RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 EYA2O00167 538 aa21.38■■□□□ 1.01
SSBP1-207ENST00000468267 TRIM27P14373 513 aa21.38■■□□□ 1.01
SSBP1-207ENST00000468267 HOXD11P31277 338 aaPredicted RBP21.38■■□□□ 1.01
SSBP1-207ENST00000468267 CYP4F22Q6NT55 531 aa21.38■■□□□ 1.01
SSBP1-207ENST00000468267 PAXIP1Q6ZW49 1069 aaPredicted RBP21.38■■□□□ 1.01
SSBP1-207ENST00000468267 FRAT1Q92837 279 aaPredicted RBP21.38■■□□□ 1.01
SSBP1-207ENST00000468267 FAM205AQ6ZU69 1335 aa21.37■■□□□ 1.01
SSBP1-207ENST00000468267 WNT10BO00744 389 aa21.37■■□□□ 1.01
SSBP1-207ENST00000468267 FBXO33Q7Z6M2 555 aa21.37■■□□□ 1.01
SSBP1-207ENST00000468267 GNAI3P08754 354 aa21.36■■□□□ 1.01
SSBP1-207ENST00000468267 CDCA5Q96FF9 252 aa21.36■■□□□ 1.01
SSBP1-207ENST00000468267 ZBED3Q96IU2 234 aaPredicted RBP21.36■■□□□ 1.01
SSBP1-207ENST00000468267 TNNQ9UQP3 1299 aa21.36■■□□□ 1.01
SSBP1-207ENST00000468267 ATG9AQ7Z3C6 839 aa21.35■■□□□ 1.01
SSBP1-207ENST00000468267 C2orf69Q8N8R5 385 aa21.35■■□□□ 1.01
SSBP1-207ENST00000468267 GBA2Q9HCG7 927 aaPredicted RBP21.35■■□□□ 1.01
SSBP1-207ENST00000468267 WBP1LQ9NX94 342 aa21.35■■□□□ 1.01
SSBP1-207ENST00000468267 FBXO3Q9UK99 471 aa21.35■■□□□ 1.01
SSBP1-207ENST00000468267 JAG2Q9Y219 1238 aa21.35■■□□□ 1.01
SSBP1-207ENST00000468267 FGFR2P21802 821 aa21.34■■□□□ 1.01
SSBP1-207ENST00000468267 HUNKP57058 714 aa21.34■■□□□ 1.01
SSBP1-207ENST00000468267 GRM1Q13255 1194 aa21.34■■□□□ 1.01
SSBP1-207ENST00000468267 PUM3Q15397 648 aaKnown RBP21.34■■□□□ 1.01
SSBP1-207ENST00000468267 VPS37DQ86XT2 251 aa21.34■■□□□ 1.01
SSBP1-207ENST00000468267 MTMR14Q8NCE2 650 aa21.34■■□□□ 1.01
SSBP1-207ENST00000468267 THSD7BQ9C0I4 1608 aa21.33■■□□□ 1.01
SSBP1-207ENST00000468267 CIAO1O76071 339 aa21.33■■□□□ 1.01
SSBP1-207ENST00000468267 MAP2K1Q02750 393 aaPredicted RBP21.33■■□□□ 1.01
SSBP1-207ENST00000468267 DLGAP5Q15398 846 aa21.33■■□□□ 1.01
SSBP1-207ENST00000468267 CAVIN4Q5BKX8 364 aa21.33■■□□□ 1.01
SSBP1-207ENST00000468267 ZKSCAN2Q63HK3 967 aa21.33■■□□□ 1.01
SSBP1-207ENST00000468267 CLUAP1Q96AJ1 413 aa21.33■■□□□ 1.01
SSBP1-207ENST00000468267 SCAF8Q9UPN6 1271 aaKnown RBP21.33■■□□□ 1.01
SSBP1-207ENST00000468267 F8W031 263 aaPredicted RBP21.32■■□□□ 1
SSBP1-207ENST00000468267 FOXN1O15353 648 aa21.32■■□□□ 1
SSBP1-207ENST00000468267 MAP2K2P36507 400 aa21.32■■□□□ 1
SSBP1-207ENST00000468267 AIDAQ96BJ3 306 aa21.32■■□□□ 1
SSBP1-207ENST00000468267 SIL1Q9H173 461 aa21.32■■□□□ 1
SSBP1-207ENST00000468267 AOC2O75106 756 aa21.31■■□□□ 1
SSBP1-207ENST00000468267 IFIT1P09914 478 aaKnown RBP21.31■■□□□ 1
SSBP1-207ENST00000468267 BCAMP50895 628 aa21.31■■□□□ 1
SSBP1-207ENST00000468267 MFSD14BQ5SR56 506 aa21.31■■□□□ 1
SSBP1-207ENST00000468267 COL13A1Q5TAT6 717 aaPredicted RBP21.31■■□□□ 1
SSBP1-207ENST00000468267 COPRSQ9NQ92 184 aa21.31■■□□□ 1
SSBP1-207ENST00000468267 ECM29Q5VYK3 1845 aa21.31■■□□□ 1
SSBP1-207ENST00000468267 CFAP100Q494V2 611 aa21.3■■□□□ 1
SSBP1-207ENST00000468267 APOBEC3FQ8IUX4 373 aaKnown RBP21.3■■□□□ 1
SSBP1-207ENST00000468267 LPIN2Q92539 896 aa21.3■■□□□ 1
SSBP1-207ENST00000468267 CEP126Q9P2H0 1117 aa21.3■■□□□ 1
SSBP1-207ENST00000468267 IQSEC3Q9UPP2 1182 aaPredicted RBP21.3■■□□□ 1
SSBP1-207ENST00000468267 PA2G4Q9UQ80 394 aaKnown RBP21.3■■□□□ 1
SSBP1-207ENST00000468267 SLC5A1P13866 664 aa21.29■■□□□ 1
SSBP1-207ENST00000468267 IL15P40933 162 aaPredicted RBP21.29■■□□□ 1
SSBP1-207ENST00000468267 MTX1Q13505 466 aa21.29■■□□□ 1
SSBP1-207ENST00000468267 PRAMEF18Q5VWM3 479 aa21.29■■□□□ 1
SSBP1-207ENST00000468267 RGMBQ6NW40 437 aa21.29■■□□□ 1
SSBP1-207ENST00000468267 TMEM57Q8N5G2 664 aa21.29■■□□□ 1
SSBP1-207ENST00000468267 PCDHAC2Q9Y5I4 1007 aa21.29■■□□□ 1
SSBP1-207ENST00000468267 ARAP2Q8WZ64 1704 aa21.29■■□□□ 1
SSBP1-207ENST00000468267 SPDYE2BA6NHP3 402 aa21.28■■□□□ 1
SSBP1-207ENST00000468267 FRAT2O75474 233 aaPredicted RBP21.28■■□□□ 1
SSBP1-207ENST00000468267 GNAI2P04899 355 aa21.28■■□□□ 1
SSBP1-207ENST00000468267 SPDYE6P0CI01 402 aa21.28■■□□□ 1
SSBP1-207ENST00000468267 CTCFP49711 727 aaPredicted RBP21.28■■□□□ 1
SSBP1-207ENST00000468267 FKBP1BP68106 108 aa21.28■■□□□ 1
SSBP1-207ENST00000468267 PRMT6Q96LA8 375 aaPredicted RBP21.28■■□□□ 1
SSBP1-207ENST00000468267 TTF2Q9UNY4 1162 aaKnown RBP21.28■■□□□ 1
SSBP1-207ENST00000468267 SRGAP3O43295 1099 aa21.27■■□□□ 1
SSBP1-207ENST00000468267 CHAF1AQ13111 956 aaPredicted RBP21.27■■□□□ 1
SSBP1-207ENST00000468267 TBC1D22AQ8WUA7 517 aa21.27■■□□□ 1
SSBP1-207ENST00000468267 PAPPA2Q9BXP8 1791 aa21.27■■□□□ 1
SSBP1-207ENST00000468267 MYH13Q9UKX3 1938 aa21.26■□□□□ 0.99
SSBP1-207ENST00000468267 MYO1BO43795 1136 aa21.26■□□□□ 0.99
SSBP1-207ENST00000468267 ZNF157P51786 506 aaPredicted RBP21.26■□□□□ 0.99
SSBP1-207ENST00000468267 RBM5P52756 815 aaKnown RBP eCLIP21.26■□□□□ 0.99
SSBP1-207ENST00000468267 NOGQ13253 232 aa21.26■□□□□ 0.99
SSBP1-207ENST00000468267 ATP2B3Q16720 1220 aa21.26■□□□□ 0.99
SSBP1-207ENST00000468267 CCDC102AQ96A19 550 aa21.26■□□□□ 0.99
SSBP1-207ENST00000468267 SERPINA10Q9UK55 444 aa21.26■□□□□ 0.99
SSBP1-207ENST00000468267 FAM155AB1AL88 458 aaPredicted RBP21.25■□□□□ 0.99
SSBP1-207ENST00000468267 CACNB1Q02641 598 aaPredicted RBP21.25■□□□□ 0.99
SSBP1-207ENST00000468267 GRIK5Q16478 980 aa21.25■□□□□ 0.99
SSBP1-207ENST00000468267 IFFO2Q5TF58 517 aa21.25■□□□□ 0.99
SSBP1-207ENST00000468267 NF2P35240 595 aa21.24■□□□□ 0.99
SSBP1-207ENST00000468267 FTSJ3Q8IY81 847 aaKnown RBP21.24■□□□□ 0.99
SSBP1-207ENST00000468267 DZIP1LQ8IYY4 767 aaKnown RBP21.24■□□□□ 0.99
SSBP1-207ENST00000468267 ZIC5Q96T25 663 aa21.24■□□□□ 0.99
SSBP1-207ENST00000468267 BEGAINQ9BUH8 593 aa21.24■□□□□ 0.99
SSBP1-207ENST00000468267 DEFB129Q9H1M3 183 aa21.24■□□□□ 0.99
SSBP1-207ENST00000468267 PRDM10Q9NQV6 1147 aa21.24■□□□□ 0.99
SSBP1-207ENST00000468267 AOX1Q06278 1338 aa21.24■□□□□ 0.99
SSBP1-207ENST00000468267 CLRN2A0PK11 232 aa21.23■□□□□ 0.99
SSBP1-207ENST00000468267 MOB2Q70IA6 237 aa21.23■□□□□ 0.99
SSBP1-207ENST00000468267 CNKSR2Q8WXI2 1034 aa21.23■□□□□ 0.99
SSBP1-207ENST00000468267 COL1A1P02452 1464 aaPredicted RBP21.23■□□□□ 0.99
SSBP1-207ENST00000468267 UBE2Q2LH0YL09 131 aa21.22■□□□□ 0.99
SSBP1-207ENST00000468267 SLC10A3P09131 477 aa21.22■□□□□ 0.99
SSBP1-207ENST00000468267 HSPA8P11142 646 aaKnown RBP21.22■□□□□ 0.99
SSBP1-207ENST00000468267 RLBP1P12271 317 aa21.22■□□□□ 0.99
SSBP1-207ENST00000468267 CRKP46108 304 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms