RNA–Protein interactions for RNA: ENST00000366738.5

MRPL55-211, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 1 (best) BASIC

Gene MRPL55, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-211ENST00000366738 RRP1P56182 461 aaKnown RBP10.34□□□□□ -0.75
MRPL55-211ENST00000366738 CAP1Q01518 475 aa10.34□□□□□ -0.75
MRPL55-211ENST00000366738 CD99L2Q8TCZ2 262 aa10.34□□□□□ -0.75
MRPL55-211ENST00000366738 FBXW7Q969H0 707 aa10.34□□□□□ -0.75
MRPL55-211ENST00000366738 ANGEL1Q9UNK9 670 aaKnown RBP10.34□□□□□ -0.75
MRPL55-211ENST00000366738 SUPT16HQ9Y5B9 1047 aaKnown RBP10.34□□□□□ -0.75
MRPL55-211ENST00000366738 F6X3S4 739 aa10.33□□□□□ -0.76
MRPL55-211ENST00000366738 H7C1W4 665 aa10.33□□□□□ -0.76
MRPL55-211ENST00000366738 ALDH1A1P00352 501 aa10.33□□□□□ -0.76
MRPL55-211ENST00000366738 TRIM27P14373 513 aa10.33□□□□□ -0.76
MRPL55-211ENST00000366738 CASP7P55210 303 aa10.33□□□□□ -0.76
MRPL55-211ENST00000366738 FKBP5Q13451 457 aaPredicted RBP10.33□□□□□ -0.76
MRPL55-211ENST00000366738 LDLRAD1Q5T700 205 aa10.33□□□□□ -0.76
MRPL55-211ENST00000366738 C20orf194Q5TEA3 1177 aa10.33□□□□□ -0.76
MRPL55-211ENST00000366738 ARMC9Q7Z3E5 817 aa10.33□□□□□ -0.76
MRPL55-211ENST00000366738 TXNRD3Q86VQ6 643 aa10.33□□□□□ -0.76
MRPL55-211ENST00000366738 IFNL1Q8IU54 200 aa10.33□□□□□ -0.76
MRPL55-211ENST00000366738 ANKRD18AQ8IVF6 992 aa10.33□□□□□ -0.76
MRPL55-211ENST00000366738 ARMC5Q96C12 935 aa10.33□□□□□ -0.76
MRPL55-211ENST00000366738 MINPP1Q9UNW1 487 aa10.33□□□□□ -0.76
MRPL55-211ENST00000366738 PTPN22Q9Y2R2 807 aa10.33□□□□□ -0.76
MRPL55-211ENST00000366738 SSC5DA1L4H1 1573 aa10.33□□□□□ -0.76
MRPL55-211ENST00000366738 MYH3P11055 1940 aa10.33□□□□□ -0.76
MRPL55-211ENST00000366738 XDHP47989 1333 aa10.33□□□□□ -0.76
MRPL55-211ENST00000366738 RLBP1P12271 317 aa10.32□□□□□ -0.76
MRPL55-211ENST00000366738 KLRK1P26718 216 aa10.32□□□□□ -0.76
MRPL55-211ENST00000366738 DACT2Q5SW24 774 aa10.32□□□□□ -0.76
MRPL55-211ENST00000366738 UBE3BQ7Z3V4 1068 aa10.32□□□□□ -0.76
MRPL55-211ENST00000366738 PODNQ7Z5L7 613 aa10.32□□□□□ -0.76
MRPL55-211ENST00000366738 WNK4Q96J92 1243 aa10.32□□□□□ -0.76
MRPL55-211ENST00000366738 CLMNQ96JQ2 1002 aa10.32□□□□□ -0.76
MRPL55-211ENST00000366738 PTPRCP08575 1304 aa10.32□□□□□ -0.76
MRPL55-211ENST00000366738 LAMB1P07942 1786 aa10.31□□□□□ -0.76
MRPL55-211ENST00000366738 MANSC4A6NHS7 340 aaPredicted RBP10.31□□□□□ -0.76
MRPL55-211ENST00000366738 HSP90B1P14625 803 aaKnown RBP10.31□□□□□ -0.76
MRPL55-211ENST00000366738 ATP2B4P23634 1241 aa10.31□□□□□ -0.76
MRPL55-211ENST00000366738 CRHR2Q13324 411 aa10.31□□□□□ -0.76
MRPL55-211ENST00000366738 GCKRQ14397 625 aa10.31□□□□□ -0.76
MRPL55-211ENST00000366738 ZKSCAN2Q63HK3 967 aa10.31□□□□□ -0.76
MRPL55-211ENST00000366738 ATF7IPQ6VMQ6 1270 aa10.31□□□□□ -0.76
MRPL55-211ENST00000366738 OGFOD1Q8N543 542 aa10.31□□□□□ -0.76
MRPL55-211ENST00000366738 CLUAP1Q96AJ1 413 aa10.31□□□□□ -0.76
MRPL55-211ENST00000366738 ERO1AQ96HE7 468 aa10.31□□□□□ -0.76
MRPL55-211ENST00000366738 CHMP4AQ9BY43 222 aa10.31□□□□□ -0.76
MRPL55-211ENST00000366738 BSDC1Q9NW68 430 aaPredicted RBP10.31□□□□□ -0.76
MRPL55-211ENST00000366738 MED23Q9ULK4 1368 aa10.3□□□□□ -0.76
MRPL55-211ENST00000366738 H0YGN5 161 aa10.3□□□□□ -0.76
MRPL55-211ENST00000366738 SNAP23O00161 211 aa10.3□□□□□ -0.76
MRPL55-211ENST00000366738 MYCP01106 439 aaPredicted RBP10.3□□□□□ -0.76
MRPL55-211ENST00000366738 CSF1RP07333 972 aa10.3□□□□□ -0.76
MRPL55-211ENST00000366738 CCT4P50991 539 aaKnown RBP10.3□□□□□ -0.76
MRPL55-211ENST00000366738 IRX6P78412 446 aaPredicted RBP10.3□□□□□ -0.76
MRPL55-211ENST00000366738 APOBEC3FQ8IUX4 373 aaKnown RBP10.3□□□□□ -0.76
MRPL55-211ENST00000366738 KIAA0825Q8IV33 1275 aa10.3□□□□□ -0.76
MRPL55-211ENST00000366738 PANK1Q8TE04 598 aa10.3□□□□□ -0.76
MRPL55-211ENST00000366738 SLC10A4Q96EP9 437 aa10.3□□□□□ -0.76
MRPL55-211ENST00000366738 ZNF333Q96JL9 665 aa10.3□□□□□ -0.76
MRPL55-211ENST00000366738 CDC5LQ99459 802 aaKnown RBP10.3□□□□□ -0.76
MRPL55-211ENST00000366738 EFCC1Q9HA90 598 aa10.3□□□□□ -0.76
MRPL55-211ENST00000366738 IRS2Q9Y4H2 1338 aa10.3□□□□□ -0.76
MRPL55-211ENST00000366738 ZBTB48P10074 688 aaPredicted RBP10.29□□□□□ -0.76
MRPL55-211ENST00000366738 ITGA6P23229 1130 aa10.29□□□□□ -0.76
MRPL55-211ENST00000366738 GJA5P36382 358 aa10.29□□□□□ -0.76
MRPL55-211ENST00000366738 NEXNQ0ZGT2 675 aa10.29□□□□□ -0.76
MRPL55-211ENST00000366738 CHRDL2Q6WN34 429 aa10.29□□□□□ -0.76
MRPL55-211ENST00000366738 TMEM57Q8N5G2 664 aa10.29□□□□□ -0.76
MRPL55-211ENST00000366738 DNAAF4Q8WXU2 420 aa10.29□□□□□ -0.76
MRPL55-211ENST00000366738 ARHGAP45Q92619 1136 aa10.29□□□□□ -0.76
MRPL55-211ENST00000366738 OTUD5Q96G74 571 aa10.29□□□□□ -0.76
MRPL55-211ENST00000366738 ZBED3Q96IU2 234 aaPredicted RBP10.29□□□□□ -0.76
MRPL55-211ENST00000366738 TMEM106CQ9BVX2 250 aa10.29□□□□□ -0.76
MRPL55-211ENST00000366738 PLA2G12BQ9BX93 195 aa10.29□□□□□ -0.76
MRPL55-211ENST00000366738 API5Q9BZZ5 524 aaKnown RBP10.29□□□□□ -0.76
MRPL55-211ENST00000366738 COL6A3P12111 3177 aa10.29□□□□□ -0.76
MRPL55-211ENST00000366738 MYO3BQ8WXR4 1341 aa10.29□□□□□ -0.76
MRPL55-211ENST00000366738 A0A1B0GUL6 1792 aa10.29□□□□□ -0.76
MRPL55-211ENST00000366738 LAMA3Q16787 3333 aa10.28□□□□□ -0.76
MRPL55-211ENST00000366738 INHBEP58166 350 aa10.28□□□□□ -0.76
MRPL55-211ENST00000366738 FOXO4P98177 505 aa10.28□□□□□ -0.76
MRPL55-211ENST00000366738 EPHA10Q5JZY3 1008 aa10.28□□□□□ -0.76
MRPL55-211ENST00000366738 STRIP1Q5VSL9 837 aa10.28□□□□□ -0.76
MRPL55-211ENST00000366738 SLC4A10Q6U841 1118 aa10.28□□□□□ -0.76
MRPL55-211ENST00000366738 DZIP1LQ8IYY4 767 aaKnown RBP10.28□□□□□ -0.76
MRPL55-211ENST00000366738 LINS1Q8NG48 757 aa10.28□□□□□ -0.76
MRPL55-211ENST00000366738 PTPN18Q99952 460 aa10.28□□□□□ -0.76
MRPL55-211ENST00000366738 DEFB129Q9H1M3 183 aa10.28□□□□□ -0.76
MRPL55-211ENST00000366738 PCDHAC2Q9Y5I4 1007 aa10.28□□□□□ -0.76
MRPL55-211ENST00000366738 PTCH2Q9Y6C5 1203 aa10.28□□□□□ -0.76
MRPL55-211ENST00000366738 COL1A1P02452 1464 aaPredicted RBP10.28□□□□□ -0.76
MRPL55-211ENST00000366738 OTOFQ9HC10 1997 aa10.28□□□□□ -0.76
MRPL55-211ENST00000366738 ZSWIM8A7E2V4 1837 aa10.28□□□□□ -0.76
MRPL55-211ENST00000366738 DLL1O00548 723 aa10.27□□□□□ -0.77
MRPL55-211ENST00000366738 IPO8O15397 1037 aaKnown RBP10.27□□□□□ -0.77
MRPL55-211ENST00000366738 SP3Q02447 781 aa10.27□□□□□ -0.77
MRPL55-211ENST00000366738 MAP3K11Q16584 847 aa10.27□□□□□ -0.77
MRPL55-211ENST00000366738 SLC4A8Q2Y0W8 1093 aa10.27□□□□□ -0.77
MRPL55-211ENST00000366738 SLC9C1Q4G0N8 1177 aa10.27□□□□□ -0.77
MRPL55-211ENST00000366738 BEND3Q5T5X7 828 aa10.27□□□□□ -0.77
MRPL55-211ENST00000366738 FTSJ3Q8IY81 847 aaKnown RBP10.27□□□□□ -0.77
MRPL55-211ENST00000366738 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms