RNA–Protein interactions for RNA: ENSMUST00000139443.7

Hmgb1-208, Transcript of High mobility group protein B1, mousemouse

TSL 2 BASIC

Gene Hmgb1, Length 923 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-208ENSMUST00000139443 Fstl1Q62356 306 aa18.99■□□□□ 0.63
Hmgb1-208ENSMUST00000139443 CrkQ64010 304 aa18.99■□□□□ 0.63
Hmgb1-208ENSMUST00000139443 Sptlc3Q8BG54 563 aa18.99■□□□□ 0.63
Hmgb1-208ENSMUST00000139443 ParnQ8VDG3 624 aa18.99■□□□□ 0.63
Hmgb1-208ENSMUST00000139443 Prg3Q9JL95 222 aa18.99■□□□□ 0.63
Hmgb1-208ENSMUST00000139443 AfdnQ9QZQ1 1820 aaKnown RBP18.98■□□□□ 0.63
Hmgb1-208ENSMUST00000139443 Timm10P62073 90 aa18.98■□□□□ 0.63
Hmgb1-208ENSMUST00000139443 Slc7a3P70423 618 aa18.98■□□□□ 0.63
Hmgb1-208ENSMUST00000139443 Evi5P97366 809 aa18.98■□□□□ 0.63
Hmgb1-208ENSMUST00000139443 Map3k12Q60700 888 aa18.98■□□□□ 0.63
Hmgb1-208ENSMUST00000139443 NfkbibQ60778 359 aa18.98■□□□□ 0.63
Hmgb1-208ENSMUST00000139443 Epc2Q8C0I4 808 aa18.98■□□□□ 0.63
Hmgb1-208ENSMUST00000139443 Gm42688A0A0R3P9D1 673 aa18.97■□□□□ 0.63
Hmgb1-208ENSMUST00000139443 Prl7d1P04769 244 aa18.97■□□□□ 0.63
Hmgb1-208ENSMUST00000139443 Fgl2P12804 432 aa18.97■□□□□ 0.63
Hmgb1-208ENSMUST00000139443 OsbpQ3B7Z2 805 aa18.97■□□□□ 0.63
Hmgb1-208ENSMUST00000139443 Znf697Q569E7 569 aa18.97■□□□□ 0.63
Hmgb1-208ENSMUST00000139443 Nop58Q6DFW4 536 aaKnown RBP18.97■□□□□ 0.63
Hmgb1-208ENSMUST00000139443 Cog5Q8C0L8 829 aa18.97■□□□□ 0.63
Hmgb1-208ENSMUST00000139443 Ccdc142Q8CAI1 738 aa18.97■□□□□ 0.63
Hmgb1-208ENSMUST00000139443 B3galt4Q9Z0F0 371 aa18.97■□□□□ 0.63
Hmgb1-208ENSMUST00000139443 Ccne2Q9Z238 404 aa18.97■□□□□ 0.63
Hmgb1-208ENSMUST00000139443 Nphp3Q7TNH6 1325 aa18.97■□□□□ 0.63
Hmgb1-208ENSMUST00000139443 TsksO54887 585 aa18.96■□□□□ 0.63
Hmgb1-208ENSMUST00000139443 Secisbp2lQ6A098 1086 aaKnown RBP18.96■□□□□ 0.63
Hmgb1-208ENSMUST00000139443 Rbm15bQ6PHZ5 887 aaKnown RBP18.96■□□□□ 0.63
Hmgb1-208ENSMUST00000139443 SpidrQ8BGX7 933 aa18.96■□□□□ 0.63
Hmgb1-208ENSMUST00000139443 Tmem179Q8BHH9 233 aa18.96■□□□□ 0.63
Hmgb1-208ENSMUST00000139443 HdlbpQ8VDJ3 1268 aaKnown RBP18.96■□□□□ 0.63
Hmgb1-208ENSMUST00000139443 MycnP03966 462 aaKnown RBP18.95■□□□□ 0.62
Hmgb1-208ENSMUST00000139443 L3mbtl2P59178 703 aa18.95■□□□□ 0.62
Hmgb1-208ENSMUST00000139443 Pram1Q6BCL1 675 aa18.95■□□□□ 0.62
Hmgb1-208ENSMUST00000139443 Pxylp1Q8BHA9 480 aa18.95■□□□□ 0.62
Hmgb1-208ENSMUST00000139443 Edc3Q8K2D3 508 aaKnown RBP18.95■□□□□ 0.62
Hmgb1-208ENSMUST00000139443 Riok1Q922Q2 567 aa18.95■□□□□ 0.62
Hmgb1-208ENSMUST00000139443 Chd5A2A8L1 1946 aa18.94■□□□□ 0.62
Hmgb1-208ENSMUST00000139443 Zmynd8A2A484 1235 aaKnown RBP18.94■□□□□ 0.62
Hmgb1-208ENSMUST00000139443 UncxO08934 530 aa18.94■□□□□ 0.62
Hmgb1-208ENSMUST00000139443 Mctp2Q5RJH2 878 aa18.94■□□□□ 0.62
Hmgb1-208ENSMUST00000139443 Fam102bQ8BQS4 339 aa18.94■□□□□ 0.62
Hmgb1-208ENSMUST00000139443 Sirt2Q8VDQ8 389 aa18.94■□□□□ 0.62
Hmgb1-208ENSMUST00000139443 Ripk3Q9QZL0 486 aa18.94■□□□□ 0.62
Hmgb1-208ENSMUST00000139443 Scn10aQ6QIY3 1958 aa18.93■□□□□ 0.62
Hmgb1-208ENSMUST00000139443 Tm6sf1P58749 370 aa18.93■□□□□ 0.62
Hmgb1-208ENSMUST00000139443 Adamts19P59509 1210 aa18.93■□□□□ 0.62
Hmgb1-208ENSMUST00000139443 AsnsQ61024 561 aa18.93■□□□□ 0.62
Hmgb1-208ENSMUST00000139443 Tmem79Q9D709 391 aa18.93■□□□□ 0.62
Hmgb1-208ENSMUST00000139443 EhhadhQ9DBM2 718 aa18.93■□□□□ 0.62
Hmgb1-208ENSMUST00000139443 Abcc4E9Q236 1325 aa18.93■□□□□ 0.62
Hmgb1-208ENSMUST00000139443 Prss51A0A286YDY8 319 aa18.92■□□□□ 0.62
Hmgb1-208ENSMUST00000139443 Prpmp5E9PXN1 296 aa18.92■□□□□ 0.62
Hmgb1-208ENSMUST00000139443 LtbrP50284 415 aa18.92■□□□□ 0.62
Hmgb1-208ENSMUST00000139443 Psen2Q61144 448 aa18.92■□□□□ 0.62
Hmgb1-208ENSMUST00000139443 Nlrp9aQ66X03 949 aa18.92■□□□□ 0.62
Hmgb1-208ENSMUST00000139443 Tmod2Q9JKK7 351 aa18.92■□□□□ 0.62
Hmgb1-208ENSMUST00000139443 Gm3893E9Q1I1 302 aa18.91■□□□□ 0.62
Hmgb1-208ENSMUST00000139443 Abtb2Q7TQI7 1024 aa18.91■□□□□ 0.62
Hmgb1-208ENSMUST00000139443 Nphp1Q9QY53 687 aa18.91■□□□□ 0.62
Hmgb1-208ENSMUST00000139443 Aox4Q3TYQ9 1336 aa18.91■□□□□ 0.62
Hmgb1-208ENSMUST00000139443 Tuft1O08970 390 aa18.9■□□□□ 0.62
Hmgb1-208ENSMUST00000139443 Prkg1P0C605 671 aa18.9■□□□□ 0.62
Hmgb1-208ENSMUST00000139443 Fdx1P46656 188 aa18.9■□□□□ 0.62
Hmgb1-208ENSMUST00000139443 WasP70315 520 aa18.9■□□□□ 0.62
Hmgb1-208ENSMUST00000139443 Slc4a7Q8BTY2 1034 aa18.9■□□□□ 0.62
Hmgb1-208ENSMUST00000139443 Tmem266Q8BZB3 538 aa18.9■□□□□ 0.62
Hmgb1-208ENSMUST00000139443 Uba5Q8VE47 403 aa18.9■□□□□ 0.62
Hmgb1-208ENSMUST00000139443 Adam7O35227 789 aa18.89■□□□□ 0.61
Hmgb1-208ENSMUST00000139443 Mmp8O70138 465 aa18.89■□□□□ 0.61
Hmgb1-208ENSMUST00000139443 SfswapQ3USH5 945 aaKnown RBP18.89■□□□□ 0.61
Hmgb1-208ENSMUST00000139443 Asap2Q7SIG6 958 aa18.89■□□□□ 0.61
Hmgb1-208ENSMUST00000139443 Mboat7Q8CHK3 473 aa18.89■□□□□ 0.61
Hmgb1-208ENSMUST00000139443 Gbp7Q91Z40 638 aa18.89■□□□□ 0.61
Hmgb1-208ENSMUST00000139443 S1pr4Q9Z0L1 386 aa18.89■□□□□ 0.61
Hmgb1-208ENSMUST00000139443 Armc3A2AU72 881 aa18.88■□□□□ 0.61
Hmgb1-208ENSMUST00000139443 Washc4Q3UMB9 1173 aa18.88■□□□□ 0.61
Hmgb1-208ENSMUST00000139443 Tfcp2l1Q3UNW5 479 aa18.88■□□□□ 0.61
Hmgb1-208ENSMUST00000139443 Fam160b2Q80YR2 744 aa18.88■□□□□ 0.61
Hmgb1-208ENSMUST00000139443 4930504O13RikQ8C5Z9 145 aa18.88■□□□□ 0.61
Hmgb1-208ENSMUST00000139443 HnrnpuQ8VEK3 800 aaKnown RBP18.88■□□□□ 0.61
Hmgb1-208ENSMUST00000139443 Bcs1lQ9CZP5 418 aa18.88■□□□□ 0.61
Hmgb1-208ENSMUST00000139443 Nova2D3YVV7 556 aaKnown RBP18.87■□□□□ 0.61
Hmgb1-208ENSMUST00000139443 Slc4a1P04919 929 aa18.87■□□□□ 0.61
Hmgb1-208ENSMUST00000139443 Prl3d1P18121 224 aa18.87■□□□□ 0.61
Hmgb1-208ENSMUST00000139443 Stat5bP42232 786 aa18.87■□□□□ 0.61
Hmgb1-208ENSMUST00000139443 Tmprss11eQ5S248 423 aa18.87■□□□□ 0.61
Hmgb1-208ENSMUST00000139443 Senp5Q6NXL6 749 aa18.87■□□□□ 0.61
Hmgb1-208ENSMUST00000139443 Mapk4Q6P5G0 583 aa18.87■□□□□ 0.61
Hmgb1-208ENSMUST00000139443 Ireb2Q811J3 963 aaKnown RBP18.87■□□□□ 0.61
Hmgb1-208ENSMUST00000139443 Snap47Q8R570 413 aa18.87■□□□□ 0.61
Hmgb1-208ENSMUST00000139443 Myh3P13541 1940 aa18.86■□□□□ 0.61
Hmgb1-208ENSMUST00000139443 Npc1l1Q6T3U4 1333 aa18.86■□□□□ 0.61
Hmgb1-208ENSMUST00000139443 Col20a1Q923P0 1320 aa18.86■□□□□ 0.61
Hmgb1-208ENSMUST00000139443 L1camP11627 1260 aa18.86■□□□□ 0.61
Hmgb1-208ENSMUST00000139443 CnpP16330 420 aa18.86■□□□□ 0.61
Hmgb1-208ENSMUST00000139443 Gxylt1Q3UHH8 404 aa18.86■□□□□ 0.61
Hmgb1-208ENSMUST00000139443 Ccdc148Q6P5U8 527 aa18.86■□□□□ 0.61
Hmgb1-208ENSMUST00000139443 Ankrd13aQ80UP5 588 aa18.86■□□□□ 0.61
Hmgb1-208ENSMUST00000139443 Fam13aQ8BGI4 693 aa18.86■□□□□ 0.61
Hmgb1-208ENSMUST00000139443 Cfap69Q8BH53 942 aa18.86■□□□□ 0.61
Hmgb1-208ENSMUST00000139443 Sulf1Q8K007 870 aa18.86■□□□□ 0.61
Retrieved 100 of 22,080 RNA–protein pairs in 19.9 ms