□□□ -0.13
SPEN-205ENST00000487496 ZIC5Q96T25 663 aa14.25□□□□□ -0.13
SPEN-205ENST00000487496 SERPINA10Q9UK55 444 aa14.25□□□□□ -0.13
SPEN-205ENST00000487496 AOX1Q06278 1338 aa14.24□□□□□ -0.13
SPEN-205ENST00000487496 CLRN2A0PK11 232 aa14.24□□□□□ -0.13
SPEN-205ENST00000487496 NF2P35240 595 aa14.24□□□□□ -0.13
SPEN-205ENST00000487496 BEGAINQ9BUH8 593 aa14.24□□□□□ -0.13
SPEN-205ENST00000487496 DEFB129Q9H1M3 183 aa14.24□□□□□ -0.13
SPEN-205ENST00000487496 PRDM10Q9NQV6 1147 aa14.24□□□□□ -0.13
SPEN-205ENST00000487496 UBE2Q2LH0YL09 131 aa14.23□□□□□ -0.13
SPEN-205ENST00000487496 HSPA8P11142 646 aaKnown RBP14.23□□□□□ -0.13
SPEN-205ENST00000487496 CRKP46108 304 aa14.23□□□□□ -0.13
SPEN-205ENST00000487496 LBX1P52954 281 aa14.23□□□□□ -0.13
SPEN-205ENST00000487496 SLC10A3P09131 477 aa14.22□□□□□ -0.13
SPEN-205ENST00000487496 HDLBPQ00341 1268 aaKnown RBP14.22□□□□□ -0.13
SPEN-205ENST00000487496 TTLL12Q14166 644 aaPredicted RBP14.22□□□□□ -0.13
SPEN-205ENST00000487496 FTSJ3Q8IY81 847 aaKnown RBP14.22□□□□□ -0.13
SPEN-205ENST00000487496 DZIP1LQ8IYY4 767 aaKnown RBP14.22□□□□□ -0.13
SPEN-205ENST00000487496 VEZTQ9HBM0 779 aa14.22□□□□□ -0.13
SPEN-205ENST00000487496 PPP2R3BQ9Y5P8 575 aa14.22□□□□□ -0.13
SPEN-205ENST00000487496 PAPPA2Q9BXP8 1791 aa14.22□□□□□ -0.13
SPEN-205ENST00000487496 COL1A1P02452 1464 aaPredicted RBP14.21□□□□□ -0.13
SPEN-205ENST00000487496 PNMA6EA0A0J9YXQ4 647 aa14.21□□□□□ -0.13
SPEN-205ENST00000487496 RLBP1P12271 317 aa14.21□□□□□ -0.13
SPEN-205ENST00000487496 KIF23Q02241 960 aaPredicted RBP14.21□□□□□ -0.13
SPEN-205ENST00000487496 SPDYE2Q495Y8 402 aa14.21□□□□□ -0.13
SPEN-205ENST00000487496 RASAL3Q86YV0 1011 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms